| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 5,914,029 | Δ78 bp | 18.9% | coding (1242‑1319/1377 nt) | spuI → | glutamylpolyamine synthetase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5914028 | 65 (0.730) | 16 (0.200) | 13/226 | NT | 18.9% | coding (1241/1377 nt) | spuI | glutamylpolyamine synthetase |
| ? | NC_002947 | 5914107 = | 78 (0.960) | coding (1320/1377 nt) | spuI | glutamylpolyamine synthetase | |||||
GACGCCAACCCGTACCTGATGATGGCTGCCGTACTGGCTGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5913871‑5914028‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgagctggaAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTT > NC_002947/5914107‑5914252 GACGCCAACCCGTACCTGATGATGGCTGCCGTACTGGCTGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGC > 2:2084612/1‑150 CAACCCGTACCTGATGATGGCTGCCGTACTGGCTGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCTGATCGAAGGCAACTCGTAAGAGAAGCTGGAACAGAACCTTCCGAACAACCTGCGCGATGCCCTGCGCGAGCT > 1:1364796/1‑150 CAACCCGTACCTGATGATGGCTGCCGTACTGGCTGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCT > 2:330847/1‑150 AACCCGTACCTGATGATGGCTGCCGTACTGGCTGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTG > 2:2170049/1‑150 caCGTACCTGATTATGGCTGCCGTACTGGCTGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGA < 1:409485/148‑1 CCCGTACCTGATGATGGCTGCCGTACTGGCTGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGA < 1:2084612/150‑1 GATGATGGCTGCCGTACTGGCTGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGA > 1:1010394/1‑150 GCTGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTC > 1:106410/1‑150 TGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGA < 2:106410/150‑1 GCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGT > 2:128407/1‑150 TGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCT < 2:479762/100‑1 TGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCT > 1:479762/1‑100 TGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCACCAGCGGCAGAGCCTGCCGAGCGGCCCGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGC > 1:902343/1‑150 AACAAAATCGAGCCAAGCGCGCCGACGTAAGGCAACTCGGACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGAGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACC > 2:1728512/1‑150 ACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCG > 1:1675303/1‑150 AAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTG > 2:2407505/1‑150 GGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCa < 2:407568/143‑2 GGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCT > 1:407568/1‑143 AACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGC < 1:128407/150‑1 CTGGAGCAGAGCCTGTCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTacacg < 2:1675303/150‑6 CCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCG > 1:1245798/1‑129 CCTGCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCG < 2:1245798/129‑1 GCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGC > 1:1145565/1‑150 GCGCGATGCCCTGCGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTCCGCGGCCCCGC < 2:1010394/150‑1 CGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGG < 2:1145565/150‑1 GCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTT > 2:1924971/1‑94 GCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTT < 1:1924971/94‑1 TGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTT > 1:1670930/1‑150 TGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTaca > 1:1249921/1‑99 TGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTaca < 2:1249921/102‑4 GACGCCAACCCGTACCTGATGATGGCTGCCGTACTGGCTGGCGTGCACCATGGCCTGACCAACAAGATCGAGCCAGGCGCGCCGATCGAAGGCAACTCGTACGAGCAGCTGGAGCAGAGCCTGCCGAACAACCTGCGCGATGCCCTGCGCGAGCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5913871‑5914028‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgagctggaAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTT > NC_002947/5914107‑5914252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |