New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 1799915105 (1.190)19 (0.260) 13/200 NT 18.6% intergenic (+43/‑144) rnhB/dnaEA ribonuclease HII/DNA polymerase III subunit alpha
?NC_002947 = 1799957 81 (1.130)intergenic (+85/‑102) rnhB/dnaEA ribonuclease HII/DNA polymerase III subunit alpha

Only 100 of 176 total aligned reads displayed.

GTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCG  >  NC_002947/1799808‑1800103
                                                                                                                                                      |                                                                                                                                                  
gTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGGGCGAATGCGTCACCGCTTCCCTGTTCTGACGCCATGAGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                                                                                    <  1:1621958/150‑1 (MQ=38)
 cgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTggg                                                                                                                                                   <  1:728552‑M1/66‑1 (MQ=255)
     ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGCACGAAGACGTCACCGAGTCCCTGATCTGCCCTATTGGGGCCGCTTC‑CAACAATGTTTCTTTCTCTCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGACGTGCCTGTGGGAGCg                                                                                                                                               >  1:1151973/1‑150 (MQ=255)
      tggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCgg                                                                                                                                              >  2:728552‑M1/80‑150 (MQ=255)
      tCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgg                                                                                                                                              >  2:1584757‑M2/1‑144 (MQ=255)
      tCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgg                                                                                                                                              >  2:1251647‑M2/1‑144 (MQ=255)
       ggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCggg                                                                                                                                             >  2:360351‑M1/79‑150 (MQ=255)
        gaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGc                                                                                                                                            >  2:1882157‑M1/78‑150 (MQ=255)
          cccGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                                                                                    <  2:1292919/140‑1 (MQ=255)
          cccGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgt                                                                                                                                          <  2:505038‑M2/150‑11 (MQ=255)
            cGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgc                                                                                                                                        <  1:740180‑M2/150‑13 (MQ=255)
                      ggcTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaaggg                                                                                                                              >  2:922265‑M2/1‑128 (MQ=255)
                         ttGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgccc                                                                                                                                      <  2:401421‑M2/139‑15 (MQ=255)
                             gAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCaaa                                                                                                                       <  1:1221994/150‑1 (MQ=255)
                               aGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagc                                                                                                                     <  2:246961/150‑1 (MQ=255)
                                gcgcgcGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagca                                                                                                                    <  2:419719/150‑1 (MQ=255)
                                 cgcgcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagcag                                                                                                                   <  1:306312/150‑1 (MQ=255)
                                             tCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTg                                                                                                                           >  2:1569721/1‑130 (MQ=255)
                                             tCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTg                                                                                                                           <  1:1569721/130‑1 (MQ=255)
                                              cACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                                                                                    >  2:1480284/1‑104 (MQ=255)
                                              cACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                                                                                    <  1:1480303/104‑1 (MQ=255)
                                               aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaa                                                                                                                                 >  1:667886‑M2/1‑103 (MQ=255)
                                               aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                                                                                        <  1:879471/147‑1 (MQ=255)
                                               aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcc                                                                                                     >  2:978052/1‑150 (MQ=255)
                                                ccGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaa                                                                                                                                 >  1:752609‑M2/1‑102 (MQ=255)
                                                ccGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaa                                                                                                                                 <  2:752609‑M2/121‑20 (MQ=255)
                                                ccGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGccc                                                                                                    <  1:837989/150‑1 (MQ=255)
                                                 cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGACTCATCGATCTGATCGGCGGGGCCGTACCTGTGCGAGCACGCGTTCCAGCTAAGGGCTGCAAAGGACCCCCAAAAAAAGcccc                                                                                                   >  2:1067701/1‑150 (MQ=37)
                                                 agcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                                                                                    >  1:228850‑M1/37‑101 (MQ=255)
                                                 agcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                                                                                    <  2:228850‑M1/65‑1 (MQ=255)
                                                   aTTCCCTGACCTGACCTATTGGCGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGTATTAGTCGGTCTGAGCGGTGGGGCCGTACCTGTGGGAGCTGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTa                                                                                                 <  2:1208656/150‑1 (MQ=38)
                                                       ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATGGATCTGAGGGGCGGGGCCGTACCGGTGGGAGCGGGCGTACCCGCGAAGGGCCGCAGAGCAGCCCCAAACAGGGCACCTAGTTa                                                                                             >  1:499237/1‑150 (MQ=37)
                                                       ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                                                                                        <  2:165291/139‑1 (MQ=255)
                                                       ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTa                                                                                             >  2:464487/1‑150 (MQ=255)
                                                          gATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGc                                                                                          >  1:1804840/1‑150 (MQ=255)
                                                              tGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggc                                                                                                                             >  1:1075838‑M2/1‑88 (MQ=255)
                                                              tGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggc                                                                                                                             <  2:1075838‑M2/111‑24 (MQ=255)
                                                              tGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGCATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACa                                                                                      >  1:630562/1‑150 (MQ=255)
                                                                aCCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGGGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGATACaac                                                                                    >  2:863540/1‑149 (MQ=255)
                                                                  cTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgt                                                                                                                                          >  1:454228‑M2/1‑84 (MQ=255)
                                                                   tATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATccc                                                                                 >  1:1527944/1‑150 (MQ=255)
                                                                    aTTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCg                                                                                <  2:1804840/150‑1 (MQ=255)
                                                                        gggCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCt                                                                            >  1:1649435/1‑150 (MQ=255)
                                                                          gCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTg                                                                          >  1:1026924/1‑150 (MQ=255)
                                                                           ccGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGt                                                                         >  2:1821260/1‑150 (MQ=255)
                                                                           ccGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGt                                                                         >  2:382736/1‑150 (MQ=255)
                                                                                   cgGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGc                                                                 >  1:1938164/1‑150 (MQ=255)
                                                                                    ggCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCa                                                                <  2:2270152/150‑1 (MQ=255)
                                                                                     gCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagg                                                                                                                               >  1:1557760‑M2/1‑65 (MQ=255)
                                                                                       CCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTa                                                                    <  1:346481‑M1/143‑1 (MQ=255)
                                                                                       CCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTa                                                                    >  2:346481‑M1/1‑143 (MQ=255)
                                                                                        CT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAAt                                                                                    <  1:1245075‑M1/126‑1 (MQ=255)
                                                                                              CGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACCGCTACAg                                                       >  2:2022904‑M1/1‑150 (MQ=255)
                                                                                                  CACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATc                                                   >  2:1892973‑M1/1‑150 (MQ=255)
                                                                                                   ACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCt                                                  >  1:978052‑M1/1‑150 (MQ=255)
                                                                                                     GCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGTGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTc                                                >  2:768181‑M1/1‑150 (MQ=255)
                                                                                                     GCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTc                                                >  2:1545113‑M1/1‑150 (MQ=255)
                                                                                                      CCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAA‑GCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCa                                              >  1:5392‑M1/1‑150 (MQ=255)
                                                                                                      CCCGCTCTAACAGGATTCATCGGTCTCAGCGGCGGGGCCGTACCTGTGGGAGCGGCCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTcc                                               >  2:630562‑M1/1‑150 (MQ=255)
                                                                                                       CCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcc                                                                                                     <  1:2062526‑M1/95‑1 (MQ=255)
                                                                                                       CCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcc                                                                                                     >  2:2062526‑M1/1‑95 (MQ=255)
                                                                                                       CCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTa                                                                                        >  2:1670684‑M1/1‑108 (MQ=255)
                                                                                                       CCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTa                                                                                        <  1:1670684‑M1/108‑1 (MQ=255)
                                                                                                         gCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaa                                             >  1:2143988‑M2/1‑46 (MQ=255)
                                                                                                         gCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcg                                                                                         >  2:1641834‑M2/1‑46 (MQ=255)
                                                                                                         gCTCTCACAGGAGTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaag                                            <  2:239838‑M2/150‑105 (MQ=255)
                                                                                                          ctctCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttc                                                                              <  2:1404354‑M2/115‑71 (MQ=255)
                                                                                                          ctctCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttc                                                                              >  1:1404354‑M2/1‑45 (MQ=255)
                                                                                                             tcACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggctgcaaagcagccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaac                                        <  1:464906‑M2/150‑109 (MQ=255)
                                                                                                             tcACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaac                                        <  1:51589‑M2/150‑109 (MQ=255)
                                                                                                             tcACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaac                                        <  2:1179829‑M2/150‑109 (MQ=255)
                                                                                                             tcACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggt                                                                                                        <  2:1953475‑M2/86‑45 (MQ=255)
                                                                                                             tcACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggt                                                                                                        >  1:1953475‑M2/1‑42 (MQ=255)
                                                                                                             tcACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTAc                                                         <  1:1819746/133‑1 (MQ=255)
                                                                                                               acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcc                                                                                                     <  2:2004052/87‑1 (MQ=255)
                                                                                                               acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcc                                                                                                     >  1:2004052/1‑87 (MQ=255)
                                                                                                               acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAg                                                                                            >  2:1525532/1‑96 (MQ=255)
                                                                                                               acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAg                                                                                            <  1:1525532/96‑1 (MQ=255)
                                                                                                               acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGt                                                                      <  1:1095395/118‑1 (MQ=255)
                                                                                                               acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGt                                                                      >  2:1095395/1‑118 (MQ=255)
                                                                                                               acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTc                                          <  2:115033/146‑1 (MQ=255)
                                                                                                                 aGGAGTCATCGGTCTGAGCGGCTGGGCCGGACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTcc                                    <  2:1919614/150‑1 (MQ=255)
                                                                                                                        aTCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaacgccgatgaatg                             >  2:51589‑M2/1‑31 (MQ=255)
                                                                                                                        aTCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGccc                                                                                                                <  1:2084443/67‑1 (MQ=255)
                                                                                                                        aTCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCgg                                        >  1:2264127/1‑139 (MQ=255)
                                                                                                                        aTCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCgg                                        <  2:2264127/139‑1 (MQ=255)
                                                                                                                         tCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaacgccgatgaatgg                            >  1:239838‑M2/1‑30 (MQ=255)
                                                                                                                         tCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATccc                                                                                 >  1:1900635/1‑97 (MQ=255)
                                                                                                                             tCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTa                                                                                             >  1:1340067/1‑81 (MQ=255)
                                                                                                                                   cggcggGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGt                  >  1:1842856/1‑150 (MQ=255)
                                                                                                                                          gCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaacgccgatgaatgggcgtaggcccaagacgt           >  2:2097913‑M2/1‑13 (MQ=255)
                                                                                                                                            cGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGACCGCCAAGGAGCCCCAAAAACATGACGTAGGTAGGCTACAAGCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGa         >  1:1502215/1‑150 (MQ=255)
                                                                                                                                             gTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGaa        >  2:1020663/1‑150 (MQ=255)
                                                                                                                                                 cTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCAc              <  2:48433/140‑1 (MQ=255)
                                                                                                                                                 cTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCAc              >  1:48433/1‑140 (MQ=255)
                                                                                                                                                  tgtgGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACa                                                        >  1:390654/1‑97 (MQ=255)
                                                                                                                                                   gtgGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCg  <  1:382736/150‑1 (MQ=255)
                                                                                                                                                   gtgGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCg  <  2:1907495/150‑1 (MQ=255)
                                                                                                                                                      ggAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTc                                >  1:1714914/1‑117 (MQ=255)
                                                                                                                                                      ggAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTc                                <  2:1714914/117‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                  
GTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCG  >  NC_002947/1799808‑1800103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.