New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 201085	66 (0.750)	7 (0.080)	5/238	NT	9.0%	coding (6591/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 201110	77 (0.900)					coding (6616/26049 nt)	PP_0168	putative surface adhesion protein

GTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAA  >  NC_002947/200936‑201234                                                                                                                                                      |                                                                                                                                                       gTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTG                                                                                                                                                        >  2:2024987‑M1/1‑150 (MQ=255)   tCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACAAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGAc                                                                                                                                                      <  1:552487/150‑1 (MQ=25)        tGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTAAGTCACCGAAGGCGGTGAGATTACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACg                                                                                                                                                 >  1:47681/1‑150 (MQ=21)                acCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACt                                                                                                                                         <  1:2280707/150‑1 (MQ=37)                  ccTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGa                                                                                                                                                       >  2:982856/1‑134 (MQ=37)                  ccTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGa                                                                                                                                                       <  1:982856/134‑1 (MQ=35)                  ccTCGACGAGGGGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTgt                                                                                                                                       >  2:1854656/1‑150 (MQ=38)                   cTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTgtc                                                                                                                                      <  1:2024987/150‑1 (MQ=38)                        cgaGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTcgtcgt                                                                                                                                 <  2:809519/150‑1 (MQ=38)                         gaGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAATGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTcgtcgtt                                                                                                                                <  1:696153/150‑2 (MQ=255)                         gaGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTg                                                                                                                                <  2:1337502/150‑1 (MQ=39)                         gaGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTg                                                                                                                                <  1:479138/150‑1 (MQ=38)                              ggtggCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGcagc                                                                                                                           >  1:1986785‑M2/1‑146 (MQ=255)                                   cGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGccacgacgacggtggtgccgtcggtcagcttgaa                                                                                                                      <  1:1569109‑M1/150‑35 (MQ=255)                                   cGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACa                                                                                                                      <  2:2118792/150‑1 (MQ=38)                                      aGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGca                                                                                                                   <  1:181411/150‑1 (MQ=38)                                                gACCTCCTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑Tc                                                                                                        <  2:382611/150‑1 (MQ=255)                                                   cccTTCAGTCACCGAAGGCGGTGAGACCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGcagc                                                                                                                           <  1:957688‑M2/129‑5 (MQ=255)                                                   cccTTCAGTCACCGAAGGCGGTGAGACCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGcagc                                                                                                                           >  2:957688‑M2/1‑125 (MQ=255)                                                      ttCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCAc                                                                                                  >  1:755924/1‑150 (MQ=255)                                                           tCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGccacgacgacagtggtgccgtcggtcagcttgaa                                                                                                                      >  1:1983927‑M1/1‑92 (MQ=255)                                                           tCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGccacgacgacagtggtgccgtcggtcagcttgaa                                                                                                                      <  2:1983927‑M1/126‑35 (MQ=255)                                                           tCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCAATCGGAGCTGTACTTCAAGCTGaccgacgacagtggtgccgtcg                                                                                                                                  <  1:1145653‑M1/114‑23 (MQ=255)                                                           tCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCAATCGGAGCTGTACTTCAAGCTGaccgacgacagtggtgccgtcg                                                                                                                                  >  2:1145653‑M1/1‑92 (MQ=255)                                                                           gaTCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGt                                                                             >  1:688248/1‑150 (MQ=39)                                                                            tcagccTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTc                                                                            >  1:1892547/5‑150 (MQ=255)                                                                             tCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGccacgacgacagtggtgccgtcggtca                                                                                                                             <  1:680367‑M1/101‑28 (MQ=255)                                                                             tCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGccacgacgacagtggtgccgtcggtca                                                                                                                             >  2:680367‑M1/1‑74 (MQ=255)                                                                             tCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGcagc                                                                                                                           <  2:433517‑M2/103‑5 (MQ=255)                                                                             tCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGcagc                                                                                                                           >  1:433517‑M2/1‑99 (MQ=255)                                                                                 cTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGt                                                                       >  2:865570/1‑150 (MQ=38)                                                                                 cTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGt                                                                       >  1:1336127/1‑150 (MQ=39)                                                                                 cTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGt                                                                       >  1:2226614/1‑150 (MQ=38)                                                                                       cATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGACACAAGC‑CCTTGGTCTTCAACCACTCCAACCGCACCAGACAACGTCTATGTCGGCAc                                                                 >  1:2340759/1‑150 (MQ=11)                                                                                       cATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACAACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCAc                                                                 >  1:345856/1‑150 (MQ=255)                                                                                        aTCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACt                                                                >  1:146630/1‑150 (MQ=38)                                                                                             ccTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAAc                                                                                                                       >  2:2189525/1‑91 (MQ=39)                                                                                             ccTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAAc                                                                                                                       <  1:2189525/91‑1 (MQ=39)                                                                                             ccTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATgc                                                           >  1:478115/1‑150 (MQ=255)                                                                                                 aCCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCg                                                       <  2:422319/150‑1 (MQ=255)                                                                                                   caacaaAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCggt                                                     >  1:1682502/1‑150 (MQ=255)                                                                                                    aacaaAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTgtcgt                                                                                                                                    >  1:1693350/1‑71 (MQ=40)                                                                                                    aacaaAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTgtcgt                                                                                                                                    <  2:1693350/71‑1 (MQ=39)                                                                                                    aacaaAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCggtg                                                    <  1:1154142/150‑1 (MQ=255)                                                                                                    aacaaAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCggtg                                                    >  2:2229377/1‑150 (MQ=255)                                                                                                    aacaaAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTCCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCggtg                                                    <  2:599255/150‑1 (MQ=255)                                                                                                       aaaGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTAt                                                                         <  1:20746/126‑1 (MQ=40)                                                                                                       aaaGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTAt                                                                         >  2:20746/1‑126 (MQ=39)                                                                                                           aTGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATg                                             >  2:2173216/1‑150 (MQ=255)                                                                                                              gTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCa                                          >  1:483953/1‑150 (MQ=255)                                                                                                              gTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCa                                          >  2:1498203/1‑150 (MQ=255)                                                                                                                cTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATc                                        <  1:865570/150‑1 (MQ=255)                                                                                                                      aTCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCggtg                                                    <  1:539742/132‑1 (MQ=255)                                                                                                                      aTCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCggtg                                                    >  2:539742/1‑132 (MQ=255)                                                                                                                       tCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCg                                 <  2:688248/150‑1 (MQ=255)                                                                                                                         aacaacCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTc                               >  1:2318577/1‑150 (MQ=255)                                                                                                                          acaacCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGa                                                                                   <  1:308886/97‑1 (MQ=37)                                                                                                                          acaacCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGa                                                                                   >  2:308886/1‑97 (MQ=37)                                                                                                                          acaacCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCa                              >  1:1372470/1‑150 (MQ=255)                                                                                                                          acaacCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCa                              >  1:321110/1‑150 (MQ=255)                                                                                                                           caacCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAg                             >  2:1344655/1‑150 (MQ=255)                                                                                                                            aacCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAgc                            >  1:585675/1‑150 (MQ=255)                                                                                                                            aacCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAgc                            >  1:2090697/1‑150 (MQ=255)                                                                                                                              ccACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTc                                                 >  1:396465/1‑127 (MQ=255)                                                                                                                              ccACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAgcgg                          >  1:1548932/1‑150 (MQ=255)                                                                                                                              ccACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAgcgg                          >  1:241345/1‑150 (MQ=255)                                                                                                                              ccACTAGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTc                                                 <  2:396465/127‑1 (MQ=255)                                                                                                                                  tCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCa                      >  2:614974/1‑150 (MQ=255)                                                                                                                                  ccGGAGCTGTACTTCAAGCTGACCGACGGCACAACTGTCGTCGTGGCAGACAAAAGGACCACGCGC‑TCGGCCATTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCa                      <  2:47681/149‑1 (MQ=14)                                                                                                                                    ggAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAAt                                              <  2:800478/124‑1 (MQ=255)                                                                                                                                    ggAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAAt                                              >  1:800478/1‑124 (MQ=255)                                                                                                                                    ggAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGa                    >  2:1067606/1‑150 (MQ=255)                                                                                                                                         tGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTa                                                                          >  1:168538/1‑91 (MQ=34)                                                                                                                                         tGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTa                                                                          <  2:168538/91‑1 (MQ=34)                                                                                                                                         tGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGt               <  1:2229377/150‑1 (MQ=255)                                                                                                                                          gTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTg              <  1:2173216/150‑1 (MQ=255)                                                                                                                                          gTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTg              <  2:483953/150‑1 (MQ=255)                                                                                                                                              ttCAAGCTGACCGACGGCACCACTGTCGTCGTGGcagcttgaagtacagctccgagtggttgttgatcggcagaccatctttgttggtcagggtgatggtgtaggtgatctcaccgccttcggtga                                   >  1:1983927‑M2/1‑34 (MQ=255)                                                                                                                                              ttCAAGCTGACCGACGGCACCACTGTCGTCGTGGcagcttgaagtacagctccgagtggttgttgatcggcagaccatctttgttggtcagggtgatggtgtaggtgatctcaccgccttcggtga                                   <  2:1983927‑M2/126‑93 (MQ=255)                                                                                                                                              ttCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATc                                        >  2:2404708/1‑120 (MQ=255)                                                                                                                                              ttCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATc                                        <  1:2404708/120‑1 (MQ=255)                                                                                                                                              ttCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAg          >  2:2035898/1‑150 (MQ=255)                                                                                                                                              ttCAAGCTGACCGACGGCACCACCGTCGTCGTGGcagcttgaagtacagctccgagtggttgttgatcggcagaccgtctttgttggtcagggtgatggtgtaggtgatctcaccgccttcggtgaccgaaggggtcgcggtcagcttcg           <  1:1569109‑M2/150‑117 (MQ=255)                                                                                                                                               tCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGt         <  2:2090697/150‑1 (MQ=255)                                                                                                                                                cAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGtt        <  2:585675/150‑1 (MQ=255)                                                                                                                                                   gCTGccacgacgacagtggtgccgtcggtcagcttgaagtacagctccgagtggttgttgatcggcagaccatctttgttggtcagggtgatggtgtaggtggtctcaccgccttcggtgactgaaggg                           <  1:957688‑M1/129‑126 (MQ=255)                                                                                                                                                   gCTGccacgacgacagtggtgccgtcggtcagcttgaagtacagctccgagtggttgttgatcggcagaccatctttgttggtcagggtgatggtgtaggtggtctcaccgccttcggtgactgaaggg                           >  2:957688‑M1/1‑4 (MQ=255)                                                                                                                                                   gCTGccacgacgacagtggtgccgtcggtcagcttgaagtacagctccgagtggttgttgatcggcagaccatctttgttggtcagggtgatggtgtaggtgatctcaccgccttcggtgactgaaggggtcgcggtcagcttcgccacc      >  1:1986785‑M1/1‑4 (MQ=255)                                                                                                                                                   gCTGccacgacgacagtggtgccgtcggtcagcttgaagtacagctccgagtggttgttgatcggcagaccatctttgttggtcagggtgatggtgtaggtga                                                     <  2:433517‑M1/103‑100 (MQ=255)                                                                                                                                                   gCTGccacgacgacagtggtgccgtcggtcagcttgaagtacagctccgagtggttgttgatcggcagaccatctttgttggtcagggtgatggtgtaggtga                                                     >  1:433517‑M1/1‑4 (MQ=255)                                                                                                                                                   gCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGa     >  1:1279930/1‑150 (MQ=255)                                                                                                                                                   gCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGa     <  1:2035898/150‑1 (MQ=255)                                                                                                                                                   gCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGa     >  2:1283202/1‑150 (MQ=255)                                                                                                                                                     tGACCGACGGCACCACTGTCGTCGTGGcagcttgaagtacagctccgagtggttgttgatcggcagaccatctttgttggtcagggtgatggtgtaggtga                                                     >  2:680367‑M2/1‑27 (MQ=255)                                                                                                                                                     tGACCGACGGCACCACTGTCGTCGTGGcagcttgaagtacagctccgagtggttgttgatcggcagaccatctttgttggtcagggtgatggtgtaggtga                                                     <  1:680367‑M2/101‑75 (MQ=255)                                                                                                                                                     tGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGt                                                                             >  2:1714199/1‑76 (MQ=35)                                                                                                                                                     tGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGt                                                                             <  1:1714199/76‑1 (MQ=35)                                                                                                                                                      gACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGaaaa  >  2:1286714/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                       GTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACTGTCGTCGTGGCAGCCAACAGCACCACGGGC‑TCGGCCACTGCAACCGCACCAGACAACGTCTATGTCGGCACTAATGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAA  >  NC_002947/200936‑201234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.