New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 581689885 (0.960)18 (0.210) 8/236 NT 19.7% intergenic (+28/+101) PP_5092/pilT NLP/P60 protein/twitching motility protein
?NC_002947 = 5816983 65 (0.770)intergenic (+113/+16) PP_5092/pilT NLP/P60 protein/twitching motility protein

Only 100 of 113 total aligned reads displayed.

CTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCC  >  NC_002947/5816749‑5817047
                                                                                                                                                     |                                                                                                                                                     
cTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCC                                                                                                                                                       >  2:1026243‑M1/1‑150 (MQ=255)
cTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTAAGTGGTGGACAAGCGGGTGCTGCCCAAACAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCC                                                                                                                                                       <  1:902040‑M1/150‑1 (MQ=255)
 tccacgcCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGcccc                                                                                                                                                      >  2:1937812/1‑150 (MQ=255)
   cacgcCGGGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCGTACTGGCAGAAGCACTACGTGGTCGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAACGTTCAGCTGCTCGGCGCTATCCGATACCGGCCCCtt                                                                                                                                                    >  2:839227/1‑150 (MQ=255)
    acgcCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTc                                                                                                                                                   >  2:1695307/1‑150 (MQ=255)
    acgcCGTGGCAAGAGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTc                                                                                                                                                   >  2:1727317/1‑150 (MQ=255)
       gcGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTcgcg                                                                                                                                                <  1:256067/149‑1 (MQ=255)
       ccGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTcgcg                                                                                                                                                <  1:1937812/150‑1 (MQ=255)
       ccGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTcgcg                                                                                                                                                >  2:2158934/1‑150 (MQ=255)
              aaGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCCGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGc                                                                                                                                         >  1:413456/1‑150 (MQ=255)
                gCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGccc                                                                                                                                       >  2:1614699/1‑150 (MQ=255)
                      gAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCcttcgcgggcgtgcccgcgaag                                                                                                                                 <  2:104183‑M1/150‑23 (MQ=255)
                      gAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTccc                                                                                                                                 >  1:729758/1‑150 (MQ=255)
                        gTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCcac                                                                                                                               >  1:1556203/1‑150 (MQ=255)
                             gACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGTGTTCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTa                                                                                                                          <  2:1069334/150‑1 (MQ=255)
                             gACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTa                                                                                                                          >  2:155225/1‑150 (MQ=255)
                              acacCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTat                                                                                                                         >  1:584525/1‑149 (MQ=255)
                                acCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAgcg                                                                                                                       >  2:1605384/1‑150 (MQ=255)
                                 ccTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAgcgc                                                                                                                      <  2:58491/150‑1 (MQ=255)
                                  cTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTatgtga                                                                                                                     >  2:1710991/1‑145 (MQ=255)
                                  cTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGcgcg                                                                                                                     >  2:1735934/1‑150 (MQ=255)
                                   ttGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGt                                                                                                                    <  2:2096751/150‑1 (MQ=255)
                                   ttGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGt                                                                                                                    >  2:1623670/1‑150 (MQ=255)
                                   ttGAGAAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCtttcgcgggcgcgcccgctcccacaggtatgtgag                                                                                                                    >  2:2202649‑M1/1‑115 (MQ=255)
                                          aGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCtctc                                                                                                             <  1:529850/150‑1 (MQ=255)
                                          aGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCtctc                                                                                                             <  1:1605384/150‑1 (MQ=255)
                                                  tGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAg                                                                                                     <  1:1735934/150‑1 (MQ=255)
                                                    gCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGccc                                                                                                                                       <  1:1454136/114‑1 (MQ=255)
                                                    gCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGccc                                                                                                                                       >  2:1454136/1‑114 (MQ=255)
                                                      aGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTc                                                                                                                   >  1:261757/1‑132 (MQ=255)
                                                      aGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTc                                                                                                                   <  2:261757/132‑1 (MQ=255)
                                                      aGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCACTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTca                                                                                                 <  1:1586470/150‑1 (MQ=255)
                                                        aaGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcaca                                                                                               >  2:85333/1‑150 (MQ=255)
                                                          gCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCTAGGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATa                                                                                             <  1:2000022/150‑1 (MQ=255)
                                                           cACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCcttcgcgggcacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctac                                                                                            <  2:584525‑M1/150‑60 (MQ=255)
                                                           cACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATAc                                                                                            <  1:177520/150‑1 (MQ=255)
                                                               aCGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgt                                                                                        <  1:225942/150‑1 (MQ=255)
                                                                cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCcttcgcgggcacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtg                                                                                       <  2:1994352‑M1/150‑65 (MQ=255)
                                                                cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCcttcgcgggcacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtg                                                                                       <  1:1710991‑M1/150‑65 (MQ=255)
                                                                cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgtg                                                                                       <  1:1614699/150‑1 (MQ=255)
                                                                 gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                      <  1:2202649‑M1/150‑66 (MQ=255)
                                                                 gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCcttcgcgggcacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                      <  2:1556203‑M1/150‑66 (MQ=255)
                                                                 gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCcttcgcgggcacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                      <  1:1727317‑M1/150‑66 (MQ=255)
                                                                 gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                      <  1:2158934/150‑1 (MQ=255)
                                                                       gCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGTCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCgg                                                                                <  1:897909/150‑1 (MQ=255)
                                                                       gCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCcttcgcgggcacgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgg                                                                                <  1:1370986‑M1/150‑72 (MQ=255)
                                                                       gCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAg                                                                                                                         <  1:1282085/109‑1 (MQ=255)
                                                                        ccAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCcgg                                                                               <  1:85333/150‑1 (MQ=255)
                                                                          aaGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcg                                                                             >  2:869162‑M1/1‑76 (MQ=255)
                                                                          aaGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgcg                                                                             >  1:386318/1‑150 (MQ=255)
                                                                          aaGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGAGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgcg                                                                             >  1:151219/1‑150 (MQ=255)
                                                                            gCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtggga                                                                                    >  1:1798226‑M1/1‑74 (MQ=255)
                                                                            gCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtggga                                                                                    <  2:1798226‑M1/141‑68 (MQ=255)
                                                                                  gctgcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTca                                                                                                 >  1:1664377/1‑122 (MQ=255)
                                                                                    tgcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTCAGCTGATCGGCGCTATCCGGTACCGGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgggagcgggcgtgcccgcgaa                                                                   <  1:869162‑M1/150‑85 (MQ=255)
                                                                                     gcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGaaa                                                                  <  1:2270985/150‑1 (MQ=255)
                                                                                        gAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCcttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtggga                                                                                    <  2:1912694‑M1/129‑68 (MQ=255)
                                                                                        gAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCcttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtggga                                                                                    >  1:1912694‑M1/1‑62 (MQ=255)
                                                                                        gAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTcaca                                                                                               <  1:976094/118‑1 (MQ=255)
                                                                                             agcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCttt                                                          <  1:1026243/150‑1 (MQ=255)
                                                                                              gcagcagcTGGCTCGGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCAGCTCTCACAGGTAGCGCGTCGATCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTg                                                         <  1:1695307/150‑1 (MQ=38)
                                                                                               cagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGc                                                        <  2:151219/150‑1 (MQ=255)
                                                                                                 gcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAg                                                      <  2:729758/150‑1 (MQ=255)
                                                                                                  cagcTGAGTCTGGCCAAGCGTTCAGCTGATCGGCGCTCCCCGGTCCCGCCCCCTTCGCTGGCACGCCCGCTCCCACAGGTAGCGCTTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAgg                                                     <  2:1237400/150‑1 (MQ=38)
                                                                                                    gcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGta                                                   <  1:1891114/150‑1 (MQ=255)
                                                                                                     cTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                      <  2:2322186/114‑1 (MQ=255)
                                                                                                     cTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                      >  1:2322186/1‑114 (MQ=255)
                                                                                                              gCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCt                                         >  1:135451/1‑150 (MQ=255)
                                                                                                              gCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCt                                         <  2:1995877/150‑1 (MQ=255)
                                                                                                                cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                      >  1:2168811/1‑103 (MQ=255)
                                                                                                                cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACaa                                             <  2:2238345/144‑1 (MQ=255)
                                                                                                                cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACaa                                             >  1:2238345/1‑144 (MQ=255)
                                                                                                                cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCttt                                       >  1:2009207/1‑150 (MQ=255)
                                                                                                                 aaGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTGGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCCCTCGCGCGCAGCTCACATACTTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTg                                      >  1:2302542/1‑150 (MQ=255)
                                                                                                                  aGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGa                                     <  2:386318/150‑1 (MQ=255)
                                                                                                                    cGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgtg                                                                                       <  1:1864927/98‑1 (MQ=255)
                                                                                                                    cGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgtg                                                                                       >  2:1864927/1‑98 (MQ=255)
                                                                                                                    cGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCg                                                                                 >  2:1199774/1‑104 (MQ=255)
                                                                                                                    cGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCg                                                                                 <  1:1199774/104‑1 (MQ=255)
                                                                                                                      ttAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGaaa                                                                  >  2:2024736/1‑117 (MQ=255)
                                                                                                                         aGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTcgc                                                                                                           <  2:1357232/73‑1 (MQ=255)
                                                                                                                           cTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTccc                                                                                                                                 <  1:1052285/49‑1 (MQ=255)
                                                                                                                           cTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTccc                                                                                                                                 >  2:1052285/1‑49 (MQ=255)
                                                                                                                           cTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCACACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTc                            <  2:1864564/150‑1 (MQ=255)
                                                                                                                            tGATCGGCGCTATCCGGTACCGGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                      <  2:1010471‑M1/91‑66 (MQ=255)
                                                                                                                            tGATCGGCGCTATCCGGTACCGGCCCtttcgcgggcgcgcccgctcccacaggtatgtgagctgcgcgcgagagcgacgcgctacctgtgg                                                                                      >  1:1010471‑M1/1‑26 (MQ=255)
                                                                                                                               tCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTc                                                                                                                   >  1:285443/1‑59 (MQ=255)
                                                                                                                               tCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTc                                                                                                                   <  2:285443/59‑1 (MQ=255)
                                                                                                                                cGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTcc                       <  1:1971899/150‑1 (MQ=255)
                                                                                                                                    gcTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCa                   <  1:1688435/150‑1 (MQ=255)
                                                                                                                                        tCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCt               <  2:2375444/150‑1 (MQ=255)
                                                                                                                                          cGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTcc             >  1:1370439/1‑150 (MQ=255)
                                                                                                                                          cGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTcc             >  1:1130985/1‑150 (MQ=255)
                                                                                                                                              aCCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCaa         <  2:2186502/150‑1 (MQ=255)
                                                                                                                                                cGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCttt                                       <  1:60881/118‑1 (MQ=255)
                                                                                                                                                cGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCttt                                       >  2:60881/1‑118 (MQ=255)
                                                                                                                                                  gCCCCGTCGCGGGTACGCCCGTTGCCACTGGGACCGCGTCGCTATCGCTGTCAGCTCACATACCTGTGGGGGCGGGCGCGCCCTCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGcc     <  1:872258/150‑1 (MQ=255)
                                                                                                                                                    cccTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGcccc   >  1:1298982/1‑150 (MQ=255)
                                                                                                                                                     ccTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGCTCAACCCTCGCTCCCTCAGCCTCCGCAACGccccc  >  1:708896/1‑150 (MQ=255)
                                                                                                                                                     ccTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGccccc  <  2:2009207/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCC  >  NC_002947/5816749‑5817047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.