New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3837243	71 (0.800)	4 (0.050)	4/232	NT	5.2%	coding (795/2673 nt)	PP_3388	hypothetical protein
	?	NC_002947	= 3837267	80 (0.960)					coding (819/2673 nt)	PP_3388	hypothetical protein

CGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGAAAAACTCTACCCACAG  >  NC_002947/3837099‑3837390                                                                                                                                                  |                                                                                                                                                    cGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCa                                                                                                                                                <  1:1972476/150‑1 (MQ=255) cGACCTGCAGGCGCTACTGGACATGCCGCCGATCAACAACGACCAGATCGTCTCG‑GCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCa                                                                                                                                                >  2:1480899/1‑150 (MQ=255)  gACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAg                                                                                                                                               <  2:2027157/150‑1 (MQ=255)           gcgcTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCCGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAAc                                                                                                                                      >  2:2116390/1‑150 (MQ=255)                 cTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTgg                                                                                                                                >  1:866668/1‑150 (MQ=255)                       cTGCAGCCGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCaat                                                                                                                          >  2:866668‑M2/1‑147 (MQ=255)                        tGCAGCCGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCaatg                                                                                                                         >  1:2054493‑M2/1‑146 (MQ=255)                            cgatatcaacaAAAACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGTCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTgcgccaggcgttgagctcctgggtaatgccga                                                                                                                     <  2:1345363‑M1/145‑33 (MQ=255)                             ccGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGTATCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATgccgcc                                                                                                                    <  1:548980/150‑1 (MQ=255)                             ccGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTgcgccaggcgttgagctcctgggtaatgccgat                                                                                                                    <  1:2105561‑M1/150‑34 (MQ=255)                              cGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTgcgccaggcgttgagctcctgggtaatgccgatg                                                                                                                   <  1:1522873‑M1/150‑35 (MQ=255)                               gTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCACACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGt                                                                                                                  >  1:1457711/1‑150 (MQ=255)                               gTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGt                                                                                                                  >  2:1676057/1‑150 (MQ=255)                               gTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGt                                                                                                                  >  1:1063512/1‑150 (MQ=255)                                 tCAACAACGACCAGATCGTCTCGCCCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTc                                                                                                                 >  2:975175/1‑150 (MQ=255)                                   aacaacGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTgcgccaggcgttgagctcctgggtaatgccgatagatcg                                                                                                              >  1:1345363‑M1/1‑111 (MQ=255)                                   aacaacGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCaatgcc                                                                                                                       >  1:1259510‑M2/1‑135 (MQ=255)                                   aacaacGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCaatgcc                                                                                                                       <  2:1259510‑M2/141‑7 (MQ=255)                                     caacGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGCCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCgatga                                                                                                            >  1:1948091/1‑150 (MQ=255)                                      aacGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCgatgat                                                                                                           >  1:182842/1‑150 (MQ=255)                                      aacGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCgatgat                                                                                                           <  2:620845/150‑1 (MQ=255)                                       acGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGatgatg                                                                                                          <  2:1063512/150‑1 (MQ=255)                                       acGACCAGATCGTCTCG‑ACCACCGCCTCCAGCCGGGCGCTGGCGCCGCCGTGGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCACTGCCGCCGTCGatgatg                                                                                                          <  2:1231196/150‑1 (MQ=18)                                         gACCAGATCGTCTCG‑CCCCACGCCTCAAGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAAc                                                                                                                                      >  2:1900308/1‑120 (MQ=255)                                         gACCAGATCGTCTCG‑CCCCACGCCTCAAGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAAc                                                                                                                                      <  1:1900308/120‑1 (MQ=255)                                             aGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCGCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGaaaa                                                                                                    <  1:2116390/150‑1 (MQ=255)                                              gATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAAc                                                                                                   <  2:541333/150‑1 (MQ=255)                                              gATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAAc                                                                                                   >  1:2083172/1‑150 (MQ=255)                                                   tctcG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAAAGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAAt                                                                                              >  2:611392/1‑150 (MQ=255)                                                    ctcG‑CCCCCCGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCCGCAATTACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATg                                                                                             <  1:1353517/150‑1 (MQ=21)                                                     tcG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTAATCGAAGAAGACCTGAAAAACACCGAGGAGCGCAAAGGGGCGCCCAATGCCGCCGTCGATTGTGGGAAAACGCAATgg                                                                                            >  2:1834305/1‑150 (MQ=16)                                                     tcG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGAAACTGTGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATgg                                                                                            <  1:1834305/150‑1 (MQ=25)                                                       g‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCt                                                                                          >  2:845689/1‑150 (MQ=255)                                                          cccACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCaat                                                                                                                          <  1:946144‑M2/116‑4 (MQ=255)                                                          cccACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCaat                                                                                                                          >  2:946144‑M2/1‑113 (MQ=255)                                                             acgcctcacgcctGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAAc                                                                                     >  1:344520/1‑150 (MQ=255)                                                                  tcacgcctGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGTCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCAcc                                                                                >  1:543688/1‑150 (MQ=255)                                                                    acgcctGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGt                                                                              <  2:904859/150‑1 (MQ=255)                                                                      gcctGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTg                                                                            >  1:1069764/1‑150 (MQ=255)                                                                        ctggccctggcGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGaa                                                                          <  1:743253/150‑1 (MQ=255)                                                                             cctggcGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGCTGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCgg                                                                     >  2:2143823/1‑150 (MQ=255)                                                                                    ccgccgGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGACAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGAc                                                              <  1:1067098/150‑1 (MQ=255)                                                                                      gccgGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGt                                                                                                                  >  1:1754985/1‑96 (MQ=255)                                                                                      gccgGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGt                                                                                                                  <  2:1754985/96‑1 (MQ=255)                                                                                      gccgGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACaa                                                            >  1:1917143/1‑150 (MQ=255)                                                                                       ccgGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCATGGCGCAATGCCGCCGTTGACGGTATGGGAACGGTATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAAc                                                           <  1:658986/150‑1 (MQ=25)                                                                                             aaCCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAgcgc                                                     >  2:1708290/1‑150 (MQ=255)                                                                                               ccAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCaa                                                   <  2:1948091/150‑1 (MQ=255)                                                                                                 aGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAAGGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGc                                                 <  1:975175/150‑1 (MQ=255)                                                                                                  gACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGgc                                                                                                                               >  2:560732/1‑71 (MQ=255)                                                                                                  gACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGgc                                                                                                                               <  1:560732/71‑1 (MQ=255)                                                                                                  gACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTg                                                                 <  2:2377621/133‑1 (MQ=255)                                                                                                  gACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTg                                                                 >  1:2377621/1‑133 (MQ=255)                                                                                                   aCCAAACCCCGTGGCGCCGCCATTGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCtt                                               >  2:2092812/1‑150 (MQ=255)                                                                                                   aCCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCtt                                               <  2:344520/150‑1 (MQ=255)                                                                                                     cAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCgatgat                                                                                                           <  2:2235097/88‑1 (MQ=255)                                                                                                     cAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCgatgat                                                                                                           >  1:2235097/1‑88 (MQ=255)                                                                                                     cAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGt                                                                  >  1:1197266/1‑129 (MQ=255)                                                                                                     cAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGt                                                                  <  2:1197266/129‑1 (MQ=255)                                                                                                     cAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCt                                             >  1:1178162/1‑150 (MQ=255)                                                                                                     cAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCt                                             >  2:244275/1‑150 (MQ=255)                                                                                                     cAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCt                                             <  2:1457711/150‑1 (MQ=255)                                                                                                     cAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCCTGAACCCCCATTTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACACCGAGCGCAAGCTTCt                                             >  1:1353743/1‑150 (MQ=25)                                                                                                      aaaCCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTg                                            <  2:2083172/150‑1 (MQ=255)                                                                                                          cccGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTcg                                        >  1:2272731/1‑150 (MQ=255)                                                                                                                 cgccgcCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTc                                 <  1:1480899/150‑1 (MQ=255)                                                                                                                       cATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCt                           >  1:805933/1‑150 (MQ=255)                                                                                                                            tCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGaaa                      <  1:1708290/150‑1 (MQ=255)                                                                                                                               tCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCg                   >  2:164116/1‑150 (MQ=255)                                                                                                                                cGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCAACAGCCGCGGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGa                  >  2:592986/1‑150 (MQ=25)                                                                                                                                    gATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGaaaaa              >  1:1957216/1‑150 (MQ=255)                                                                                                                                    cgatctatcggcaTTACCCAGGAGCTCAACGCCTGGCGCaatgccgatggcatcttcgatgacgatggcggcgccacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgtt              >  1:1345363‑M2/7‑39 (MQ=255)                                                                                                                                     aTGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGAAAAAc             <  2:1178162/150‑1 (MQ=255)                                                                                                                                      tGCCATGGGCATTACCCGGGAGCTCAACGCCTGGCGCAATGTCGCCGTCGATGATGTGAAATCGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTTGTCGCGCAGTCGTTCCTTGAAATCGAAAATct            <  2:182842/150‑1 (MQ=25)                                                                                                                                         cATCGGCATTACCCAGGAGCTCAACGCCTGGCGCaatgccgatggcatcttcgatgacgatggcggcgccacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacg         <  1:1522873‑M2/150‑117 (MQ=255)                                                                                                                                         cATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGAAAAACTCTa         >  2:858219/1‑150 (MQ=255)                                                                                                                                          aTCGGCATTACCCAGGAGCTCAACGCCTGGCGCaatgccgatggcatcttcgatgacgatggcggcgccacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacgg        <  1:2105561‑M2/150‑118 (MQ=255)                                                                                                                                          aTCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCt                                                                                          <  1:205596/68‑1 (MQ=255)                                                                                                                                          aTCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCt                                                                                          >  2:205596/1‑68 (MQ=255)                                                                                                                                          aTCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGAAAAACTCTAc        >  2:1210683/1‑150 (MQ=255)                                                                                                                                          aTCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGAAAAACTCTAc        >  1:226549/1‑150 (MQ=255)                                                                                                                                           tCGGCATTACCCAGGAGCTCAACGCCTGGCGCaatgccgatggcatcttcgatgacgatggcggcgccacggggtttggtctggttcaccggcggcgccaggaccaggcgtgaggcgtggggcgagacgatctggtttttgttgatatcg       <  2:1345363‑M2/150‑119 (MQ=255)                                                                                                                                           tCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAAt                     <  2:2222030/136‑1 (MQ=255)                                                                                                                                           tCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGAAAAACTCTAcc       <  1:454864/150‑1 (MQ=255)                                                                                                                                           tCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGAAAAACTCTAcc       >  2:1911083/1‑150 (MQ=255)                                                                                                                                           tCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTAAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAAt                     >  1:2222030/1‑136 (MQ=255)                                                                                                                                             ggCATTgcgccaggcgttgagctcctgggtaatgccgatggcatcttcgatgacgatggcggcgccacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgtt              >  1:1259510‑M1/1‑6 (MQ=255)                                                                                                                                             ggCATTgcgccaggcgttgagctcctgggtaatgccgatggcatcttcgatgacgatggcggcgccacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgtt              <  2:1259510‑M1/141‑136 (MQ=255)                                                                                                                                             ggCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGAAAAACTCTACCca     >  2:2179910/1‑150 (MQ=255)                                                                                                                                               cATTgcgccaggcgttgagctcctgggtaatgccgatggcatcttcgatgacgatggcggcgccacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacggctgca   >  1:2054493‑M1/1‑4 (MQ=255)                                                                                                                                               cATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCt                                                                                          >  2:825683/1‑63 (MQ=255)                                                                                                                                               cATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCt                                                                                          <  1:825683/63‑1 (MQ=255)                                                                                                                                                aTTgcgccaggcgttgagctcctgggtaatgccgatggcatcttcgatgacgatggcggcgccacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggggcgagacgatctggtcgttgttgaacggctgcag  >  2:866668‑M1/1‑3 (MQ=255)                                                                                                                                                aTTgcgccaggcgttgagctcctgggtaatgccgatggcatcttcgatgacgatggcggcgccacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggg                                    <  1:946144‑M1/116‑114 (MQ=255)                                                                                                                                                aTTgcgccaggcgttgagctcctgggtaatgccgatggcatcttcgatgacgatggcggcgccacggggtttggtctggttcaccggcggcgccagggccaggcgtgaggcgtggg                                    >  2:946144‑M1/1‑3 (MQ=255)                                                                                                                                                aTTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGAAAAACTCTACCCACAg  >  2:2030462/1‑150 (MQ=255)                                                                                                                                                aTTACCCAGGAGCTCAACGCCTGGCGCAATGCCGACGTCTAGGATATGGAAACGAAATGGCTGGAAAGCTCGTTTGAACCCGGCGTTGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGCACTCGAAACAAGCGACCCACAg  >  1:1375977/1‑150 (MQ=18)                                                                                                                                                  |                                                                                                                                                    CGACCTGCAGGCGCTACTGGACCTGCAGCCGTTCAACAACGACCAGATCGTCTCG‑CCCCACGCCTCACGCCTGGCCCTGGCGCCGCCGGTGAACCAGACCAAACCCCGTGGCGCCGCCATCGTCATCGAAGATGCCATCGGCATTACCCAGGAGCTCAACGCCTGGCGCAATGCCGCCGTCGATGATGTGAAAACGAAATGGCTGGAACGCACCGTTGAACCCGGCGTGGACAACGAGCGCAAGCTTCTGGTCGCGCAGTCGTTCCTGGAAATCGAAAAACTCTACCCACAG  >  NC_002947/3837099‑3837390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.