New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 601932688 (0.990)8 (0.110) 7/200 NT 9.7% intergenic (‑71/+74) dadX/dadA‑II alanine racemase/D‑amino acid:quinone oxidoreductase
?NC_002947 = 6019356 78 (1.090)intergenic (‑101/+44) dadX/dadA‑II alanine racemase/D‑amino acid:quinone oxidoreductase

Only 100 of 118 total aligned reads displayed.

TTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTT  >  NC_002947/6019209‑6019501
                                                                                                                                                   |                                                                                                                                                 
ttGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcc                                                                                                                                                 <  2:248671‑M2/150‑3 (MQ=255)
atgtggCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGGTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcc                                                                                                                                                 <  2:1649905‑M2/149‑3 (MQ=255)
     gcgcAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgg                                                                                                                                            >  1:800358‑M2/1‑143 (MQ=255)
     gcgcAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgg                                                                                                                                            >  1:1669638‑M2/1‑143 (MQ=255)
         aGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagc                                                                                                                                        >  2:47168‑M2/1‑139 (MQ=255)
          gggCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcg                                                                                                                                       <  2:2117807‑M2/150‑13 (MQ=255)
               tGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaa                                                                                                                                  <  2:1428046‑M2/150‑18 (MQ=255)
                    gTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaa                                                                                                                                  <  2:2123844‑M2/145‑18 (MQ=255)
                    gTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaa                                                                                                                                  >  1:2123844‑M2/1‑128 (MQ=255)
                      cGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCa                                                                                                                           <  1:1649905/150‑1 (MQ=255)
                       gATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCGCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGAGCAAGGCCGCaa                                                                                                                          >  2:369520/1‑150 (MQ=255)
                         tCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGGCCGCCCCTACGGGTCGTGCACAGCTTTCAAAAGCGGTGGTTTTCCTGTGGGAGCGGGCAAGCCCGCAAAt                                                                                                                        <  2:200059/150‑1 (MQ=255)
                            gggCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATggg                                                                                                                     >  2:76252/1‑150 (MQ=255)
                             ggCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGc                                                                                                                    >  1:361802/1‑150 (MQ=255)
                                   ggcgggACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGcac                                                                                                              >  1:916024/1‑150 (MQ=255)
                                    gcgggACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTTGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGcaca                                                                                                             <  1:1603385/150‑1 (MQ=255)
                                      gggACGCATTGCGGTTGTCTTATGGGGTTTCGCCTTAAAATCGGTGGTGGTTTATTCCCGCGCTTGCCCGCTCCCACAGCTCGTGAACAGCTTTCAAAAGCGGTGCTGTTCCTGTGGGAGCGGGCACGCCCGCAAATGGGCCGGCACAgg                                                                                                           <  1:615529/150‑1 (MQ=255)
                                       ggACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCCTGCACAGCTTTCAAAACCGGTGGTGTTCCTGTGGGAGCGGGCAACCCCGCAAATGGGCCGGCACAGGc                                                                                                          >  1:648481/1‑150 (MQ=255)
                                             aTAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAAt                                                                                                                        <  1:1896964/130‑1 (MQ=255)
                                             aTAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAAt                                                                                                                        >  2:1896964/1‑130 (MQ=255)
                                             aTAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTAc                                                                                                    <  1:1712756/150‑1 (MQ=255)
                                              tAGCGGCTGCCTGATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTAct                                                                                                   >  1:1780886/1‑150 (MQ=255)
                                                gCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgg                                                                                                                                      >  2:1210057‑M2/1‑100 (MQ=255)
                                                gCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgg                                                                                                                                      <  1:1210057‑M2/113‑14 (MQ=255)
                                                gCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgt                                                                                                                                              >  2:1650211‑M2/1‑100 (MQ=255)
                                                   gCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTTAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGGCCGCAAATGGGCCGGCACAGGCTGTTACTGCTgg                                                                                              >  1:850644/1‑150 (MQ=255)
                                                     tGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTgggg                                                                                            >  1:1755737/1‑148 (MQ=255)
                                                       ccTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAgg                                                                                                           >  1:1970745/1‑133 (MQ=255)
                                                       ccTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAgg                                                                                                           <  2:1970745/133‑1 (MQ=255)
                                                           aTGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaa                                                                                                                                  >  1:1846199‑M2/1‑89 (MQ=255)
                                                           aTGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaa                                                                                                                                  <  2:1846199‑M2/106‑18 (MQ=255)
                                                             ggtggtTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTg                                                                                                        <  1:1349596/130‑1 (MQ=255)
                                                              gtggtTCGGGTTGCAATCGGTGGTGGATTATTCGCGGGCTTGGCTGCGCCGTCTGGTGGTGCACAGCTTTCAAAAGCGGTGGGGTTCCTGGGGGCGCGGGCAGGCCCGCAAATGGGCCGGCACGTGCTGTTACTGCTGGTGAGCCGgggc                                                                                   >  2:340832/1‑150 (MQ=255)
                                                                ggtTCGGGTTGAAATCGGTGGTGGATTATGCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGgcgcgc                                                                                 <  1:2084381/150‑1 (MQ=255)
                                                                  ttCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgg                                                                                                                                      <  1:774919‑M2/95‑14 (MQ=255)
                                                                  ttCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgg                                                                                                                                      >  2:774919‑M2/1‑82 (MQ=255)
                                                                   tCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTAAAAAGCGGTTGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCttt                                                                              <  2:106031/150‑1 (MQ=255)
                                                                     gggTTGAACTCGGTGGGGGATTATTCGCGGGCTTGCCCGCTCGCACGGGTCGTGCACGGCTTTCAAAAGGGGTGGTGTTCCTGTGGGGGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGc                                                                            <  2:648481/150‑1 (MQ=39)
                                                                      ggTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggag                                                                                                                                         >  2:1359546‑M2/1‑78 (MQ=255)
                                                                      ggTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggag                                                                                                                                         <  1:1359546‑M2/88‑11 (MQ=255)
                                                                       gTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGccc                                                                          >  1:2144476/1‑150 (MQ=255)
                                                                       gTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGccc                                                                          <  1:76252/150‑1 (MQ=255)
                                                                       gTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGccc                                                                          >  2:351962/1‑150 (MQ=255)
                                                                         tcaaaTCGGTGGTGGCTTACCCGGGGGCTTGCCCGCTCCCTCAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCTTGTGGGAGGGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGt                                                                        <  2:183350/148‑1 (MQ=255)
                                                                         tGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGt                                                                        <  1:2274625/150‑1 (MQ=255)
                                                                              tCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGt                                                                                                       <  1:742835/114‑1 (MQ=255)
                                                                                   ggtggATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTGTGCCCGTGCTTGGCCAc                                                              >  1:1929929/1‑150 (MQ=255)
                                                                                     tggATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaa                                                                                                                                  <  1:367538‑M2/80‑18 (MQ=255)
                                                                                     tggATTATTCGCGGGCCTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGGTcctgcgggagcgggcaacgaatcaaataagacaccaccgatttcaacccgaaacaccataaggcagccgctattcgtcccgcccgcc                                                            <  2:2256963‑M2/150‑88 (MQ=255)
                                                                                      ggATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGc                                                                      >  2:2002490/1‑139 (MQ=255)
                                                                                      ggATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGc                                                                      <  1:2002490/139‑1 (MQ=255)
                                                                                       gATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCACAAGCGGGGGGGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCAGACGCGGATACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGGCACTTcc                                                          >  1:2244045/1‑150 (MQ=38)
                                                                                       gATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTcc                                                          >  2:1983582/1‑150 (MQ=255)
                                                                                       gATTATTCGCGGGCTTGCCCGCCCCCCCAGGTCGGGCACAGCTTTCAAAAGCGGCGGTGTTCCTGTGGGAGCGGGCAAGCCCGCCAATGGGCCCGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCGTTGCCCGTGCTGTGCCACTTcc                                                          >  2:1484190/1‑150 (MQ=37)
                                                                                          tattCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCACGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCgg                                                       <  2:1194316/150‑1 (MQ=255)
                                                                                            ttCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCt                                                     >  1:1656969/1‑150 (MQ=255)
                                                                                            ggagcgGGCAAGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGt                                                                                                       <  2:1123482/97‑1 (MQ=37)
                                                                                               gcgGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagc                                                                                                                                >  2:1480984‑M2/1‑53 (MQ=255)
                                                                                                 gggcgggCCCTCTACCACAGGCGGGGCACAGCGTGCAAGAGCGGTGGGGGTCCTGTTGGAGCGGGCGCGCCCGCAAATGGGCCCGCACAGGCTTTTTCTGCTGGCTAGTCGCCGCGCTTTTCCCCTGCTTGCCCACTTCCCGGCTATTGc                                                <  2:795731/144‑1 (MQ=255)
                                                                                                 gggCTTGCCCGCTCCCACAGGTGGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGc                                                <  1:1049180/150‑1 (MQ=255)
                                                                                                  ggCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGcc                                               <  2:361802/150‑1 (MQ=255)
                                                                                                  ggCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGcc                                               >  1:538473/1‑150 (MQ=255)
                                                                                                   gCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTActg                                                                                                  <  2:1215468/98‑1 (MQ=255)
                                                                                                   gCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTActg                                                                                                  >  1:1215468/1‑98 (MQ=255)
                                                                                                    cTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGGTTTGCCCGTGCTTGGGCACTTCCCGGCTATTGCCAt                                             >  1:620831/1‑150 (MQ=255)
                                                                                                    cTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCAt                                             <  1:351962/150‑1 (MQ=255)
                                                                                                    cTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCAt                                             >  1:601511/1‑150 (MQ=255)
                                                                                                     ttGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATa                                            >  1:623524/1‑150 (MQ=255)
                                                                                                        cccGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACg                                         >  2:1407561/1‑150 (MQ=255)
                                                                                                          cGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGc                                                                      >  1:2305974/1‑119 (MQ=255)
                                                                                                           gCTCCCACAGGTCGTGTACTGCTTGCAGATGCGGTGTTGTTCCTGTGGGTGCGGGCAGGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGga                                      <  1:1484190/150‑1 (MQ=255)
                                                                                                           gCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctccagg                                          >  1:1164227‑M2/1‑41 (MQ=255)
                                                                                                           gCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGga                                      <  2:538473/150‑1 (MQ=255)
                                                                                                             tCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGgaga                                    <  2:601511/150‑1 (MQ=255)
                                                                                                             tCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGgaga                                    >  2:2148694/1‑150 (MQ=255)
                                                                                                              cccACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGat                                   <  1:2148694/150‑1 (MQ=255)
                                                                                                               ccACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAACTGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGata                                  >  2:1178149/1‑150 (MQ=255)
                                                                                                                cacaGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataatgcagccgctatgcgtcccgcccgcgccctgatcgacctccaggccctgcgcc                                 <  1:1472866‑M2/150‑115 (MQ=255)
                                                                                                                cacaGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatc                                                    >  1:1543071‑M2/1‑36 (MQ=255)
                                                                                                                cacaGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGTGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGatat                                 >  2:2145016/1‑150 (MQ=255)
                                                                                                                 acaGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTcctgtgggagcgggcaagcccgcgaataatccaccaccgatttcaacccgaaccaccataaggcagccgctatgcgtcccgcccgcgccctgatcgacctcc                                             <  2:812856‑M2/137‑103 (MQ=255)
                                                                                                                   aGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCa                              <  2:1258344/150‑1 (MQ=255)
                                                                                                                    ggTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAg                             <  1:1428046/150‑1 (MQ=255)
                                                                                                                    ggTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAg                             <  1:1407561/150‑1 (MQ=255)
                                                                                                                     gTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGTACAGGCTGTTActgctg                                                                                               <  2:32989/83‑1 (MQ=255)
                                                                                                                     gTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTActgctg                                                                                               >  1:32989/1‑83 (MQ=255)
                                                                                                                           cacaGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCg                      <  1:1483130/150‑1 (MQ=255)
                                                                                                                                cTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGa                                                                                           <  2:1063537/76‑1 (MQ=255)
                                                                                                                                cTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGa                                                                                           >  1:1063537/1‑76 (MQ=255)
                                                                                                                                cTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACt                 >  1:984598/1‑150 (MQ=255)
                                                                                                                                 tttCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTa                                                                                                     >  2:1291324/1‑65 (MQ=255)
                                                                                                                                 tttCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTa                                                                                                     <  1:1291324/65‑1 (MQ=255)
                                                                                                                                     aaaaGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCt            >  1:1025895/1‑150 (MQ=255)
                                                                                                                                     aaaaGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCt            >  2:1676604/1‑150 (MQ=255)
                                                                                                                                       aaGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGc          <  2:916024/150‑1 (MQ=255)
                                                                                                                                       aaGCGGTGGTCTTCCTGCGGAAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGc          <  2:2244045/150‑1 (MQ=255)
                                                                                                                                              ggtgTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGcttct   >  1:385540/1‑150 (MQ=255)
                                                                                                                                               gtgtTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGcttctt  >  2:1783406/1‑150 (MQ=255)
                                                                                                                                                 gtTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTg                                                                   >  2:449522/1‑83 (MQ=255)
                                                                                                                                                 gtTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTg                                                                   <  1:449522/83‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
TTGTGGCGCAGGGCCTGGAGGTCGATCAGGGCGCGGGCGGGACGCATAGCGGCTGCCTTATGGTGGTTCGGGTTGAAATCGGTGGTGGATTATTCGCGGGCTTGCCCGCTCCCACAGGTCGTGCACAGCTTTCAAAAGCGGTGGTGTTCCTGTGGGAGCGGGCAAGCCCGCAAATGGGCCGGCACAGGCTGTTACTGCTGGTGAGCCGGCGCGCTTTGCCCGTGCTTGGCCACTTCCCGGCTATTGCCATAACGGGAGATATCCAGGCCTTCGGCACTGATCTGCGGCTTCTT  >  NC_002947/6019209‑6019501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.