| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2032853 = | NA (NA) | 5 (0.060) | 5/234 | NT | 21.7% | coding (291/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase |
| ? | NC_002947 | 2032878 = | 19 (0.210) | coding (316/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase | |||||
TCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTA > NC_002947/2032731‑2032996 | tCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCgg > 1:1246992/1‑150 (MQ=34)tCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCgg > 1:1746356/1‑150 (MQ=35)ctgtagccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCgg < 1:2045870‑M2/3‑1 (MQ=255) tgtagccgcgccacaggccatcgtgaatgctaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggacgtc < 1:697056‑M2/4‑3 (MQ=255) gtagccgcgccacaggccatcgtgaatgcgaccaaccacttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggcgtgtggcaccggccggcc < 2:762697‑M2/5‑1 (MQ=255) aaaaaaCCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGcc > 2:2045172/1‑150 (MQ=33) gccTGATCACCGGGCAAAGCCGGGACATGCCGGTCAACCTCGCCACTAAAGTGGGCCTGCAGGACGCCATCGGGTCAATCTTGAGCGCTGAGATCATCAACGCCTCCGAAGGCCGGGCGGTGCTGCACACCGCCTTGCGTCGGCCTGTAg < 2:918400/149‑1 (MQ=11) cTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGt < 1:1073911/150‑1 (MQ=32) cTGAGCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGGGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGt > 2:706600/1‑150 (MQ=17) gATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGa < 1:9286/150‑1 (MQ=32) ccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGcc > 1:1018448‑M2/137‑141 (MQ=255) ccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGcc < 2:1018448‑M2/5‑1 (MQ=255) aCCGAGCAAAGCCGCGATCTGCTGGTCAACTTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACaaa > 1:2140491/1‑150 (MQ=17) aCCGAGCAAAGCCGCGATCTGCTGGTCAACTTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACaaa < 2:2140491/150‑1 (MQ=17) aCCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGGTGTTCAGCGGTGAGATCATCAACTCCTCCGAAGGCCGTCCGGTGCTCCACACCGCCTTGCGCCGGCCTGTAGGTGACaaa > 1:1420974/1‑150 (MQ=12) ccGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAAc > 1:1960431/1‑150 (MQ=32) cGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCGGGCCTGTAGGTGACAAACt > 2:1586252/1‑150 (MQ=17) cAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGc < 1:538559/150‑1 (MQ=32) cAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGc > 2:797230/1‑150 (MQ=32) aaaGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAg < 1:474926/148‑1 (MQ=32) aaaGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAg > 2:474926/1‑148 (MQ=32) ccGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAg > 2:2180848/1‑144 (MQ=32) ccGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAg < 1:2180848/144‑1 (MQ=32) ccGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCaa > 1:777590/1‑150 (MQ=32) ccGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCaa > 1:1099584/1‑150 (MQ=32) gctgGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACACACTAAGCGTCAACGGCGTGaa > 2:863741/1‑150 (MQ=17) aCCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGc < 1:2045172/150‑1 (MQ=31) tctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCg < 2:1568823‑M2/2‑1 (MQ=255) tctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCg > 1:1568823‑M2/99‑100 (MQ=255) tcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTgg > 2:1272193‑M2/40‑150 (MQ=255) acctacaggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGGTGGTCGCATTCACGATGGCCTGTGgcg > 2:395816‑M2/38‑150 (MQ=255) tacaggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACTATGGCCtgt > 2:691215‑M2/35‑143 (MQ=255) tacaggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACTATGGCCtgt < 1:691215‑M2/109‑1 (MQ=255) aggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTa > 1:1582942‑M2/32‑150 (MQ=255) CGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACtggttg > 2:299295‑M2/1‑88 (MQ=255) CGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACtggttg < 1:299295‑M2/88‑1 (MQ=255) | TCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTA > NC_002947/2032731‑2032996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |