New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4886209	46 (0.520)	13 (0.190)	10/188	NT	24.1%	intergenic (+43/+80)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 4886238	47 (0.700)					intergenic (+72/+51)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein

CCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTATCGCCGCTGATCCCCA  >  NC_002947/4886090‑4886386                                                                                                                                                     |                                                                                                                                                     ccGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCc                                                                                                                                                     >  2:544555‑M2/1‑149 (MQ=255)     cAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgt                                                                                                                                                 >  1:1549146‑M2/1‑145 (MQ=255)      aGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtg                                                                                                                                                <  2:159105‑M2/150‑7 (MQ=255)      aGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGCAGTGGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCACGCCCGCGCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtg                                                                                                                                                <  1:1267746‑M2/150‑7 (MQ=255)       gTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgg                                                                                                                                               >  2:1436998‑M2/1‑143 (MQ=255)         gATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtggga                                                                                                                                             >  2:1724467‑M2/1‑141 (MQ=255)             aggacGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgg                                                                                                                                         >  1:1913186‑M2/3‑137 (MQ=255)                aCGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgt                                                                                                                                                 <  2:1446582‑M2/139‑6 (MQ=255)                aCGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgt                                                                                                                                                 >  1:1446582‑M2/1‑134 (MQ=255)                          cGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaa                                                                                                                            <  2:560962‑M2/150‑27 (MQ=255)                           gagaCCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaat                                                                                                                           <  2:2188693‑M2/150‑28 (MQ=255)                               ccATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGc                                                                                                                       <  1:2188693/150‑1 (MQ=255)                               ccATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGc                                                                                                                       <  1:1392841/150‑1 (MQ=255)                                catcatTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGcc                                                                                                                      >  2:1627565/1‑150 (MQ=255)                                catcatTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGcc                                                                                                                      >  2:1188264/1‑150 (MQ=255)                                     gaatgaTGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAAc                                                                                                                 >  2:1055124/6‑150 (MQ=255)                                                ttGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATagag                                                                                                      <  1:159105/150‑1 (MQ=255)                                                ttGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAATCCCTGTGCGAGCGGGCGTGCCCGCGAATGGGCGAGAACAGGCAATagag                                                                                                      >  2:1549427/1‑150 (MQ=255)                                                     aGGTTGTGAGCCTGAGGCAGCCTGAACCAACCCGCTGCGCCAGTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTa                                                                                                 <  2:802601/150‑1 (MQ=38)                                                      ggTTGTGGCCCTGAGGCAGCCTGAACCAGCTCGAAGGGCCATGCGCGGGCGAGCCCGCTCCCACGGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGGGGGAGCGGGTTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAg                                                                                                <  2:2397278/150‑1 (MQ=255)                                                        ttGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGc                                                                                              <  1:1055124/150‑1 (MQ=255)                                                          gtgAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgg                                                                                                                                         <  1:882280‑M2/105‑14 (MQ=255)                                                          gtgAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgg                                                                                                                                         >  2:882280‑M2/1‑92 (MQ=255)                                                            gAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCt                                                                                          >  1:40960/1‑150 (MQ=255)                                                                 tGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTAcccc                                                                                     >  2:466809/1‑150 (MQ=255)                                                                        gCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCt                                                                              <  1:560962/150‑1 (MQ=255)                                                                            gAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGccc                                                                          <  1:1147082/150‑1 (MQ=255)                                                                             aaCCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCAGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCg                                                                         >  2:2248457/1‑150 (MQ=255)                                                                               ccATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgc                                                                                                                               >  2:1038259‑M2/1‑71 (MQ=255)                                                                               ccATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgc                                                                                                                               <  1:1038259‑M2/94‑24 (MQ=255)                                                                                cATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAg                                                                      >  1:1634540/1‑150 (MQ=255)                                                                                cATCTCGAAGGGCCATGCGCGGGCAAGCCCACGCCCACAAGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAg                                                                      >  1:1667063/1‑150 (MQ=255)                                                                                  tctcGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGcc                                                                    >  2:941293/1‑150 (MQ=255)                                                                                         gggCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatgggccttcgagatggttcaggctgcctcaggctcacaacctt                                                                                 <  2:33010‑M2/130‑70 (MQ=255)                                                                                         gggCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatgggccttcgagatggttcaggctgcctcaggctcacaacctt                                                                                 >  1:33010‑M2/1‑61 (MQ=255)                                                                                           gCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCAcctcct                                                           <  1:466809/150‑1 (MQ=255)                                                                                           gCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCACGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCAcctcct                                                           <  2:1667063/150‑1 (MQ=255)                                                                                                   cgGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCa                                                   <  1:1627565/150‑1 (MQ=255)                                                                                                     ggCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACGGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATc                                                      <  2:672694/145‑1 (MQ=255)                                                                                                     ggCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACGGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATc                                                      >  1:672694/1‑145 (MQ=255)                                                                                                        aaGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGAt                                              >  2:2035964/1‑150 (MQ=255)                                                                                                         aGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATc                                             <  1:941293/150‑1 (MQ=255)                                                                                                              gCTCCCATAGAATCAACACATGCCTGTGGGTGGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGcaca                                        <  1:1549427/150‑1 (MQ=255)                                                                                                                tCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTACCTGTGGGTGAGGTCTTGCCCGCGAATGGGCCATAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACt                                      >  1:2223747/1‑150 (MQ=255)                                                                                                                  ccACAGGATCACCATACGACTGAAGGTTGTGGAGGCCCTGTGGGAGCGGGCTTGCCCGCGAATGGACCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGc                                    >  2:1955664/1‑150 (MQ=255)                                                                                                                  ccACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatgggccttcgagatggttcaggctgcctcaggctcacaacctttcaagaccatacgaatgatggtctcggccgccgcgtcataatca                                     <  1:1952634‑M2/149‑114 (MQ=255)                                                                                                                  ccACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatggcccttcgagatggttcaggctgcctcaggctcacaacctttcaagaccatacgaatgat                                                              >  2:699381‑M2/1‑36 (MQ=255)                                                                                                                  ccACAGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatggcccttcgagatggttcaggctgcctcaggctcacaacctttcaagaccatacgaatgat                                                              <  1:699381‑M2/124‑89 (MQ=255)                                                                                                                  ccACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGc                                    >  1:206871/1‑150 (MQ=255)                                                                                                                  ccACAGGATCACCACATGCCTGAAGGTTGTGGAGGCcctgtgggagcgggcttgcccgcgaatgggccttcgagatggttcaggctgcctcaggctcacaacctttcaagaccatacgaatgatggtctcggccgccgcgtcataatca                                     >  2:1952634‑M2/1‑36 (MQ=255)                                                                                                                    acaGGATCCCCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCAAGCGTGCGCACGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGcgc                                  >  2:2143833/1‑148 (MQ=255)                                                                                                                    acaGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatggcccttcgagatggttcaggctgcctcaggctcacaacctttcaagaccatacgaatgatggtctcggccgccgcgtcataatcactg                                  <  2:2161747‑M2/150‑117 (MQ=255)                                                                                                                    acaGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATagag                                                                                                      <  2:237187/82‑1 (MQ=255)                                                                                                                    acaGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATagag                                                                                                      >  1:237187/1‑82 (MQ=255)                                                                                                                    acaGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGAGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCTCGGAACTCCACCTCCTCGATCGCACTGATCGCACACTGCtc                                  >  1:127261/1‑150 (MQ=255)                                                                                                                     caGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatggcccttcgagatggttcaggctgcctcaggctcacaccctttcaagaccatacgaatgatggt                                                           >  1:2131925‑M2/1‑33 (MQ=255)                                                                                                                     caGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatggcccttcgagatggttcaggctgcctcaggctcacaacctttcaagaccatacgaatgatggt                                                           >  1:2131756‑M2/1‑33 (MQ=255)                                                                                                                     caGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatggcccttcgagatggttcaggctgcctcaggctcacaacctttcaagaccatacgaatgatggt                                                           <  2:2131925‑M2/124‑92 (MQ=255)                                                                                                                     caGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatggcccttcgagatggttcaggctgcctcaggatcacaacctttcaagaccatacgaatgatggt                                                           <  2:2131756‑M2/124‑92 (MQ=255)                                                                                                                      aGGATCACCACATGCCTGAAGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatggcccttcgagatggttcaggctgcctcaggctcacaacctttcaagaccatacgaatgatggtctcggccgccgcgtcataatcactgtc                                <  1:632056‑M2/150‑119 (MQ=255)                                                                                                                      aGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCtcgt                                >  2:144674/1‑150 (MQ=255)                                                                                                                        gATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCt                                                                              >  2:580923/1‑102 (MQ=255)                                                                                                                        gATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCt                                                                              <  1:580923/102‑1 (MQ=255)                                                                                                                         aTCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGa                             <  1:144674/150‑1 (MQ=255)                                                                                                                             ccacATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTAccc                                                                                      >  2:1995603/1‑89 (MQ=255)                                                                                                                             ccacATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTAccc                                                                                      <  1:1995603/89‑1 (MQ=255)                                                                                                                             ccacATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATc                         >  1:2252641/1‑150 (MQ=255)                                                                                                                              cacaTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATcc                        >  1:567596/1‑150 (MQ=255)                                                                                                                               acaTGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCg                       >  1:2362103/1‑150 (MQ=255)                                                                                                                                     cTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAgg                                                                                                              >  1:1026185/1‑57 (MQ=255)                                                                                                                                     cTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAgg                                                                                                              <  2:1026185/57‑1 (MQ=255)                                                                                                                                     cTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGc                                                                            <  1:175548/91‑1 (MQ=255)                                                                                                                                     cTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGc                                                                            >  2:175548/1‑91 (MQ=255)                                                                                                                                     cTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTAt                 >  1:1292120/1‑150 (MQ=255)                                                                                                                                     cTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCACGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTAt                 >  1:1666352/1‑150 (MQ=255)                                                                                                                                         aGGTTGTGGAGTCcctgtgggagcgggcttgcccgcgaatggcccttcgagatggttcaggctgcctcaggctcacaacctttcaagaccatacgaatgatggtctcggccgccgcgtcataatcactgtcggccagcttggccttaccg             >  1:2161747‑M2/1‑13 (MQ=255)                                                                                                                                         aGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTATcgcc             <  2:2362103/150‑1 (MQ=255)                                                                                                                                           gTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTATcgccgc           >  2:1988018/1‑150 (MQ=255)                                                                                                                                           gTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTATcgccgc           <  1:2045197/150‑1 (MQ=255)                                                                                                                                                 gAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGatat                          >  2:1077747/1‑129 (MQ=255)                                                                                                                                                 gAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGatat                          <  1:1077747/129‑1 (MQ=255)                                                                                                                                                 gAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGata                           >  1:994367/1‑128 (MQ=255)                                                                                                                                                 gAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGata                           <  2:994367/128‑1 (MQ=255)                                                                                                                                                 gAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTATCGCCGCTGATcc     >  1:1976948/1‑150 (MQ=255)                                                                                                                                                 gAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTATCGCCGCTGATcc     <  2:1976948/150‑1 (MQ=255)                                                                                                                                                   gTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTATCGCCGCTg         >  2:1259684/1‑144 (MQ=255)                                                                                                                                                   gTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTATCGCCGCTg         <  1:1259684/144‑1 (MQ=255)                                                                                                                                                    tCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTATCGCCGCTGATCCCCa  <  2:1634540/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CCGACAGTGATTATGACGCGGCGGCCGAGACCATCATTCGTATGGTCTTGAAAGGTTGTGAGCCTGAGGCAGCCTGAACCATCTCGAAGGGCCATTCGCGGGCAAGCCCGCTCCCACAGGATCACCACATGCCTGAAGGTTGTGGAGTCCCTGTGGGAGCGGGCTTGCCCGCGAATGGGCCAGAACAGGCAATAGAGATTTAGGCCGCTACCCCGGCATCTGCCCGCAGCCCCACCTCCTCGATCGCACTGATCGCACACTGCTCGTCGATATCCGACGTATCGCCGCTGATCCCCA  >  NC_002947/4886090‑4886386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.