New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 353061 =96 (1.080)18 (0.270) 15/188 NT 21.5% intergenic (+25/+93) hisF/cbcV imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
?NC_002947 353133 = 58 (0.860)intergenic (+97/+21) hisF/cbcV imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein

Only 100 of 135 total aligned reads displayed.

GACGGCATTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATC  >  NC_002947/352917‑353208
                                                                                                                                                |                                                                                                                                                    
gACGGCATTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCtt                                                                                                                                                 >  2:1261737/1‑150 (MQ=255)
   ggCATTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTcgc                                                                                                                                              <  2:101347/150‑1 (MQ=255)
     cATTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCgg                                                                                                                                            <  1:179495/150‑1 (MQ=255)
       tgcagattcgttatcaaaccggcaacaagctggtgctgcaggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGc                                                                                                                                          <  1:2027010‑M1/13‑1 (MQ=255)
         cagattcgttatcaaaccggcaacaagctggtgctgcaggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCAc                                                                                                                                        >  2:876909‑M1/136‑150 (MQ=255)
           ggAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGcgtgc                                                                                                                                      <  2:892988/150‑5 (MQ=255)
           ggAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGc                                                                                                                                      >  2:2340607/1‑150 (MQ=255)
           ggAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGc                                                                                                                                      <  1:1590479/150‑1 (MQ=255)
            gAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGcc                                                                                                                                     >  2:334689/1‑150 (MQ=255)
            attcgttatcaaaccggcaacaagctggtgctgcaggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattagggccgcttcgcgGCCCTTCGCGGGCACGcc                                                                                                                                     <  1:1743842‑M1/18‑1 (MQ=255)
             aaGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGccc                                                                                                                                    <  1:1511300/150‑1 (MQ=255)
             aaGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGccc                                                                                                                                    >  2:2119663/1‑150 (MQ=255)
                gttatcaaaccggcaacaagctggtgctgcaggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCt                                                                                                                                 <  1:1960646‑M1/22‑1 (MQ=255)
                gttatcaaaccggcaacaagctggtgctgcaggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCt                                                                                                                                 <  1:1505084‑M1/22‑1 (MQ=255)
                 gCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑c                                                                                                                               >  1:2216694/1‑150 (MQ=255)
                  cATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCTCCTTTGGCGGCCTCTCAGTGCCTTGGTCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCCTTGACCGGCCCAGCTTTGCATCCCTTAGCAGGGACGTCctcttc                                                                                                                               <  2:1728765/150‑3 (MQ=255)
                   aTGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑ccc                                                                                                                             >  2:1987362/1‑150 (MQ=255)
                   aTGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑ccc                                                                                                                             <  2:8351/150‑1 (MQ=255)
                   aTGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCAATTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑ccc                                                                                                                             >  1:1396862/1‑150 (MQ=255)
                    tGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCca                                                                                                                            >  1:853380/1‑150 (MQ=255)
                      ccAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCcaca                                                                                                                          >  2:1277515/1‑150 (MQ=255)
                      ccAGCGCGGTGATGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCcaca                                                                                                                          >  2:2394297/1‑150 (MQ=255)
                      aaaccggcaacaagctggtgctgcaggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggatgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCcaca                                                                                                                          <  1:1729050‑M1/28‑1 (MQ=255)
                       cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAg                                                                                                                         <  1:1801173/150‑1 (MQ=255)
                       cAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAg                                                                                                                         <  1:1058966/150‑1 (MQ=255)
                       aaccggcaacaagctggtgctgcaggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAg                                                                                                                         <  1:444386‑M1/29‑1 (MQ=255)
                       aaccggcaacaagctggtgctgcaggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAg                                                                                                                         >  2:800523‑M1/122‑150 (MQ=255)
                       aaccggcaacaagctggtgctgcaggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggcagcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAg                                                                                                                         <  1:143736‑M1/29‑1 (MQ=255)
                         gcgcGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAgag                                                                                                                       >  1:1085826/1‑148 (MQ=255)
                         ccggcaacaagctggtgctgcaggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCt                                                                                                                                 <  2:959997‑M1/22‑1 (MQ=255)
                               tGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTg                                                                                                                 >  2:833809/1‑150 (MQ=255)
                                gCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTga                                                                                                                <  2:1449351/150‑1 (MQ=255)
                                  tGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCCACCTACCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTgaga                                                                                                              >  1:126132/1‑150 (MQ=255)
                                      ggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGAtctc                                                                                                          >  2:911523/1‑150 (MQ=255)
                                                ttCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCg                                                                                                >  1:2360329/1‑150 (MQ=255)
                                                  ccACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCggg                                                                                              >  2:2027010/1‑150 (MQ=255)
                                                     cTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAg                                                                                                                         <  1:1617390/120‑1 (MQ=255)
                                                     cTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAg                                                                                                                         >  2:1617390/1‑120 (MQ=255)
                                                      tttGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTg                                                                                          <  1:1221640/150‑1 (MQ=255)
                                                      gacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTgg                                                                                                     >  1:660459‑M1/91‑139 (MQ=255)
                                                      gacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTgg                                                                                                     <  2:660459‑M1/49‑1 (MQ=255)
                                                             tggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGCTCTCTGTGGGAGCGGGc                                                                                             >  2:713290‑M1/84‑140 (MQ=255)
                                                                    aGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCcg                                                                            >  1:2359121/1‑150 (MQ=255)
                                                                         tcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTgg                                                                                                     <  1:94233‑M1/49‑1 (MQ=255)
                                                                         tcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTgg                                                                                                     >  2:94233‑M1/72‑120 (MQ=255)
                                                                         cGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAg                                                                       >  1:779016/1‑150 (MQ=255)
                                                                          ggAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGc                                                                      >  1:1865937/1‑150 (MQ=255)
                                                                            gggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgctttgcaGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCgg                                                                    >  1:688041‑M1/69‑150 (MQ=255)
                                                                               ccAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGccc                                                                 <  2:2216694/150‑1 (MQ=255)
                                                                               ccAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGccc                                                                 <  2:1427407/150‑1 (MQ=255)
                                                                                   cgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAgg                                                                                                                        >  2:278094‑M1/62‑91 (MQ=255)
                                                                                   cgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAgg                                                                                                                        <  1:278094‑M1/30‑1 (MQ=255)
                                                                                   cgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCtgt                                                                                                       >  2:1773272‑M1/62‑108 (MQ=255)
                                                                                   cgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCtgt                                                                                                       <  1:1773272‑M1/47‑1 (MQ=255)
                                                                                    gCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAAtt                                                            <  1:1277515/150‑1 (MQ=255)
                                                                                       tACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGt                                                                                           >  1:1529592/1‑116 (MQ=255)
                                                                                       tACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGt                                                                                           <  2:1529592/116‑1 (MQ=255)
                                                                                        tttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGa                                                                                                   >  2:920096‑M1/57‑107 (MQ=255)
                                                                                        tttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGa                                                                                                   <  1:920096‑M1/51‑1 (MQ=255)
                                                                                          aTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGc                                                                                                                   >  2:1302160/1‑89 (MQ=255)
                                                                                          aTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGc                                                                                                                   <  1:1302160/89‑1 (MQ=255)
                                                                                          aTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGc                                                                                             <  2:383169/111‑1 (MQ=255)
                                                                                          aTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGc                                                                                             >  1:383169/1‑111 (MQ=255)
                                                                                          aTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCa                                                      >  2:1531794/1‑150 (MQ=255)
                                                                                               ttCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTTCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGGGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGt                                                 <  2:2398966/150‑1 (MQ=255)
                                                                                               ttCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGaa                                                                        <  1:1524934/127‑1 (MQ=255)
                                                                                               ttCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGaa                                                                        >  2:1524934/1‑127 (MQ=255)
                                                                                                    tgctcggcaagaaccacggttgaagcaattggggctgctttgcaGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGcc                                                                  <  2:1810202‑M1/84‑1 (MQ=255)
                                                                                                    gcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCaa                                                     <  2:2196006/141‑1 (MQ=255)
                                                                                                    gcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCaa                                                     >  1:2196006/1‑141 (MQ=255)
                                                                                                        gATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGt                                                                                                                       <  1:1528888/71‑1 (MQ=255)
                                                                                                            gtcgtTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGTGGGCACGCCCGCT‑CCCACAg                                                                                                                         >  1:1856411/1‑65 (MQ=255)
                                                                                                            gtcgtTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAg                                                                                                                         <  2:1856411/65‑1 (MQ=255)
                                                                                                                ttCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGc                                                          <  2:455985/124‑1 (MQ=255)
                                                                                                                ttCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGagcagc                                >  2:646555/1‑150 (MQ=255)
                                                                                                                   gCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGcgcg                             >  1:815563/1‑150 (MQ=255)
                                                                                                                    cTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGt                            >  1:1877591/1‑150 (MQ=255)
                                                                                                                      gATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTgg                          <  1:911523/150‑1 (MQ=255)
                                                                                                                       aTCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGc                                                                                                                                  >  1:482511/1‑46 (MQ=255)
                                                                                                                       aTCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGc                                                                                                                                  <  2:482511/46‑1 (MQ=255)
                                                                                                                       aTCCATTGACCGGGGCTCGGTTGCGGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGt                         >  2:1792214/1‑150 (MQ=255)
                                                                                                                          cATTGACCGGGGCTGCTTTGCAGCCTTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTaaa                      <  2:2360329/150‑1 (MQ=255)
                                                                                                                          cATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTaaa                      <  2:1180494/150‑1 (MQ=255)
                                                                                                                           aTTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAg                     <  2:779016/150‑1 (MQ=255)
                                                                                                                              gACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTc                  <  1:1987362/150‑1 (MQ=255)
                                                                                                                              gACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTc                  >  1:1117145/1‑150 (MQ=255)
                                                                                                                               aCCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                 <  2:1865937/150‑1 (MQ=255)
                                                                                                                               aCCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                 <  1:2119663/150‑1 (MQ=255)
                                                                                                                               aCCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                 <  1:475848/150‑1 (MQ=255)
                                                                                                                               aCCGGGGCTGCTTTGCAGCCCTTCGCGGGAACGTGATCTGCCGTCTGCCGTGGT‑AGAGCTCTGTGGGAGCGGGACTGCGCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                 <  1:2340607/150‑1 (MQ=255)
                                                                                                                                    ggccgcaacgcgGCCCTTCGCGGGCACGCCCGCT‑CCcaca                                                                                                                          <  1:1190289‑M1/28‑1 (MQ=255)
                                                                                                                                        gcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCgg                                                                                               >  2:1889994‑M1/9‑63 (MQ=255)
                                                                                                                                        gcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGc                                                                                         <  1:1585965‑M1/61‑1 (MQ=255)
                                                                                                                                        gcttcgcgGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGc                                                                                         >  2:1585965‑M1/9‑69 (MQ=255)
                                                                                                                                        gctTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                 <  1:985935/141‑1 (MQ=255)
                                                                                                                                         ctTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGa       <  2:2359121/150‑1 (MQ=255)
                                                                                                                                          tttGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAg      >  2:470533/1‑150 (MQ=255)
                                                                                                                                          aaagCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                 <  2:687469/136‑1 (MQ=255)
                                                                                                                                          aaagCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg                 >  1:687469/4‑139 (MQ=255)
                                                                                                                                              cAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATc  <  2:1585931/150‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
GACGGCATTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCT‑CCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATC  >  NC_002947/352917‑353208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.