New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4893598 =59 (0.670)9 (0.130) 8/192 NT 14.6% intergenic (+28/‑180) pyk/PP_4302 pyruvate kinase/urea transporter
?NC_002947 4893677 = 59 (0.860)intergenic (+107/‑101) pyk/PP_4302 pyruvate kinase/urea transporter

Only 100 of 129 total aligned reads displayed.

CCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCACGGCGT  >  NC_002947/4893529‑4893826
                                                                                                                                                     |                                                                                                                                                     
ccGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGAtt                                                                                                                                                      <  2:1566256/150‑1 (MQ=255)
   ggTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGa                                                                                                                                                   <  1:2321381/150‑1 (MQ=255)
    gTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAg                                                                                                                                                  <  1:1180841/150‑1 (MQ=255)
    gTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAg                                                                                                                                                  <  2:909330/150‑1 (MQ=255)
      aCGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAggg                                                                                                                                                <  2:1484879/150‑1 (MQ=255)
        gACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAg                                                                                                                                                  <  2:68847/146‑1 (MQ=255)
        gACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAg                                                                                                                                                  >  1:68847/1‑146 (MQ=255)
        gACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCa                                                                                                                                              >  1:2255519/1‑150 (MQ=255)
                 gCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGGGTTTGGAGGGCAAAGcactcc                                                                                                                                     >  1:272909/1‑150 (MQ=255)
                   tGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGccctccct                                                                                                                                   >  2:2041895/1‑150 (MQ=255)
                         tCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATAc                                                                                                                             <  1:1910840/150‑1 (MQ=255)
                           gagaCTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAg                                                                                                                                                  <  2:1202317/127‑1 (MQ=255)
                           gagaCTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAg                                                                                                                                                  >  1:1202317/1‑127 (MQ=255)
                           gagaCTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCg                                                                                                                           >  1:1558481/1‑150 (MQ=255)
                           gagaCTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCg                                                                                                                           >  1:1176035/1‑150 (MQ=255)
                            agaCTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCCGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGc                                                                                                                          <  1:849231/150‑1 (MQ=255)
                                 ttGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTAc                                                                                                                     <  1:2325558/150‑1 (MQ=255)
                                   taTCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTAccc                                                                                                                   <  1:1478882/149‑1 (MQ=255)
                                     tCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGCCACCAGAACGCT‑CAACACGGGACACGCTCTAACAAAGGAAAGCGAGCCCTTTCGGTGCGGTCGTTGGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGa                                                                                                                 >  2:1478882/1‑150 (MQ=255)
                                     tCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGa                                                                                                                                                   >  1:1534321/1‑116 (MQ=255)
                                     tCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGa                                                                                                                 >  2:1397008/1‑150 (MQ=255)
                                     gtggagaTTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGa                                                                                                                 >  2:309970/4‑150 (MQ=255)
                                           aTTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GAGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCgg                                                                                                           >  2:2222853/1‑150 (MQ=255)
                                                   gggCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGa                                                                                                   <  1:70718/150‑1 (MQ=255)
                                                   gggCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGa                                                                                                   <  1:638465/150‑1 (MQ=255)
                                                    ggCGGGTAGCGCCGTTTTCACGACCCGAGGCCGCTCCACCA‑GCGCCACGTTGGCACAAGGGAACGGCGTCCCTGTGGGAGCGGCCTTGCGGCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGGCCGCGGAGAACCGAg                                                                                                  <  2:726638/150‑1 (MQ=255)
                                                       gcgTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTTGCACAAGGGCATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGcc                                                                                               >  1:430977/1‑150 (MQ=255)
                                                               ccccTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAgg                                                                                       >  2:890015/1‑150 (MQ=255)
                                                               ccccTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAgg                                                                                       <  1:257138/150‑1 (MQ=255)
                                                               ccccTTTCGCGACACAAGGCCGCCCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAgg                                                                                       >  2:958034/1‑150 (MQ=255)
                                                                  cTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGccc                                                                                    >  1:1763515/1‑150 (MQ=255)
                                                                   tttCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCa                                                                                   >  2:1781236/1‑150 (MQ=255)
                                                                    ttCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCAc                                                                                  >  1:1455771/1‑150 (MQ=255)
                                                                       GCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCg                                                                                                                           >  2:340532‑M1/1‑106 (MQ=255)
                                                                       GCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCg                                                                                                                           <  1:340532‑M1/106‑1 (MQ=255)
                                                                       GCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGa                                                                                                                 <  1:1948466‑M1/116‑1 (MQ=255)
                                                                       GCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGa                                                                                                                 >  2:1948466‑M1/1‑116 (MQ=255)
                                                                            ACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGa                                                                                                                                                   >  2:1482258‑M1/1‑77 (MQ=255)
                                                                            ACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTAc                                                                                                                     >  1:671775‑M1/1‑107 (MQ=255)
                                                                            ACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTAc                                                                                                                     <  2:671775‑M1/107‑1 (MQ=255)
                                                                            ACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTcccc                                                                          <  1:1616191‑M1/150‑1 (MQ=255)
                                                                              AAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCa                                                                        <  2:2040672‑M1/150‑1 (MQ=255)
                                                                               AGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCAt                                                                       >  2:1307011‑M1/1‑150 (MQ=255)
                                                                                   ctCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAAc                                                                   >  1:1542152‑M1/3‑150 (MQ=255)
                                                                                     gctcccacagggactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAAcc                                                                  >  2:1211539‑M2/65‑150 (MQ=255)
                                                                                      TCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTc                                                                <  2:1949799‑M1/150‑1 (MQ=255)
                                                                                         ccacagggactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAAc                                                                   <  2:1829110‑M2/85‑1 (MQ=255)
                                                                                         CACA‑GGGCCACGCTTGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGGCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCac                                                             >  1:309970‑M1/1‑150 (MQ=255)
                                                                                         CACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCac                                                             <  1:1938730‑M1/150‑1 (MQ=255)
                                                                                          cacagggactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAgg                                                                                       <  1:1954680‑M2/65‑1 (MQ=255)
                                                                                           acagggactgcattcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCact                                                            >  2:1727014‑M2/59‑150 (MQ=255)
                                                                                              GGGCCACGCTGGAAGAAGGGAATGCAGTCCCTGTGGGACCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCactgac                                                         >  2:272909‑M1/1‑150 (MQ=255)
                                                                                                  cACGCTGGCTCAAGTGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCACGATGGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGcc                                                     >  2:1297754/1‑150 (MQ=255)
                                                                                                   aCGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAACGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGccc                                                    <  1:208434/150‑1 (MQ=255)
                                                                                                     gCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGAGTCGCGATTGGAGGGCCAAGCCCTCCCAGCATACCGCAATACCCGACCGCGGAAAACCGATGGGCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCa                                                  >  2:2078457/1‑150 (MQ=255)
                                                                                                      attcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCAt                                                 <  1:1211539‑M2/103‑1 (MQ=255)
                                                                                                       ttcccttgtgccagcgtggccctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATg                                                <  1:1727014‑M2/104‑1 (MQ=255)
                                                                                                       tGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCTCCGCTCCCCCATCAACCTCCACTGACTGCCCCATg                                                <  1:1397008/150‑1 (MQ=255)
                                                                                                       tGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATg                                                >  2:436266/1‑150 (MQ=255)
                                                                                                          ccacaGGGACTGCATTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAgg                                                                                                 >  2:1146410/5‑98 (MQ=37)
                                                                                                          ccacaGGGACTGCATTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAgg                                                                                                 <  1:1146410/94‑1 (MQ=37)
                                                                                                          cacaAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTac                                             <  1:890015/150‑1 (MQ=255)
                                                                                                           acaAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCATTCCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTaca                                            >  1:1230936/1‑150 (MQ=255)
                                                                                                            caAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTacac                                           <  1:2078457/150‑1 (MQ=255)
                                                                                                            caAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTacac                                           <  1:1781236/150‑1 (MQ=255)
                                                                                                             aaGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCa                                                                        <  1:1611883/120‑1 (MQ=255)
                                                                                                               gggAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGaa                                                                                                                                >  2:2006405/1‑62 (MQ=255)
                                                                                                               gggAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGaa                                                                                                                                <  1:2006405/62‑1 (MQ=255)
                                                                                                                  aaTGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCaaaaa                                     <  1:436266/150‑1 (MQ=255)
                                                                                                                      cAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTc                                 >  2:1819667/1‑150 (MQ=255)
                                                                                                                         tCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGccc                                                    >  1:935523/1‑128 (MQ=255)
                                                                                                                         tCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGccc                                                    <  2:935523/128‑1 (MQ=255)
                                                                                                                         tCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGt                               <  1:1850405/149‑1 (MQ=255)
                                                                                                                         tCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTc                              >  2:908591/1‑150 (MQ=255)
                                                                                                                         tCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTc                              >  1:2062364/1‑150 (MQ=255)
                                                                                                                           cctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAg                                                                                                  <  1:2241545‑M2/54‑1 (MQ=255)
                                                                                                                           cctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAg                                                                                                  >  2:2241545‑M2/27‑80 (MQ=255)
                                                                                                                            ctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAAc                           >  1:58771‑M2/26‑150 (MQ=255)
                                                                                                                            ctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAAc                           >  2:708782‑M2/26‑150 (MQ=255)
                                                                                                                              gtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATCCCGCTCTACCCGCCCGCGATGCACTTAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAAccc                         <  1:2222853‑M2/127‑1 (MQ=255)
                                                                                                                                gggagcggccttgtgtcgcgaTTGGAGGGCCAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGTCAAAAGAGGCCCACCAATCCGAACACAAACACTACGGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGt                       <  1:1023620‑M2/129‑1 (MQ=255)
                                                                                                                                 ggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCACTCCCCCATCAACCTCCACTGACTGCCCCATCTACAACAAAAATTTCGTCAACCCGTg                      >  2:1023620‑M2/21‑150 (MQ=255)
                                                                                                                                  gagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATc                                                                      >  1:1598636‑M2/20‑101 (MQ=255)
                                                                                                                                  gagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATc                                                                      <  2:1598636‑M2/82‑1 (MQ=255)
                                                                                                                                       gccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGa                <  2:58771‑M2/136‑1 (MQ=255)
                                                                                                                                       gccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGa                >  1:1802253‑M2/15‑150 (MQ=255)
                                                                                                                                       gcctggtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGa                >  2:1879113‑M2/15‑150 (MQ=255)
                                                                                                                                        ccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGAc               >  1:1287629‑M2/14‑150 (MQ=255)
                                                                                                                                        ccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGAc               <  1:908591‑M2/137‑1 (MQ=255)
                                                                                                                                         cttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACt              >  2:959234‑M2/13‑150 (MQ=255)
                                                                                                                                          ttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGcc                                                                                     >  1:2327108‑M2/12‑78 (MQ=255)
                                                                                                                                          ttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGcc                                                                                     <  2:2327108‑M2/67‑1 (MQ=255)
                                                                                                                                           tgtgtcgcgaTTGGGGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGAAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCACCCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTgg            <  2:605366‑M2/140‑1 (MQ=255)
                                                                                                                                           tgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCaa                                                                    <  2:2119157‑M2/84‑1 (MQ=255)
                                                                                                                                           tgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTgg            <  1:959234‑M2/140‑1 (MQ=255)
                                                                                                                                               tcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGTCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCa        >  1:2103367‑M2/7‑150 (MQ=255)
                                                                                                                                               tcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCa        <  1:2040672‑M2/144‑1 (MQ=255)
                                                                                                                                               tcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCa        <  1:958034‑M2/144‑1 (MQ=255)
                                                                                                                                                 gcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCactgac                                                         >  2:1573436‑M2/5‑99 (MQ=255)
                                                                                                                                                     ttGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCACGGCGt  <  2:1455771/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACA‑GGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCACGGCGT  >  NC_002947/4893529‑4893826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.