New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1149908 =74 (0.840)11 (0.130) 7/238 NT 13.5% intergenic (‑149/+108) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
?NC_002947 1150021 = 69 (0.810)coding (997/1002 nt) gapA glyceraldehyde‑3‑phosphate dehydrogenase

Only 100 of 112 total aligned reads displayed.

GGGGACCTGGCCGACGAAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGC  >  NC_002947/1149762‑1150052
                                                                                                                                                  |                                                                                                                                                 
ggggACCTGGCCGACGAAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGCGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCtt                                                                                                                                                >  2:1417975/1‑149 (MQ=255)
 gggACCTGGCCGACGAAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTgg                                                                                                                                               <  2:450786/150‑1 (MQ=255)
  ggACCTGGCCGACGAAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTgaa                                                                                                                                              <  2:1429882/150‑3 (MQ=255)
  ggACCTGGCCGACGAAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGgc                                                                                                                                              <  1:1805026/150‑1 (MQ=255)
        acaacccgctgtcgtcgatcttcgatgccaaccatacccgggccaacgggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggct                                                                                                                                                 >  1:1420435‑M1/139‑141 (MQ=255)
        acaacccgctgtcgtcgatcttcgatgccaaccatacccgggccaacgggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggct                                                                                                                                                 <  2:1420435‑M1/3‑1 (MQ=255)
         gCCGACGAAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATcc                                                                                                                                       <  1:394319/150‑1 (MQ=255)
             acgaAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGTGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑gg                                                                                                                                  <  1:1163440/150‑1 (MQ=255)
             acgaAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑gg                                                                                                                                  <  1:2144108/150‑1 (MQ=255)
               gAAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGG                                                                                                                                <  1:1868893‑M1/150‑1 (MQ=255)
                    gTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCG                                                                                                                           >  2:2062940‑M1/1‑150 (MQ=255)
                          gATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGGAGCGGGCtt                                                                                                                      >  2:1775033/1‑150 (MQ=255)
                          gATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTg                                                                                                                     >  1:382782/1‑150 (MQ=255)
                            tAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCCACCCCAGCTACAACCACGGCACAGGGCAGTCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGcc                                                                                                                   <  1:285580/150‑1 (MQ=12)
                             aaTGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCt                                                                                                                                                 >  2:1918766/1‑120 (MQ=255)
                             aaTGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCt                                                                                                                                                 <  1:1918766/120‑1 (MQ=255)
                                 cTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGC                                                                                                                            <  2:1540146‑M1/136‑1 (MQ=255)
                                 cTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGC                                                                                                                            >  1:1540146‑M1/1‑136 (MQ=255)
                                  ttATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGaa                                                                                                             >  1:1620026/1‑150 (MQ=255)
                                  ttATCATCCGTGCGGCAAGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTTCCCGCGaa                                                                                                             >  1:1179952/1‑150 (MQ=255)
                                   tATCATCCGTGCGGCAGGTCAAGGGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCAAGCCcgctccc                                                                                                            <  2:1151019/150‑5 (MQ=37)
                                       agccGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACgg                                                                                                        >  2:1610940/3‑150 (MQ=255)
                                        tcCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCcgc                                                                                                                <  2:810800/141‑1 (MQ=255)
                                        tcCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACggg                                                                                                       <  1:661661/150‑1 (MQ=255)
                                         ccGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGc                                                                                                      <  2:1439520/150‑1 (MQ=255)
                                         ccGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGc                                                                                                      <  1:1814108/150‑1 (MQ=255)
                                           gTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATc                                                                                                                                        <  2:575975/115‑1 (MQ=255)
                                           gTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATc                                                                                                                                        >  1:575975/1‑115 (MQ=255)
                                            tGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAACAGATGGCGCGATCCCT‑GGGGGCGCCGGCTTGCCCGCGAACACGGGGGaa                                                                                                   <  2:94941/150‑1 (MQ=38)
                                             ccgggccaacgggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGACGCGACCCGT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAg                                                                                                  <  1:958302‑M1/49‑1 (MQ=255)
                                                       aaGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGACCCGT‑GTGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggc                                                                                        >  2:2323386‑M1/1‑116 (MQ=255)
                                                         gtgtGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATcc                                                                                      <  1:2205402/150‑1 (MQ=255)
                                                         gcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggc                                                                                                                                                  >  1:1221737‑M1/90‑91 (MQ=255)
                                                         gcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggc                                                                                                                                                  <  2:1221737‑M1/2‑1 (MQ=255)
                                                               aaTTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTGTTGCTCAATTGCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCCAACACTCAGGACGCCGGTGCCATCCACCACg                                                                                >  1:125910/1‑150 (MQ=25)
                                                                aTTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACgg                                                                               <  1:2062940/150‑1 (MQ=255)
                                                                 ttATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGgt                                                                              >  2:1824518/1‑150 (MQ=255)
                                                                    tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCtt                                                                                                                      <  2:1443143/107‑1 (MQ=255)
                                                                    tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCtt                                                                                                                      >  1:1443143/1‑107 (MQ=255)
                                                                     cAGGAAAAGGTAAAGATTGTAGTCACTGGATGCAGTTCGCCTCATCAGCTAGCTACTGTTGTGCTCAATTTCTAACAGCGGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTg                                                                          <  1:542076/150‑1 (MQ=17)
                                                                             ggTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGgcttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcg                                                                  <  2:1993211‑M1/150‑57 (MQ=255)
                                                                              gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgg                                                                 >  1:351104‑M1/1‑93 (MQ=255)
                                                                              gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                           <  2:2189223/140‑1 (MQ=255)
                                                                              gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGtt                                                                           >  1:2189223/1‑140 (MQ=255)
                                                                              gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                 >  1:1094394/1‑150 (MQ=255)
                                                                              gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                 >  2:2049961/1‑150 (MQ=255)
                                                                              gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                 <  1:1610940/150‑1 (MQ=255)
                                                                              gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGATCGCAACTTTGTTGATCTATTTTTAAAAGCTGGCGCGATCACT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATACACCACGGTATTGGCttggtgg                                                                 >  2:83977/1‑145 (MQ=18)
                                                                              ctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGACGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                 >  1:2362992‑M1/69‑150 (MQ=255)
                                                                              ctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGACGCGACCCGT‑GTGGGAGCGGCCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                 >  1:95482‑M1/69‑150 (MQ=255)
                                                                                aaaGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGc                                                               >  2:1249938/1‑150 (MQ=255)
                                                                                 aaGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCa                                                              >  1:311329/1‑150 (MQ=255)
                                                                                    aTTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGACCCGT‑GTGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagc                                                           <  1:2323386‑M1/150‑64 (MQ=255)
                                                                                     gacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                          >  1:135328‑M1/62‑150 (MQ=255)
                                                                                      tGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgggcaagccc                                                         <  2:351104‑M1/150‑66 (MQ=255)
                                                                                      acaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGACGCGACCCGT‑GTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                 <  1:1472301‑M1/82‑1 (MQ=255)
                                                                                      acaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGACGCGACCCGT‑GTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                 >  2:1472301‑M1/61‑142 (MQ=255)
                                                                                           tCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGccgctcc                                                    >  1:1824518‑M2/1‑143 (MQ=255)
                                                                                               tGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCcaca                                                <  1:2049961/150‑1 (MQ=255)
                                                                                                  gtGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTTCTCAATTTCTGCGACCTGGCGCGATCCCT‑GGGGGAGCGGGGTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                             <  1:264647/149‑1 (MQ=21)
                                                                                                   gttcagcaaccggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACggg                                            <  1:1190760‑M1/103‑1 (MQ=255)
                                                                                                      cGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcg                                         >  1:809105/1‑150 (MQ=255)
                                                                                                       gTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                        <  1:1991063/150‑1 (MQ=255)
                                                                                                         ttGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGt                                      <  2:1007034/150‑1 (MQ=255)
                                                                                                         ttGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGt                                      <  1:1249938/150‑1 (MQ=255)
                                                                                                          tGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTc                                     >  2:1779702/1‑150 (MQ=255)
                                                                                                           gCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTca                                    >  1:735638/1‑150 (MQ=255)
                                                                                                           accggatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTca                                    >  2:1535524‑M1/40‑150 (MQ=255)
                                                                                                             tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                  <  2:2262272/134‑1 (MQ=255)
                                                                                                             tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                  >  1:2262272/1‑134 (MQ=255)
                                                                                                             tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCAGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagc                                  >  2:597211/1‑150 (MQ=255)
                                                                                                               gatgctggacaactgcctggcgctgcaccgggctgGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagcca                                >  2:1107008‑M1/36‑150 (MQ=255)
                                                                                                                      gAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGc                                                                                                      <  2:4466/73‑1 (MQ=39)
                                                                                                                      gAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGc                                                                                                      >  1:4466/1‑73 (MQ=39)
                                                                                                                        gCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGGCCGGTGc                       >  1:962297/1‑150 (MQ=255)
                                                                                                                         cAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCa                      <  2:311329/150‑1 (MQ=255)
                                                                                                                           aCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgg                                                                 >  1:1657525‑M1/1‑48 (MQ=255)
                                                                                                                           aCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGccttgcccgcgaagccaacaccgtggtggatggcacgggcttcgcccgtgttcgcgg                                                                 <  2:1657525‑M1/105‑58 (MQ=255)
                                                                                                                            cTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                          >  1:1149113‑M2/1‑110 (MQ=255)
                                                                                                                            cTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                          <  2:1149113‑M2/111‑2 (MQ=255)
                                                                                                                             tGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGGCCGCGAACACGGGCGAAGCCCGTGCCATCTACCACGGGCGTGTCTTCGCGGGCAAGGCCGCTCCCCCACGGGTCGCGTCAGCCAGCCCGGTGCAgcgc                  >  2:1882815/1‑150 (MQ=21)
                                                                                                                             tGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgcgc                  >  2:2075331/1‑150 (MQ=255)
                                                                                                                              gTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGcc                 >  1:1631025/1‑150 (MQ=255)
                                                                                                                               tCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                  <  2:376894/116‑1 (MQ=255)
                                                                                                                               tCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                  >  1:376894/1‑116 (MQ=255)
                                                                                                                                cTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAg               <  2:1094394/150‑1 (MQ=255)
                                                                                                                                     tCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGgtgt                                                                            >  2:477949/1‑84 (MQ=255)
                                                                                                                                     tCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgc                    >  1:2273020/1‑140 (MQ=255)
                                                                                                                                      cAATTTCTAAAAGCTGGCGCGCTCCCT‑GGGGGAGCGGGCTCGACCGCAAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGtt         <  1:519256/150‑1 (MQ=255)
                                                                                                                                      cAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGtt         <  2:382782/150‑1 (MQ=255)
                                                                                                                                         tttCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagcca                                <  1:897793/124‑1 (MQ=255)
                                                                                                                                         tttCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTcagcca                                >  2:897793/1‑124 (MQ=255)
                                                                                                                                          ttCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTc                                          <  1:772967/113‑1 (MQ=255)
                                                                                                                                          ttCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTc                                          >  2:772967/1‑113 (MQ=255)
                                                                                                                                           tCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGTCAGTTGTCCa    <  2:532031/150‑1 (MQ=255)
                                                                                                                                           tCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa    <  1:1417975/150‑1 (MQ=255)
                                                                                                                                           tCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa    <  2:1620026/150‑1 (MQ=255)
                                                                                                                                           tCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa    <  1:1779702/150‑1 (MQ=255)
                                                                                                                                           tCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa    <  2:125910/150‑1 (MQ=255)
                                                                                                                                             tAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGGCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGc  >  1:740881/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
GGGGACCTGGCCGACGAAAGGTTAATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCT‑GGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGC  >  NC_002947/1149762‑1150052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.