New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 917692 =101 (1.140)10 (0.120) 6/224 NT 9.8% intergenic (‑123/+76) PP_0798/opdC GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
?NC_002947 917754 = 93 (1.150)intergenic (‑185/+14) PP_0798/opdC GGDEF domain‑containing protein/histidine‑specific outer membrane porin D

Only 100 of 131 total aligned reads displayed.

CGATATTCTAGGGAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCACCGACAGGTCCTTGAGGTCAC  >  NC_002947/917605‑917901
                                                                                                                                                     |                                                                                                                                                    
cgATATTCTAGGGAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTacac                                                                                                                                                      <  2:862409/150‑1 (MQ=255)
 gATATTCTAGGGAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGCAGCCTTCTTCGCGGGTAACCGCTCCTACACt                                                                                                                                                     >  2:1624645/1‑150 (MQ=255)
     ttCTAGGGAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGgca                                                                                                                                                 >  2:850567/1‑150 (MQ=255)
      tCTAGGGAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGgcag                                                                                                                                                <  1:2243066/150‑1 (MQ=255)
       cTAGGGAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGgcagc                                                                                                                                               >  2:659502/1‑150 (MQ=255)
         aGGGAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCaa                                                                                                                                             >  1:522300/1‑150 (MQ=255)
          gggAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCaaa                                                                                                                                            >  2:1775470/1‑150 (MQ=255)
           ggAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTATACTGGCAGCaaaa                                                                                                                                           <  2:1041852/150‑1 (MQ=255)
           ggAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCaaaa                                                                                                                                           >  1:1310184/1‑150 (MQ=255)
              aGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTGACCGCTCCTACACTGGCAGCAAAAGAt                                                                                                                                        <  2:2100231/150‑1 (MQ=255)
               caacagcgacaacgatgaactgcgggtaatcgtcgattacccactgaacgtgttctgatcttttgctgccagTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATc                                                                                                                                       >  2:992697‑M1/73‑150 (MQ=255)
                cGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCa                                                                                                                                      <  1:2130254/150‑1 (MQ=255)
                  ggCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACTGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGa                                                                                                                                    >  1:2361565/1‑150 (MQ=255)
                   gCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGaa                                                                                                                                   <  1:1775470/150‑1 (MQ=255)
                   gCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGaa                                                                                                                                   <  1:1695607/150‑1 (MQ=255)
                      ttGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAacac                                                                                                                               <  2:2104720/150‑1 (MQ=255)
                        caacgatgaactgcgggtaatcgtcgattacccactgaacgtgttctgatcttttgctgccagTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGgca                                                                                                                                                 >  1:1722038‑M1/64‑131 (MQ=255)
                           ggACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCa                                                                                                                          <  1:850567/150‑1 (MQ=255)
                            gACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAg                                                                                                                         >  2:63362/1‑150 (MQ=255)
                            gACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAg                                                                                                                         >  2:1560997/1‑150 (MQ=255)
                                        ccGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATcgac                                                                                                             <  1:1333505/150‑1 (MQ=255)
                                             ggAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTa                                                                                                        >  2:1284834/1‑150 (MQ=255)
                                                   aCGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCa                                                                                                  >  2:856412/1‑150 (MQ=255)
                                                      gtgtACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCa                                                                                                                                      <  2:1934177/112‑1 (MQ=255)
                                                      gtgtACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCa                                                                                                                                      >  1:1934177/1‑112 (MQ=255)
                                                           ccGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGAt                                                                                                                                        >  1:441146/1‑105 (MQ=255)
                                                           ccGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGAt                                                                                                                                        <  2:441146/105‑1 (MQ=255)
                                                             gTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGtt                                                                                        <  1:1988852/150‑1 (MQ=255)
                                                                 ttttCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCg                                                                                    >  2:1137738/1‑150 (MQ=255)
                                                                 ttttCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCg                                                                                    >  2:2356734/1‑150 (MQ=255)
                                                                  tttCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGt                                                                                                                        >  1:1965585/1‑113 (MQ=255)
                                                                  tttCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGt                                                                                                                        <  2:1965585/113‑1 (MQ=255)
                                                                   ttCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCt                                                                                  >  1:1540383/1‑150 (MQ=255)
                                                                    tCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTg                                                                                 >  1:994431/1‑150 (MQ=255)
                                                                     cGATGTGCCGTGGACCCTTTTAGGAGCGGGTTGAACCGCGAACAGCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGGACACTTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGt                                                                                <  2:431847/150‑1 (MQ=255)
                                                                      gATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCaaaa                                                                                                                                           <  2:1601550/91‑1 (MQ=255)
                                                                      gATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCaaaa                                                                                                                                           >  1:1601550/1‑91 (MQ=255)
                                                                      gATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCCTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAg                                                                                                                                          >  1:1907277/1‑92 (MQ=255)
                                                                      gATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCCTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAg                                                                                                                                          <  2:1907277/92‑1 (MQ=255)
                                                                       gatcttttgctgccagtgtaggagcggttacccgcgaagaaggcttcgccggtgttcgcgggtaaacccgctcctacaCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTg                                                                              >  2:992697‑M2/79‑150 (MQ=255)
                                                                        tttGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGgcagca                                                                                                                                              <  2:1930904/86‑1 (MQ=255)
                                                                        tttGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGgcagca                                                                                                                                              >  1:1930904/1‑86 (MQ=255)
                                                                        tttGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAAGATTTTCATTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGc                                                                             >  1:150008/1‑150 (MQ=255)
                                                                         tggCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCt                                                                            <  2:310847/148‑1 (MQ=255)
                                                                               tGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGtcgat                                                                      <  2:770237/150‑1 (MQ=255)
                                                                                 tgccagtgtaggagcggttacccgcgaagaaggcttcgccggtgttcgcgggtaaacccgctcctacaCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTg                                                                                       <  2:1722038‑M2/63‑1 (MQ=255)
                                                                                 gACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATcgac                                                                                                             >  1:1790089/1‑109 (MQ=255)
                                                                                 gACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATcgac                                                                                                             <  2:1790089/109‑1 (MQ=255)
                                                                                   cccTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGAc                                                                  >  2:1327269/1‑150 (MQ=255)
                                                                                    ccTTGTAGGAGCGGGTTTACCCGCGAACCCCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACg                                                                 >  1:1642668/1‑150 (MQ=255)
                                                                                    ccTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAAt                                                                                                                 >  1:2242054/1‑102 (MQ=255)
                                                                                    ccTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGtt                                                                                        <  1:311977/127‑1 (MQ=255)
                                                                                    ccTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGtt                                                                                        >  2:311977/1‑127 (MQ=255)
                                                                                      ttGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTg                                                                                       >  2:1333462/1‑126 (MQ=255)
                                                                                      ttGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTg                                                                                       <  1:1333462/126‑1 (MQ=255)
                                                                                             AGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCt                                                        <  2:108092‑M1/150‑1 (MQ=255)
                                                                                              GCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCTTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTg                                                       <  2:1674111‑M1/150‑1 (MQ=255)
                                                                                              GCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTg                                                       <  2:2383080‑M1/150‑1 (MQ=255)
                                                                                                GGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGc                                                     <  1:1371500‑M1/150‑1 (MQ=255)
                                                                                                 GGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATc                                                                                           <  2:2410416‑M1/111‑1 (MQ=255)
                                                                                                 GGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATc                                                                                           >  1:2410416‑M1/1‑111 (MQ=255)
                                                                                                  gTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGtc                                                                         >  1:1960829/1‑128 (MQ=255)
                                                                                                  gTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGtc                                                                         <  2:1960829/128‑1 (MQ=255)
                                                                                                  gTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGt                                                                          >  2:1922699/1‑127 (MQ=255)
                                                                                                  gTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGt                                                                          <  1:1922699/127‑1 (MQ=255)
                                                                                                  gTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGAGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCt                                                        >  2:2166879/1‑145 (MQ=255)
                                                                                                  gTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGAGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCt                                                        <  1:2166879/145‑1 (MQ=255)
                                                                                                      cctcgaagaaggcttcgccggtgttcgcgggtaaacccgctcctacaCTGGCAGCAAAAGATCAGAACACGTTCAGTgg                                                                                                                      <  1:1621362‑M2/32‑1 (MQ=255)
                                                                                                      ccgcgaagaaggcttcgccggtgttcgcgggtaaacccgctcctacaCTGGCAGCAAAAGATCAGAACACGTTCAGTgg                                                                                                                      >  2:1621362‑M2/48‑79 (MQ=255)
                                                                                                      aCCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCcgc                                               <  1:2383080/150‑1 (MQ=255)
                                                                                                       cgcgaagaaggcttcgccggtgttcgcgggtaaacccgctcctacaCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGATGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCcgcg                                              >  1:694723‑M2/47‑150 (MQ=255)
                                                                                                        ccgcgaagaaggcttcgccggtgttcgcgggtaaccgctcctacaCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCgg                                             >  1:169368‑M2/46‑150 (MQ=255)
                                                                                                        ccgcgaagaaggcttcgccggtgttcgcgggtaaccgctcctacaCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCgg                                             >  1:688366‑M2/46‑150 (MQ=255)
                                                                                                           cgAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCggtgg                                          <  1:1105184/150‑1 (MQ=255)
                                                                                                           cgAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTAGGACGACGCATAACCCTGGCTGCCGCggtgg                                          <  1:63362/150‑1 (MQ=255)
                                                                                                              acacCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCggtgggtg                                       <  1:1137738/150‑1 (MQ=255)
                                                                                                                 ccGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATcgacga                                                                                                           <  1:861225/79‑1 (MQ=255)
                                                                                                                    gCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCgg                                             >  2:1195457/1‑138 (MQ=255)
                                                                                                                    gCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCgg                                             <  1:1195457/138‑1 (MQ=255)
                                                                                                                    gCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCAGCGGTGGGTGGCATAg                                 >  2:1673509/1‑150 (MQ=255)
                                                                                                                     cGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGc                                <  2:1310184/150‑1 (MQ=255)
                                                                                                                         gCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAAAATTCGCTGCCGCGGTGGGTGGCATAGCGTAc                            <  1:1643656/150‑1 (MQ=255)
                                                                                                                           cttcttCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTc                                                                                     <  1:133412/91‑1 (MQ=255)
                                                                                                                           cttcttCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTc                                                                                     >  2:133412/1‑91 (MQ=255)
                                                                                                                           cttcttCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCa                          <  1:1835598/150‑1 (MQ=255)
                                                                                                                            ttcttcGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCTTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAg                         <  1:1674111/150‑1 (MQ=255)
                                                                                                                            ttcttcGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCt                                                                            >  2:156963/1‑99 (MQ=255)
                                                                                                                            ttcttcGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCt                                                                            <  1:156963/99‑1 (MQ=255)
                                                                                                                            ttcttcGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAg                         >  2:186294/1‑150 (MQ=255)
                                                                                                                               ttcGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCAc                      >  2:427181/1‑150 (MQ=255)
                                                                                                                                tcGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACTTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCAcc                     <  2:522300/150‑1 (MQ=255)
                                                                                                                                     ggTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCACCGACAg                <  2:169368/150‑1 (MQ=255)
                                                                                                                                        aaCCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCACCGACAGGTc             >  2:2282436/1‑150 (MQ=255)
                                                                                                                                           cgctcctacaCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCACCGACAGGTCCtt          >  2:2292595‑M2/11‑150 (MQ=255)
                                                                                                                                             cTCCTACACTGGCAGCAAAAGAAAAGACCAACGGTCGTGCATCCTCGGGGATTAGGCGCAGTTCAGCGTTGTCGGTGTGGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCACCGACATGTCCTTGa        <  2:150008/150‑1 (MQ=255)
                                                                                                                                              tcctacaCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCACCGACAGGTCCTTGAg       <  1:1595053‑M2/143‑1 (MQ=255)
                                                                                                                                                ctacaCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCACCGACAGGTCCTTGAGGt     >  1:2103955‑M2/6‑150 (MQ=255)
                                                                                                                                                 tacaCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGt                                                                                >  1:750944‑M2/5‑74 (MQ=255)
                                                                                                                                                   caCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCACCGACAGGTCCTTGAGGTCAc  >  2:1038632‑M2/3‑150 (MQ=255)
                                                                                                                                                   caCTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCACCGACAGGTCCTTGAGGTCAc  <  1:723902‑M2/148‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CGATATTCTAGGGAAGCGGGCATTGTCGGACAAGATTTGTCCGACGGAAGCACGGTGTACCGTACTTTTCGATTTGCCGTGGACCCTTGTAGGAGCGGGTTTACCCGCGAACACCGGCGAAGCCTTCTTCGCGGGTAACCGCTCCTACACTGGCAGCAAAAGATCAGAACACGTTCAGTGGGTAATCGACGATTACCCGCAGTTCATCGTTGTCGCTGTTGCTGTCGATCGACGCATAACCCTGGCTGCCGCGGTGGGTGGCATAGCGTACCAGCACCGACAGGTCCTTGAGGTCAC  >  NC_002947/917605‑917901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.