| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2301497 | 44 (0.500) | 47 (0.540) | 39/242 | NT | 52.1% | intergenic (‑98/‑233) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
| ? | NC_002947 | 5545369 = | NA (NA) | intergenic (‑461/+416) | rpsF/rlmB | 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB | |||||
Only 100 of 176 total aligned reads displayed.
GGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAT > NC_002947/2301348‑2301644 | attgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc < 1:1553688‑M1/5‑1 (MQ=255) attgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc < 2:1446413‑M1/5‑1 (MQ=255) attgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc > 2:1359824‑M1/146‑150 (MQ=255) attgggaaccatagcaaagtattcggcggctgacctaaccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc > 2:795762‑M1/146‑150 (MQ=255) ccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatct < 1:1483520‑M1/2‑1 (MQ=255) tttGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGGACTg > 2:917467/1‑150 (MQ=255) catagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTg < 2:2190933‑M1/14‑1 (MQ=255) ttGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaa < 2:2303966‑M1/150‑14 (MQ=255) tGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTgcg < 1:183945/150‑1 (MQ=255) ccAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATc > 2:744764/1‑150 (MQ=255) aaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc > 2:358115‑M1/131‑135 (MQ=255) aaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc < 1:358115‑M1/5‑1 (MQ=255) ggCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTa < 2:2100030/149‑1 (MQ=255) attcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgaagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTa < 2:585866‑M1/25‑1 (MQ=255) ggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc > 1:252734‑M1/122‑126 (MQ=255) ggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcatgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc > 1:1512031‑M1/122‑126 (MQ=255) aGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCAGGCAAGCCAGCGCTCATAGAACTGGGAATTAGTTACTGa > 2:1000506/1‑150 (MQ=255) gTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgtt > 2:1448630‑M1/1‑122 (MQ=255) ggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc > 2:1366747‑M1/119‑121 (MQ=255) ggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc < 1:1366747‑M1/3‑1 (MQ=255) cGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGAttt < 1:917467/150‑1 (MQ=255) ggAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctt > 2:1823062‑M1/1‑119 (MQ=255) ggAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGa < 1:1199632/146‑1 (MQ=255) gAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttcttt > 1:650005‑M1/1‑118 (MQ=255) gAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaa > 1:2374180‑M1/1‑118 (MQ=255) tATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctag < 2:650005‑M1/150‑37 (MQ=255) tATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctag < 2:1809124‑M1/150‑37 (MQ=255) tATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctag < 1:770684‑M1/150‑37 (MQ=255) tGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGa > 2:2015419/1‑150 (MQ=255) aacaCAGACTTATGGATGACGCGTTGGGGTCGAGTCGCATAAGCGGGGAAACGGCCGGAGTGTATCCCTAGCGTTGGGCCGCTTCGCCGCCCGATAGAGTGCAAATCAGCTCTCATAGGACTATGCACCACTTACTGATTTAGCAGGGat < 2:1088884/147‑2 (MQ=255) cAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCtg < 2:2044360/150‑1 (MQ=255) tcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGagt < 1:2012830‑M1/52‑2 (MQ=255) ggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc < 1:1401766‑M1/3‑1 (MQ=255) gACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcgg < 1:2167243‑M1/150‑57 (MQ=255) gACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCCGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGcac < 1:1000506/150‑3 (MQ=255) ccTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGAtt > 1:2006649/1‑121 (MQ=255) ccTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGAtt < 2:2006649/121‑1 (MQ=255) gcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctggatgatCTCTCATAGAACTCCGCCTCACTTACTGATTTAGCAGAGACCCTGTGTGAGCGGgcgttcc < 2:758720‑M1/61‑4 (MQ=255) cTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggt < 1:1581578‑M1/150‑60 (MQ=255) ttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTa < 1:1767365‑M1/25‑1 (MQ=255) ttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTa > 2:1767365‑M1/88‑112 (MQ=255) tgtCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATa > 1:2079997/1‑90 (MQ=255) tagatctcgatgtcagtgcagatctgacgtcatgcgcatcatgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCa > 2:732994‑M1/83‑100 (MQ=255) tagatctcgatgtcagtgcagatctgacgtcatgcgcatcatgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCa < 1:732994‑M1/18‑1 (MQ=255) atctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAt < 2:1607637‑M1/71‑1 (MQ=255) gAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTCACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATc < 2:1980379/150‑1 (MQ=255) gTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTAc < 2:1466816/102‑1 (MQ=255) gTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTAc > 1:1466816/1‑102 (MQ=255) gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctct < 1:2210235‑M1/4‑1 (MQ=255) gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctct > 2:2210235‑M1/75‑78 (MQ=255) aaGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttca < 1:309514‑M1/150‑80 (MQ=255) aGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcac > 1:4379‑M1/1‑70 (MQ=255) gCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaa < 2:1527681/134‑1 (MQ=255) gAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagc > 1:745708‑M1/1‑64 (MQ=255) atctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc > 2:503360‑M1/62‑64 (MQ=255) atctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc < 1:503360‑M1/3‑1 (MQ=255) tgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc > 2:1679416‑M1/59‑61 (MQ=255) tgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc < 1:1679416‑M1/3‑1 (MQ=255) gacgtcatgcgcatcctgtttgctgtgcgacagagcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGt < 2:2153328‑M1/58‑1 (MQ=255) gCGGTATGGTAACCGAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgt < 2:1510258‑M1/150‑93 (MQ=255) acgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGc > 1:855291‑M1/57‑150 (MQ=255) cGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtg < 1:1448630‑M1/150‑94 (MQ=255) tcaatggTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagaaaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtgg < 2:1166264‑M1/147‑95 (MQ=255) atgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctctc < 2:1186375‑M1/5‑1 (MQ=255) tGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcac > 1:1065060‑M1/1‑52 (MQ=255) ggTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCg < 1:1617799/150‑1 (MQ=255) gcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCg > 1:585866‑M1/50‑150 (MQ=255) gTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacag > 1:2134289‑M1/1‑50 (MQ=255) gTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataa < 1:1223427‑M1/69‑20 (MQ=255) gTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataa > 2:1223427‑M1/1‑50 (MQ=255) gcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaa > 1:1923277‑M1/48‑114 (MQ=255) gcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaa < 2:1923277‑M1/67‑1 (MQ=255) gcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGgt > 1:185663‑M1/48‑150 (MQ=255) ccAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTc > 1:2157134/1‑150 (MQ=255) ccAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTc > 1:713590/1‑150 (MQ=255) gCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaa < 2:1335046‑M1/86‑46 (MQ=255) gCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaa > 1:1335046‑M1/1‑41 (MQ=255) gatcgggCCGCACAGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCgg > 2:1954394/5‑140 (MQ=255) gggCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAt > 2:2383216/1‑105 (MQ=255) gtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTgg < 2:706156‑M1/48‑1 (MQ=255) gtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTgg > 1:706156‑M1/34‑81 (MQ=255) tgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGc < 1:770574‑M1/94‑1 (MQ=255) cGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCg > 1:265074/1‑150 (MQ=255) cacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGc > 1:940155‑M1/30‑150 (MQ=255) cTGTGCGGCCCGATCGCCGACATGCAAGCTtctatcaaacaaaagataccccactgttctttctagcgaaacacacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggat < 1:1932001‑M1/150‑121 (MQ=255) gtgCGGGCCGATCGCGGGAGAGTCGGCTATGCGATAACGCCCCATCACTTACTTATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTcc < 2:265074/150‑1 (MQ=18) agcgcagcccggaagggctgggtgagCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTcc > 1:1545783‑M1/27‑150 (MQ=255) atctgCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTccc < 2:1151818/146‑1 (MQ=255) cgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATGACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCca < 2:1750858‑M1/126‑1 (MQ=255) gcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTcc < 2:757799‑M1/124‑1 (MQ=255) agcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCTCCCGCTCCCACAt < 1:1100588‑M1/129‑1 (MQ=255) cccGATCGCGGGCAAGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccg > 2:1390827‑M1/1‑22 (MQ=255) ccGATCGCGGGCAGGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccga > 1:1912812‑M1/1‑21 (MQ=255) gATCGCGGGCAAGCAAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatg > 2:1631800‑M1/1‑19 (MQ=255) cggaagggctgggtgatCTCTCATAGAACTGCGCATAACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaaga > 1:1160864‑M1/18‑86 (MQ=255) gaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGgcg > 1:968350‑M1/16‑129 (MQ=255) aaGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggtggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggc < 2:319737‑M1/150‑142 (MQ=255) aaGCCAGCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggc < 1:1390827‑M1/150‑142 (MQ=255) gCTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactct > 2:2277279‑M1/1‑3 (MQ=255) TCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCg > 2:965433‑M1/1‑100 (MQ=255) | GGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAT > NC_002947/2301348‑2301644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |