New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4246065 =100 (1.130)12 (0.150) 12/230 NT 12.1% coding (254/1230 nt) alr alanine racemase
?NC_002947 4246096 = 81 (0.980)coding (223/1230 nt) alr alanine racemase

Only 100 of 132 total aligned reads displayed.

CTGCAAGCCATCTTCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGTTTTGCACGGTCAGGGT  >  NC_002947/4245917‑4246213
                                                                                                                                                    |                                                                                                                                                     
cTGCAAGCCATCTTCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAg                                                                                                                                                      <  2:1324194/150‑1 (MQ=255)
 tGCAAGCCATCTTCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAgg                                                                                                                                                     <  2:788792/150‑1 (MQ=255)
 tGCAAGCCATCTTCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAgg                                                                                                                                                     >  2:240193/1‑150 (MQ=255)
 tGCAAGCCATCTTCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAgg                                                                                                                                                     <  1:2280583/150‑1 (MQ=255)
   ccgttgtccatcgacaacggcaccaacaccctgaccgtgcaaaacagcaatgcctgggtcgaagtcagcgccagcgccctgcagcacaacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGcc                                                                                                                                                   <  1:1781841‑M1/5‑1 (MQ=255)
    cgttgtccatcgacaacggcaccaacaccctgaccgtgcaaaacagcaatgcctgggtcgaagtcagcgccagcgccctgcagcacaacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCg                                                                                                                                                  <  2:1241269‑M1/6‑1 (MQ=255)
      ttgtcgatggacaacggcaccaacaccctgaccgtgcaaaacagcaatgcctgggtcgaagtcagcgccagcgccctgcagcacaacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCGAt                                                                                                                                                >  1:865492‑M1/143‑150 (MQ=255)
       ccATCTTCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATa                                                                                                                                               <  1:2184653/150‑1 (MQ=255)
        cATCTTCCAGCTCGCTGAGGCTGGCCAGGCGTACGGGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATAc                                                                                                                                              >  1:1999477/1‑150 (MQ=255)
        cATCTTCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATAc                                                                                                                                              >  2:786288/1‑150 (MQ=255)
            ttCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGAtgcctat                                                                                                                                          >  2:696898/1‑144 (MQ=255)
            ttCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑Tg                                                                                                                                         <  2:962248/150‑1 (MQ=255)
            ttCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑Tg                                                                                                                                         >  1:2077309/1‑150 (MQ=255)
            ttCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGAACACCCGCCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑Tg                                                                                                                                         <  1:737352/150‑1 (MQ=255)
              ccAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGc                                                                                                                                       <  1:786288/150‑1 (MQ=255)
              ccAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGc                                                                                                                                       <  1:1030405/150‑1 (MQ=255)
                  cTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATa                                                                                                                                   >  1:1685982/1‑150 (MQ=255)
                   tCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAg                                                                                                                                  <  1:240193/150‑1 (MQ=255)
                   tCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAg                                                                                                                                  >  2:2403573/1‑150 (MQ=255)
                   tCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCACAg                                                                                                                                  <  1:2403573/150‑1 (MQ=255)
                          caacaccctgaccgtgcaaaacagcaatgcctgggtcgaagtcagcgccagcgccctgcagcacaacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCGATACCG‑TGGCCATa                                                                                                                                   <  1:816618‑M1/20‑1 (MQ=255)
                          caacaccctgaccgtgcaaaacagcaatgcctgggtcgaagtcagcgccagcgccctgcagcacaacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCGATACCG‑TGGCCATa                                                                                                                                   >  2:816618‑M1/123‑142 (MQ=255)
                           gCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGc                                                                                                                          >  1:1064374/1‑150 (MQ=255)
                               gCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTg                                                                                                                      >  1:1177636/1‑150 (MQ=255)
                                ccAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGa                                                                                                                     >  1:2334634/1‑150 (MQ=255)
                                ccAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGa                                                                                                                     <  1:2258282/150‑1 (MQ=255)
                                 cAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACACGGGCCTCCTCATTGCTGGCCACCGTCCCGCAGGGCCCGCCTCGTGCGATGATCGATGGCAATACCAGCCCGCTCCCG‑TGGCCATATCCACCGCCCTTGAg                                                                                                                    >  2:1021920/1‑150 (MQ=255)
                                    gggTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCAc                                                                                                                 >  1:1617262/3‑150 (MQ=255)
                                          ccGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑Tg                                                                                                                                         <  2:1908823/120‑1 (MQ=255)
                                          ccGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑Tg                                                                                                                                         >  1:1908823/1‑120 (MQ=255)
                                          ccGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGca                                                                                                           >  2:1781841/1‑150 (MQ=255)
                                           cGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAg                                                                                                                                                      >  2:931771/1‑107 (MQ=255)
                                           cGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAg                                                                                                                                                      <  1:931771/107‑1 (MQ=255)
                                            gCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGcaca                                                                                                         >  2:184627/1‑150 (MQ=255)
                                              aCCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACGATGCCGATACCG‑TGGCCATAGGCATCGGCCTTAAGCACGGCGCACAGc                                                                                                       >  2:1042104/1‑150 (MQ=255)
                                                 aGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTg                                                                                                    <  2:1617262/150‑1 (MQ=255)
                                                 aGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTg                                                                                                    <  2:420025/150‑1 (MQ=255)
                                                 aGTTGCCCGGTGAAGCCACTGGCGCGAACCACGCAGACTTAACCGTCGGAACATACGACTACGCAGGGCACGCATTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTg                                                                                                    <  1:2342432/150‑1 (MQ=255)
                                                   ttGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGa                                                                                                  <  2:1852640/150‑1 (MQ=255)
                                                      cccGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGAGCACAGCTTGGACtt                                                                                               >  2:1677804/1‑150 (MQ=255)
                                                       ccGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTg                                                                                              >  1:1447421/1‑150 (MQ=255)
                                                            gAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGc                                                                                         <  1:2328072/150‑1 (MQ=255)
                                                               gCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGa                                                                                                                     >  2:1980793/1‑119 (MQ=255)
                                                               gCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGa                                                                                                                     <  1:1980793/119‑1 (MQ=255)
                                                                ccACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGc                                                                                     >  2:2102651/1‑150 (MQ=255)
                                                                  aCTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCtt                                                                                                                       <  2:1286749/114‑1 (MQ=255)
                                                                  aCTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCtt                                                                                                                       >  1:1286749/1‑114 (MQ=255)
                                                                   tcagcgccagcgccctgcagcacaacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCGATACCG‑TGGCCATAGGCATCGGc                                                                                                                          >  2:1652137‑M1/82‑110 (MQ=255)
                                                                   tcagcgccagcgccctgcagcacaacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCGATACCG‑TGGCCATAGGCATCGGc                                                                                                                          <  1:1652137‑M1/29‑1 (MQ=255)
                                                                      gcgccagcgccctgcagcacaacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCGATACCG‑TGGCCATAg                                                                                                                                  >  1:2041532‑M1/79‑99 (MQ=255)
                                                                            aCCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGTAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGTCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGc                                                                         <  1:1967038/150‑1 (MQ=255)
                                                                            aCCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCATGCAGc                                                                         >  1:962442/1‑150 (MQ=255)
                                                                              cACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCAAAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGt                                                                       >  1:2057703/1‑150 (MQ=255)
                                                                                    ggCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGAt                                                                 <  2:922826/150‑1 (MQ=255)
                                                                                    ggCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGAt                                                                 <  2:2077309/150‑1 (MQ=255)
                                                                                       ctcctcGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGAtgtt                                                              >  1:1031405/1‑150 (MQ=255)
                                                                                       ctcctcGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGAtgtt                                                              >  1:1241269/1‑150 (MQ=255)
                                                                                       ctcctcGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGAtgtt                                                              >  1:1400505/1‑150 (MQ=255)
                                                                                        tcctcGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGAtgttg                                                             >  1:163993/1‑150 (MQ=255)
                                                                                        acaacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCGATACCG‑TGGCCATAGGCATCGGCCt                                                                                                                        <  2:1517008‑M1/31‑1 (MQ=255)
                                                                                        acaacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCGATACCG‑TGGCCATAGGCATCGGCCt                                                                                                                        >  1:1517008‑M1/61‑91 (MQ=255)
                                                                                          aacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCGATACCG‑TGGCCATAGGCATCGGCCtt                                                                                                                       >  2:567806‑M1/59‑90 (MQ=255)
                                                                                          aacatccgcacgctgcaggccgagctggccggcaagtccaagctgtgcgccgtgctcaAGGCCGATACCG‑TGGCCATAGGCATCGGCCtt                                                                                                                       <  1:567806‑M1/32‑1 (MQ=255)
                                                                                           tcGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGAt                                                                 >  1:708261/1‑143 (MQ=255)
                                                                                                 cTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAgg                                                    <  1:184627/150‑1 (MQ=255)
                                                                                                 cTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAgg                                                    <  2:2334634/150‑1 (MQ=255)
                                                                                                  tGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAggg                                                   >  2:294749/1‑150 (MQ=255)
                                                                                                     ccACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGggcgc                                                <  2:437724/150‑1 (MQ=255)
                                                                                                     ccACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGggcgc                                                <  1:912675/150‑1 (MQ=255)
                                                                                                      cACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGc                                                                         <  1:1254017/124‑1 (MQ=255)
                                                                                                      cACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCAAAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGggcgct                                               <  2:2057703/150‑1 (MQ=255)
                                                                                                       aCCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGggcgctg                                              <  2:1031405/150‑1 (MQ=255)
                                                                                                       aCCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGAACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGggcgctg                                              >  2:1281368/1‑150 (MQ=255)
                                                                                                          gCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGGTGTTGTGCTGCAGggcgctggcg                                           >  2:2409555/1‑150 (MQ=255)
                                                                                                          gCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGggcgctggcg                                           >  1:2133095/1‑150 (MQ=255)
                                                                                                             aCGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGgcgctggcgctg                                        >  1:1087206/1‑150 (MQ=255)
                                                                                                              cGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGc                                                                                                                          <  2:205253/67‑1 (MQ=255)
                                                                                                              cGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGa                                       <  1:2102651/150‑1 (MQ=255)
                                                                                                                    gCACGTCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGTCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAACTCGGCTTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGa                                 <  1:1042104/150‑1 (MQ=255)
                                                                                                                        gCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCa                             >  2:2270476/1‑150 (MQ=255)
                                                                                                                             gggCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCa                                                      <  1:1055191/120‑1 (MQ=255)
                                                                                                                              ggCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCAtt                       <  2:1064374/150‑1 (MQ=255)
                                                                                                                                 gatgatCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGcc                                                                               >  1:1560554/1‑91 (MQ=255)
                                                                                                                                 gatgatCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCGCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCt                    <  2:1085643/150‑1 (MQ=255)
                                                                                                                                    gatCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCTTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGtt                 <  2:2133095/150‑1 (MQ=255)
                                                                                                                                    gatCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAg                                                     <  1:429603/114‑1 (MQ=255)
                                                                                                                                      tCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGtttt               >  1:1296050/1‑150 (MQ=255)
                                                                                                                                      tCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGtttt               <  2:450080/150‑1 (MQ=255)
                                                                                                                                      tCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCCGACATCTCGGCCTGCAGCGTTCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGtttt               <  1:294749/150‑1 (MQ=255)
                                                                                                                                          gccgtgctcaAGGCCGATGCCTATGGCCAC‑GGTATCGGCCTGGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGTTTTGCAc           <  1:1020217‑M1/140‑1 (MQ=255)
                                                                                                                                            gCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGTTTTGCACgg         >  2:1923463/1‑150 (MQ=255)
                                                                                                                                              aTTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACt                                     <  1:1901766/120‑1 (MQ=255)
                                                                                                                                              aTTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGTTTTGCACGGTc       >  2:304739/1‑150 (MQ=255)
                                                                                                                                              aTTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGAACGGCCTGCAGCGTGGTGATGTTGTGCTGCAGGTCGCTGGCGCTAACTTCGACCCAGGCATTGCTGTTTTGCACgggc       >  2:44696/1‑148 (MQ=255)
                                                                                                                                                 aCCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGTTTTGCACGGTCAgg    <  1:701990/150‑1 (MQ=255)
                                                                                                                                                 aCCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGTTTTGCACGGTCAgg    >  2:1505721/1‑150 (MQ=255)
                                                                                                                                                 aCCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGTTTTGCACGGTCAgg    <  2:1447421/150‑1 (MQ=255)
                                                                                                                                                 aCCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGTTTTGCACGGTCAgg    >  1:1761884/1‑150 (MQ=255)
                                                                                                                                                   cAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGtgctgc                                                       >  2:673258/1‑97 (MQ=255)
                                                                                                                                                   cAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGtgctgc                                                       <  1:673258/97‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CTGCAAGCCATCTTCCAGCTCGCTGAGGCTGGCCAGGCGTACCCGCACCAGTTGCCCGGTGAAGCCACTGGCGCGGACCACGCGGGCCTCCTCGTTGCTGGCCACCGCCACGCAGGGCACGCCTTGGGCGATGATCGATGGCATTACCAGGCCGATACCG‑TGGCCATAGGCATCGGCCTTGAGCACGGCGCACAGCTTGGACTTGCCGGCCAGCTCGGCCTGCAGCGTGCGGATGTTGTGCTGCAGGGCGCTGGCGCTGACTTCGACCCAGGCATTGCTGTTTTGCACGGTCAGGGT  >  NC_002947/4245917‑4246213

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.