New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 415008558 (0.660)17 (0.230) 10/210 NT 24.2% intergenic (+40/‑357) PP_3654/PP_3655 leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
?NC_002947 = 4150116 57 (0.760)intergenic (+71/‑326) PP_3654/PP_3655 leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein

CAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGC  >  NC_002947/4149976‑4150265
                                                                                                                                            |                                                                                                                                                     
cAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTCTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCCCGCCCGCAAAGGTGACCTAGCCCGTCGCAGTAgcgggttta                                                                                                                                              <  2:391428‑M2/150‑10 (MQ=255)
 aaTGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttac                                                                                                                                             <  2:2011944‑M2/150‑11 (MQ=255)
      gAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcg                                                                                                                                        <  2:1939633‑M2/150‑16 (MQ=255)
       aaaCGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTCTGCCGGCCCCTTCGCGGGTAAACCCCCGCCTGCCCATGTGCATGAGCCCCTCGCAGGAgcgggttcacccgcga                                                                                                                                       <  2:571222‑M2/150‑17 (MQ=255)
                   tCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGccc                                                                                                                           >  1:1555780/1‑150 (MQ=255)
                    cGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCa                                                                                                                          <  1:2003738/150‑1 (MQ=255)
                      cccTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAgg                                                                                                                        >  2:1659425/2‑150 (MQ=255)
                           ggTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAAcc                                                                                                                   <  1:2175891/150‑1 (MQ=255)
                             tgatgaAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTATCCCGTCGCAGTATCGGGTTTACCCGCGAAGAGGCCGGCCCCGCCAACCtt                                                                                                                 >  2:641491/1‑150 (MQ=39)
                               atgaAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTc                                                                                                               <  2:186074/150‑1 (MQ=255)
                                tgaAGGAAGTGATCCAGGATCGGTTGCTCTCTATGTAGTTGTGTTCCGGTGTGCCGGGCGCTTTGCGCGTAAACTCGCGCCTGCAAAGGTGACGTCGCCCGTCGGATGTGCGCGTTTACCCGAGAAGAGGCCGGCCCAGGCAAACTTTCa                                                                                                              <  2:922972/150‑1 (MQ=255)
                                tgaAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCa                                                                                                              <  2:2400537/150‑1 (MQ=255)
                                    ggaagTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCTTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTg                                                                                                          >  1:1937616/1‑150 (MQ=255)
                                    ggaagTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTg                                                                                                          >  1:2161244/1‑150 (MQ=255)
                                      aagTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAACCCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGcc                                                                                                        <  1:928447/150‑1 (MQ=255)
                                      aagTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGcc                                                                                                        <  1:1939633/150‑1 (MQ=255)
                                            tCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaa                                                                                                                                      <  1:691910‑M2/114‑18 (MQ=255)
                                            tCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaa                                                                                                                                      >  2:691910‑M2/1‑97 (MQ=255)
                                              cAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAAc                                                                                                >  1:209760/1‑150 (MQ=255)
                                              cAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCACCAAGAGACCGGCCCACGCAACCCTTCATCTGCCCTGAAAAc                                                                                                >  2:1330891/1‑150 (MQ=255)
                                               aGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAAcg                                                                                               >  1:1335061/1‑150 (MQ=255)
                                                           tCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCAc                                                                                   >  2:1763116/1‑150 (MQ=255)
                                                           tCCCCATGTAGCTGTTTCCTCTTGTGCAGGACCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCAc                                                                                   >  1:1319502/1‑150 (MQ=255)
                                                                aTGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgg                                                                                                                                                   <  2:2146104‑M2/81‑5 (MQ=255)
                                                                aTGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgg                                                                                                                                                   >  1:2146104‑M2/1‑77 (MQ=255)
                                                                aTGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTTCCCGAGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAAcc                                                                              <  2:408404/150‑1 (MQ=255)
                                                                    aGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGc                                                                          <  1:1763116/150‑1 (MQ=255)
                                                                              tctTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCAc                                                                                   <  1:317967/131‑1 (MQ=255)
                                                                              tctTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCAc                                                                                   >  2:317967/1‑131 (MQ=255)
                                                                              tctTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGAt                                                                <  1:2232226/150‑1 (MQ=255)
                                                                              tctTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGAt                                                                >  1:1838296/1‑150 (MQ=255)
                                                                              tctTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGAt                                                                >  2:2160598/1‑150 (MQ=255)
                                                                                ttGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATcc                                                              >  2:1887166/1‑150 (MQ=255)
                                                                                  gtgCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCgg                                                            <  1:2011944/150‑1 (MQ=255)
                                                                                    gCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGtt                                                          <  1:1887166/150‑1 (MQ=255)
                                                                                    gCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGtt                                                          <  1:2160598/150‑1 (MQ=255)
                                                                                       ggCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGcc                                                       <  1:391428/150‑1 (MQ=255)
                                                                                        gCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGATGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCa                                                      >  1:1821679/1‑150 (MQ=255)
                                                                                           ccTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAggc                                                                                                                                 >  2:1431181/1‑72 (MQ=255)
                                                                                           ccTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAggc                                                                                                                                 <  1:1431181/72‑1 (MQ=255)
                                                                                           ccTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCAccc                                                   >  1:834419/1‑150 (MQ=255)
                                                                                                 cgGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCccgccg                                             >  2:1826414/1‑150 (MQ=255)
                                                                                                  gggTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcgagctcaagcgtttcaca                                            <  2:280870‑M2/150‑108 (MQ=255)
                                                                                                  gggTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCcgccgc                                            >  2:51643/1‑150 (MQ=255)
                                                                                                    gTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGccc                                          <  1:1659425/150‑1 (MQ=255)
                                                                                                     tAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCgg                                                            <  2:2103267/131‑1 (MQ=255)
                                                                                                     tAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCgg                                                            >  1:2103267/1‑131 (MQ=255)
                                                                                                        aCCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatca                                                                      <  2:2206292‑M2/118‑82 (MQ=255)
                                                                                                        aCCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatca                                                                      >  1:2206292‑M2/1‑37 (MQ=255)
                                                                                                         cccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaagaggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcgagctcaagcgtttcacattg                                         >  1:511508‑M2/1‑36 (MQ=255)
                                                                                                         cccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaagaggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcgagctcaagcgtttcacattg                                         <  2:511508‑M2/146‑111 (MQ=255)
                                                                                                         cccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaagaggccggcacaagaggaaacagct                                                                                                             >  2:1464775‑M2/1‑36 (MQ=255)
                                                                                                         cccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaagaggccggcacaagaggaaacagct                                                                                                             <  1:1464775‑M2/78‑43 (MQ=255)
                                                                                                         cccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTa                                     >  2:2408046/1‑150 (MQ=255)
                                                                                                          ccGCTCCTGCAAACGTGACGTAGCCCGGCGCAGGAGCGCGTCTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCTCCCCTTGATCCGGTTGCCACCACCGCCGCCCCTCTAc                                    <  1:571222/150‑1 (MQ=255)
                                                                                                          ccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatgggga                                                                                                    <  2:1396650‑M2/86‑52 (MQ=255)
                                                                                                          ccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatgggga                                                                                                    >  1:1396650‑M2/1‑35 (MQ=255)
                                                                                                          ccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaagaggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcgagctcaagcgtttcacattgggaat                                    <  1:117170‑M2/150‑116 (MQ=255)
                                                                                                          ccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaagaggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcac                                                                     >  1:1009477‑M2/1‑35 (MQ=255)
                                                                                                          ccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaagaggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcac                                                                     <  2:1009477‑M2/117‑83 (MQ=255)
                                                                                                          ccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTAc                                    >  2:1587604/1‑150 (MQ=255)
                                                                                                          ccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTAc                                    <  1:2157736/150‑1 (MQ=255)
                                                                                                          ccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTAc                                    >  1:850535/1‑150 (MQ=255)
                                                                                                          ccGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTAc                                    >  1:960847/1‑150 (MQ=255)
                                                                                                            gcgcCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctgg                                                                                      >  2:1617585‑M2/1‑33 (MQ=255)
                                                                                                            gcgcCTGCAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctgg                                                                                      <  1:1617585‑M2/98‑66 (MQ=255)
                                                                                                                cTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAg                              >  2:1813364/1‑150 (MQ=255)
                                                                                                                   cAAAGGTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcgagctcaagcgtttcacattgggaatactggtcag                           >  1:280870‑M2/1‑26 (MQ=255)
                                                                                                                    aaaGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCt                          <  1:1587604/150‑1 (MQ=255)
                                                                                                                     aaGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCtt                         <  2:1937616/150‑1 (MQ=255)
                                                                                                                     aaGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCtt                         <  1:51643/150‑1 (MQ=255)
                                                                                                                       catctcGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACTTCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTca                       <  1:1713915/145‑1 (MQ=255)
                                                                                                                        gTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcgagc                                                          >  2:1596275‑M2/1‑21 (MQ=255)
                                                                                                                        gTGACGTAGCCCGTCGCAGGAgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcgagc                                                          <  1:1596275‑M2/114‑94 (MQ=255)
                                                                                                                             gTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTcagccagc                 >  1:88641/1‑150 (MQ=255)
                                                                                                                             gTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTcag                      <  1:2170896/145‑1 (MQ=255)
                                                                                                                             gTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTcag                      >  2:2170896/1‑145 (MQ=255)
                                                                                                                              tAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCt                <  2:850535/150‑1 (MQ=255)
                                                                                                                               aGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTg               <  2:1319502/150‑1 (MQ=255)
                                                                                                                                gCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGccc                                          >  1:2313124/1‑122 (MQ=255)
                                                                                                                                gCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGccc                                          <  2:2313124/122‑1 (MQ=255)
                                                                                                                                gCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTgg              <  1:537912/150‑1 (MQ=255)
                                                                                                                                gCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTgg              <  2:834419/150‑1 (MQ=255)
                                                                                                                                      cGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCActct        >  1:703304/1‑150 (MQ=255)
                                                                                                                                       ggaggGgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcgagctcaagcgtttcacattgggaatactggtcaggtgctcgtcatacagcttct       >  2:537912‑M2/3‑6 (MQ=255)
                                                                                                                                         aGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCt     <  2:209760/150‑1 (MQ=255)
                                                                                                                                         aGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCAGAAATGACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCt     >  1:1377410/1‑150 (MQ=39)
                                                                                                                                            agcgggtttacccgcgaagaggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcgagctcaagcgtttcacattgggaatactggtcaggtgctcgtcatacagcttctgaaac  >  2:117170‑M2/1‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                                     
CAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGGTTGCCACCCCCGCCGCCCCTCTACCCCAAGGCCTTCAGCCAGCTGGCACTCTCCTTGC  >  NC_002947/4149976‑4150265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.