BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4043407	87 (0.980)	5 (0.060)	4/236	NT	5.4%	coding (381/978 nt)	PP_3564	AraC family transcriptional regulator
*	?	NC_002947	= 4043426	91 (1.070)	5 (0.060)	4/236	NT	5.4%	coding (362/978 nt)	PP_3564	AraC family transcriptional regulator

Only 100 of 114 total aligned reads displayed.

GGCCAGATCTATGGCGGCGGTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAACACCACCAGGTA  >  NC_002947/4043260‑4043556

ggCCAGATCTATGGCGGCGGTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTgcag                                                                                                                                                     <  2:956161/150‑1 (MQ=255)

ggCCAGATCTATGGCGGCGGTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTgcag                                                                                                                                                     >  1:365494/1‑150 (MQ=255)

 gCCAGATCTATGGCGGCGGTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTgcagc                                                                                                                                                    >  2:1295126/1‑150 (MQ=255)

  ccAGATCTATGGCGGCGGTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTgcagca                                                                                                                                                   <  2:659484/150‑1 (MQ=255)

  ccAGATCTATGGCGGCGGTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTgcagca                                                                                                                                                   >  1:344986/1‑150 (MQ=255)

      aTCTATGGCGGCGGTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGcc                                                                                                                                               <  1:460988/150‑1 (MQ=255)

          aTGGCGTCGGTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCgcag                                                                                                                                           >  2:1901268/1‑150 (MQ=255)

           tGGCGGCGGTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCgcagg                                                                                                                                          >  1:1885520/1‑150 (MQ=255)

                 cggTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGcagcca                                                                                                                                    <  2:365494/150‑1 (MQ=255)

                 cggTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACGCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGTCGCAGGcagcca                                                                                                                                    <  2:118651/150‑1 (MQ=255)

                  ggTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAg                                                                                                                                   >  1:1511248‑M2/1‑149 (MQ=255)

                     gCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCtggctgcctgcggcctgctgcag                                                                                                                                <  1:1323236‑M1/150‑24 (MQ=255)

                            gcgcACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGgcg                                                                                                                         >  2:1755832/1‑150 (MQ=255)

                                          gTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGAcccc                                                                                                           >  1:1766946/1‑150 (MQ=255)

                                             gCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCccac                                                                                                        <  1:453975/150‑1 (MQ=255)

                                             gCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCccac                                                                                                        >  2:547625/1‑150 (MQ=255)

                                               cATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGAAGCCTTGGCGCATCAAACTCGGCTTCGTGACGACAATGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCccacca                                                                                                      <  1:1142713/150‑1 (MQ=255)

                                                aTCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACTCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAg                                                                                                     >  2:1892609/1‑150 (MQ=255)

                                                aTCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGgc                                                                                                                          <  1:721804/129‑1 (MQ=255)

                                                aTCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGgc                                                                                                                          >  2:721804/1‑129 (MQ=255)

                                                aTCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAg                                                                                                     >  1:1407296/1‑150 (MQ=255)

                                                 tCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGc                                                                                                    <  2:112418/150‑1 (MQ=255)

                                                 tCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGc                                                                                                    <  2:1928617/150‑1 (MQ=255)

                                                   gATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCtt                                                                                                  >  1:2161336/1‑150 (MQ=255)

                                                   gATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCtt                                                                                                  <  1:2174383/150‑1 (MQ=255)

                                                   gATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCACAGGCAGCCAGCAGGAAGGCGCCATTGTCGAcccc                                                                                                           >  1:807859/1‑141 (MQ=255)

                                                   gATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCACAGGCAGCCAGCAGGAAGGCGCCATTGTCGAcccc                                                                                                           <  2:807859/141‑1 (MQ=255)

                                                    aTGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGAcccc                                                                                                           >  2:536525/1‑140 (MQ=255)

                                                    aTGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGAcccc                                                                                                           <  1:536525/140‑1 (MQ=255)

                                                        aGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGacac                                                                                             >  2:1732544/1‑150 (MQ=255)

                                                              aCTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCt                                                                                       <  1:1857543/150‑1 (MQ=255)

                                                                 gCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTggg                                                                                    <  1:1901268/150‑1 (MQ=255)

                                                                 gCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTgg                                                                                    <  2:422020/150‑1 (MQ=255)

                                                                     gcgcAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCtggctgcctgcggcctgctgcaggg                                                                                                                              <  2:1929379‑M1/104‑26 (MQ=255)

                                                                     gcgcAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTggcggc                                                                                <  2:1407296/150‑1 (MQ=255)

                                                                       gcAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGgcct                                                                              >  2:2002709/1‑150 (MQ=255)

                                                                       gcAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGgcct                                                                              >  1:16543/1‑150 (MQ=255)

                                                                         aaCAGCTGTAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCAACACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGgcctgc                                                                            <  2:2260720/150‑1 (MQ=255)

                                                                         aaCAGCTGCAACTGCGGAAACGCAGCACGAAACTCGTCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCATCTTGACACCCGCCTTGGCGgcctgc                                                                            <  2:496872/150‑1 (MQ=255)

                                                                          aCAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGgcctgcc                                                                           >  2:291397/1‑150 (MQ=255)

                                                                             gCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCgcag                                                                                                                                           <  1:98725/83‑1 (MQ=255)

                                                                               tGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGc                                                                      >  2:1743847/1‑150 (MQ=255)

                                                                               tGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGc                                                                      <  1:1121175/150‑1 (MQ=255)

                                                                                gCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTggcggc                                                                                >  1:2279961/1‑139 (MQ=255)

                                                                                gCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTggcggc                                                                                <  2:2279961/139‑1 (MQ=255)

                                                                                    cTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCtt                                                                                                  >  2:664706/1‑117 (MQ=255)

                                                                                    cTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCtt                                                                                                  <  1:664706/117‑1 (MQ=255)

                                                                                     tgtggAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGcc                                                                >  2:2101397/4‑150 (MQ=255)

                                                                                          aaaCGCCGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTa                                                           >  1:824218/1‑150 (MQ=255)

                                                                                          aaaCGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTa                                                           >  1:402899/1‑150 (MQ=255)

                                                                                          aaaCGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTa                                                           >  1:383019/1‑150 (MQ=255)

                                                                                           aaCGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTaa                                                          >  2:1259051/1‑150 (MQ=255)

                                                                                              gcagcaCGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGt                                                       >  1:1639873/1‑150 (MQ=255)

                                                                                               cagcaCGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTg                                                      <  2:1402668/150‑1 (MQ=255)

                                                                                               cagcaCGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTg                                                      <  2:202344/150‑1 (MQ=255)

                                                                                               cagcaCGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTg                                                      <  1:1259051/150‑1 (MQ=255)

                                                                                                agcaCGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTgg                                                     <  2:383019/150‑1 (MQ=255)

                                                                                                 gcaCGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGgc                                                    <  2:1639873/150‑1 (MQ=255)

                                                                                                     gAAACTCGGCTTCGTGACGCCAGTGTACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCa                                                >  2:1979681/1‑150 (MQ=255)

                                                                                                          tCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGcgcc                                           >  2:1312078/1‑150 (MQ=255)

                                                                                                               ttCTTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGa                                                                                                               <  2:1477338/77‑1 (MQ=255)

                                                                                                               ttCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGa                                                                                                               >  1:1477338/1‑77 (MQ=255)

                                                                                                                tCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTCTCAGCCCTCGTAAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTg                                     <  1:2224098/150‑1 (MQ=255)

                                                                                                                  gTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTg                                                              <  2:1897415/123‑1 (MQ=255)

                                                                                                                  gTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTg                                                              >  1:1897415/1‑123 (MQ=255)

                                                                                                                     aCGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCAt                                <  1:1892609/150‑1 (MQ=255)

                                                                                                                       gCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGgcctgcc                                                                           <  1:779437/105‑1 (MQ=255)

                                                                                                                       gCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGgcctgcc                                                                           >  2:779437/1‑105 (MQ=255)

                                                                                                                       gCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATgg                              <  1:1559588/150‑1 (MQ=255)

                                                                                                                       gCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATgg                              >  2:816366/1‑150 (MQ=255)

                                                                                                                       gCCAGTGCACCACCACTTTGTGCCCATGCtggctgcctgcggcctgctgcag                                                                                                                                <  2:760004‑M1/52‑24 (MQ=255)

                                                                                                                            tGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCAt                                >  2:2063914/1‑143 (MQ=255)

                                                                                                                            tGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCAt                                <  1:2063914/143‑1 (MQ=255)

                                                                                                                            tGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTg                         >  2:1994158/1‑150 (MQ=255)

                                                                                                                             tcaccacgccTTTGTGCTGTAGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGAGCCCCGCCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGGCAGCGCCGCGGTGGCCATGGCACTGc                        <  2:182134/149‑1 (MQ=255)

                                                                                                                               accaccacTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGa                      >  1:182134/1‑150 (MQ=255)

                                                                                                                                 caccacTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCccacca                                                                                                      >  2:7197/1‑68 (MQ=255)

                                                                                                                                 caccacTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCccacca                                                                                                      <  1:7197/68‑1 (MQ=255)

                                                                                                                                 caccacTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCccacc                                                                                                       >  2:1047575/1‑67 (MQ=255)

                                                                                                                                 caccacTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCccacc                                                                                                       <  1:1047575/67‑1 (MQ=255)

                                                                                                                                   ccacTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGAccgc                  >  2:1836900/1‑150 (MQ=255)

                                                                                                                                    cacTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAAc                                                                   <  1:1275782/100‑1 (MQ=255)

                                                                                                                                    cacTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAAc                                                                   >  2:1275782/1‑100 (MQ=255)

                                                                                                                                     acTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGAccgccg                >  2:415135/1‑150 (MQ=255)

                                                                                                                                       tttGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGgc                                                    >  1:73954/1‑112 (MQ=255)

                                                                                                                                             ccccTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAAcaccac        <  2:1408426/150‑1 (MQ=255)

                                                                                                                                              cccTGCAGCAGGCCGCAGGCAGCCAgcaggggcacaaagtggtggtgcactggcgtcacgaagccgagtttcgtgctgcgtttccgcagttgcagctgttgcgc                                                     <  2:1929379‑M2/104‑80 (MQ=255)

                                                                                                                                              cccTGCAGCAGGCCGCAGGCAGCCAgcaggggcacaaagtggtggtgcactggcgtcacgaagccgagtttcgtgctgcgtttccgcagttgcagctgttgcgc                                                     >  1:1929379‑M2/1‑25 (MQ=255)

                                                                                                                                               ccTGCAGCAGGCCGCAGGTAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAACAccacca      <  1:1295126/150‑1 (MQ=255)

                                                                                                                                                cTGCAGCAGGCCGCAGGCAGCCAgcatgggcacaaagtggtggtgcactggc                                                                                                       >  1:760004‑M2/1‑23 (MQ=255)

                                                                                                                                                cTGCAGCAGGCCGCAGGCAGCCAgcatgggcacaaagtggtggtgcactggc                                                                                                       <  2:760004‑M2/52‑30 (MQ=255)

                                                                                                                                                cTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAac             >  1:2183486/1‑142 (MQ=255)

                                                                                                                                                cTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAac             <  2:2183486/142‑1 (MQ=255)

                                                                                                                                                cTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAACACCACCAg     <  2:1885520/150‑1 (MQ=255)

                                                                                                                                                cTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAACACCACCAg     >  1:1285698/1‑150 (MQ=255)

                                                                                                                                                cTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAACACCACCAg     >  1:692905/1‑150 (MQ=255)

                                                                                                                                                 tGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAACACCACCAgg    <  1:415135/150‑1 (MQ=255)

                                                                                                                                                 tGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAACACCACCAgg    <  2:824218/150‑1 (MQ=255)

                                                                                                                                                   ctggctgcctgcggcctgctgcaggggcacaaagtggtggtgcactggcgtcacgaagccgagtttcgtgctgcgtttccgcagttgcagctgttgcgcgagcagttgtactgcatcgatggcaaccgcatcacgtgcgccggtggcacc  >  1:1511248‑M1/1‑1 (MQ=255)

                                                                                                                                                   cagcagGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAACACCACCAGGTa  <  1:547625/150‑1 (MQ=255)

GGCCAGATCTATGGCGGCGGTGCCACCGGCGCACGTGATGCGGTTGCCATCGATGCAGTACAACTGCTCGCGCAACAGCTGCAACTGCGGAAACGCAGCACGAAACTCGGCTTCGTGACGCCAGTGCACCACCACTTTGTGCCCCTGCAGCAGGCCGCAGGCAGCCAGCAGGAAGGCGCCATTGTCGACCCCCACCAGCTTGACACCCGCCTTGGCGGCCTGCCTGAGCAACGCCTGGTAACGTGGCGCCAGCGCCGCGGTGGCCATGGCACTGCGACCGCCGAACACCACCAGGTA  >  NC_002947/4043260‑4043556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.