New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5877063	94 (1.060)	8 (0.110)	6/198	NT	9.2%	intergenic (+29/+76)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	= 5877097	83 (1.170)					intergenic (+63/+42)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein

CTGCAGATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5876891‑5877063 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtaaacccgctcctacaGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGCGAACAGGCCGTTGGT  <  NC_002947/5877097‑5876951                                                                                                                                                                                                                                                                                                                                  CTGCAGATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCT                                                                                                                                                                            >  2:1886250/1‑150     attTCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAATGCCGAGTAAAACCCTTCGC                                                                                                                                                                        <  1:846571/147‑1     AGATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC                                                                                                                                                                        >  2:2071935/1‑150     AGATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC                                                                                                                                                                        >  1:990558/1‑150      GATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCG                                                                                                                                                                       >  1:1975228/1‑150       ATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCAGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGG                                                                                                                                                                      >  1:897961/1‑150       ATCACCAAATCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGG                                                                                                                                                                      >  2:284361/1‑150         CACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGT                                                                                                                                                                    >  2:1383172/1‑150         CACCAACACGGGGGAGCTCGAAGCGAAGATTATCGCTATCGTCGGGGTGGTGACCCACGGCCTGTTCGCGGTGCGGCCGGAGGGTGTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGT                                                                                                                                                                    <  2:1024190/150‑1          ACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTA                                                                                                                                                                   >  1:1516693/1‑150            CAACCCGGTGGAGCTGGTAGCGCAGATCAACGCCATCGTCGGCGCGGTCACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTCAAACCCTTCGCGGGGAAA                                                                                                                                                                 >  1:558498/1‑150            CAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAA                                                                                                                                                                 >  1:510903/1‑150            CAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAA                                                                                                                                                                 >  2:808152/1‑150            CAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGG                                                                                                                                                                     <  1:1497104/146‑1            CAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGG                                                                                                                                                                     >  2:1497104/1‑146            CAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGG                                                                                                                                                                      <  2:1440516/145‑1            CAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGG                                                                                                                                                                      >  1:1440516/1‑145             AACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAC                                                                                                                                                                <  2:1671402/150‑1             AACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAC                                                                                                                                                                <  1:2291455/150‑1             AACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAAC                                                                                                                                                                <  2:510903/150‑1               CCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCC                                                                                                                                                              <  2:2251368/150‑1                CCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGATCGCGGCGCGGCCGGCGGATCTGCTGCTGCTTGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCG                                                                                                                                                             >  1:1035044/1‑150                  GGTGGAGCTTGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCT                                                                                                                                                           <  2:966102/150‑1                   GTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACTCGCTC                                                                                                                                                          <  2:1516693/150‑1                   GTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTC                                                                                                                                                          <  2:2210220/150‑1                   GTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTC                                                                                                                                                          >  2:1274862/1‑150                     GGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGACGGCCGAGTAAAACCCTTCGCGGGTTTACCCGCgaag                                                                                                                                                        <  2:1297186/150‑5                       AGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                      <  2:327999/150‑1                            GAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGG                                                                                                                                                                      >  1:2017877/1‑129                            GAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGG                                                                                                                                                                      <  2:2017877/129‑1                                 GCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAGGGATCGCC                                                                                                                                            >  1:1053659/1‑150                                             CATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGC                                                                                                                                >  1:2138712/1‑150                                                            GACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACC                                                                                                                                                               <  1:514552/104‑1                                                            GACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACC                                                                                                                                                               >  2:514552/1‑104                                                               CAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTA                                                                                                               <  1:1695907/149‑1                                                               CAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTA                                                                                                               >  2:1695907/1‑149                                                                     CCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGG                                                                                                        <  2:1053659/150‑1                                                                     CCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGG                                                                                                        <  2:2138712/150‑1                                                                                                          GGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGG                                                                                                        >  1:2401532/1‑113                                                                                                          GGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGG                                                                                                        <  2:2401532/113‑1                                                                                                                                                      TTCGCGGGTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCG                       >  2:1503094/1‑150                                                                                                                                                          CGGGTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCC                   >  1:350205/1‑150                                                                                                                                                           GGGTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCG                  >  2:1425703/1‑150                                                                                                                                                            GGTAAACCCGCACCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTAACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGC                 <  1:1776229/150‑1                                                                                                                                                             GTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGCG                <  1:685487/150‑1                                                                                                                                                             GTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGCG                >  1:1586153/1‑150                                                                                                                                                             GTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCG                                                    <  1:507283/114‑1                                                                                                                                                             GTAAACCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCG                                                    >  2:507283/1‑114                                                                                                                                                                  CCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGCGAACAG           <  2:40183/150‑1                                                                                                                                                                  CCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGCGAACAG           >  2:1083454/1‑150                                                                                                                                                                  CCCGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGCGAACAG           <  2:2015099/150‑1                                                                                                                                                                    CGCTCCTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGCGAACAGGC         <  2:563349/150‑1                                                                                                                                                                         CTACAGGGATCGCCACGGTTCTAGGCCGGTGGGGTACCTTGTAGGAGCGGGGTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGCGAACAGGCCGTTG    <  1:1349967/150‑1                                                                                                                                                                         CTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTC                                                                   <  1:1386491/87‑1                                                                                                                                                                         CTACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTC                                                                   >  2:1386491/1‑87                                                                                                                                                                           ACAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGCGAACAGGCCGTTGGT  <  2:1361921/150‑1                                                                                                                                                                            CAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCG                                                    >  2:803365/1‑99                                                                                                                                                                            CAGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGAGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCG                                                    <  1:803365/99‑1                                                                                                                                                                                                                                                                                                                                  CTGCAGATCACCAACCCGGTGGAGCTGGAAGCGCAGATCAACGCCATCGTCGGCGTGGTGACCAACGGCCTGTTCGCGGCGCGGCCGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5876891‑5877063 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtaaacccgctcctacaGGGATCGCCACGGTTCCAGGCCGGTGGGGTACCTTGTAGGAGCGGGTTTACCCGCGAAGGGTTTTACTCGGCCTTCAGGCTCTTCACGCCTTCAGCGGTGCCCAGCAGCAGCAGATCCGCCGGCCGCGCCGCGAACAGGCCGTTGGT  <  NC_002947/5877097‑5876951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.