| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,320,849 | C→A | 9.1% | V145V (GTG→GTT) | PP_2041 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,320,849 | 0 | C | A | 9.1% | 227.5 / 8.7 | 74 | V145V (GTG→GTT) | PP_2041 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (33/34); new base A (2/5); total (35/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
GCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGA > NC_002947/2320707‑2320998 | gCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGTTCGAGGAGCACATGTACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑Ga > 1:1739930/1‑150 (MQ=255) cATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTGGTGCCCAACGCC‑‑Gaa < 1:578233/150‑1 (MQ=255) cATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTGGTGCCCAACGCC‑‑Gaa < 1:2073210/150‑1 (MQ=255) cATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTGGTGCCCAACGCC‑‑Gaa < 2:2341415/150‑1 (MQ=255) aTTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑Gaaa > 1:1143725/1‑150 (MQ=255) cAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCAc < 2:1143725/150‑1 (MQ=255) aGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCAcc < 2:2399871/150‑1 (MQ=255) aGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCAcc > 1:1584495/1‑150 (MQ=255) cggcTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTg < 2:1220973/150‑1 (MQ=255) tCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCa > 2:1749284/1‑150 (MQ=255) gCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGc < 1:2161197/150‑1 (MQ=255) gCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCCCCACGCC‑‑GAAATCCACCTTGCCCAGCTCg > 2:472605/1‑150 (MQ=255) ggCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGAt < 1:1693718/150‑1 (MQ=255) gCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATc < 2:774536/150‑1 (MQ=255) ttCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTGGTGCCCAACGCC‑‑Gaa < 2:602095/126‑1 (MQ=255) ttCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTGGTGCCCAACGCC‑‑Gaa > 1:602095/1‑126 (MQ=255) tCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGcc < 1:2337022/150‑1 (MQ=255) tCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGcc < 1:454934/150‑1 (MQ=255) cAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCGATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGcc > 1:1160327/1‑150 (MQ=255) aaGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGc > 2:994646/1‑143 (MQ=255) aaGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGc < 1:994646/143‑1 (MQ=255) gggCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTcgcg < 1:697432/150‑1 (MQ=255) ggCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGTTACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCgg < 1:1150313/150‑1 (MQ=255) gCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGc > 1:896674/1‑150 (MQ=255) tCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAgg < 2:768445/150‑1 (MQ=255) tCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAg < 1:1348407/146‑1 (MQ=255) tCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAg > 2:1348407/1‑146 (MQ=255) ggCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGGTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATccc > 2:582161/1‑150 (MQ=255) ccGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAgg < 2:640251/141‑1 (MQ=255) ccGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAgg > 1:640251/1‑141 (MQ=255) cccAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGt < 1:316530/150‑1 (MQ=255) ccAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTg > 1:967067/1‑150 (MQ=255) gcaggcCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAGATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCt > 1:1056313/1‑150 (MQ=255) gcaggcCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCt > 2:787837/1‑150 (MQ=255) gcaggcCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCt < 1:1596993/150‑1 (MQ=255) gcaggcCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGG‑‑CCATGCCATGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCt > 1:419791/1‑150 (MQ=255) aggcCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTg > 1:2021684/1‑150 (MQ=255) ggcCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGa < 1:787837/150‑1 (MQ=255) gcCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACACGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGc > 2:519799/1‑105 (MQ=255) gcCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACACGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGc < 1:519799/105‑1 (MQ=255) aaTACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTCGCCACCTTCGCGGCTCATGCCATCCCAAACGGTGAGCTTGATCCCCGGGa > 1:598641/1‑150 (MQ=255) aaTACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTGGTGCCCAACGCC‑‑Gaa < 1:279371/73‑1 (MQ=37) aaTACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTGGTGCCCAACGCC‑‑Gaa > 2:279371/1‑73 (MQ=37) aCAGGTCTTCAGACAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGGCCCGGCGCGGTAG‑‑GTCACCCATTGGGCCCAGCTCGGGCGCCTGGCCACCTTCGAGGCTCAGGCTATCCCAAACGGTGAGCTTGATCCCCGGGAAGc < 1:1749284/150‑1 (MQ=255) aGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGt < 2:967067/150‑1 (MQ=255) aGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGt > 1:413213/1‑150 (MQ=255) ggTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGAt < 1:538505/136‑1 (MQ=255) ggTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGAt > 2:538505/1‑136 (MQ=255) ggAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGACTCAGGCCATCCCACACGGTGAGCTTGCTCCCCGGGAAGCGTccatgggc > 2:53864/1‑150 (MQ=255) gAAAACACGGGCTCGGCGACCACATGGACAAGTTCTGCCGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTgcctgggcc > 1:571642/1‑150 (MQ=255) gggCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATcc < 2:1501539/103‑1 (MQ=255) gggCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATcc > 1:1501539/1‑103 (MQ=255) gCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAatga > 1:2217293/1‑150 (MQ=255) gCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAatga > 1:1275347/1‑150 (MQ=255) cTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAatgat < 2:1739930/150‑1 (MQ=255) tCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAatgatg < 2:769440/150‑1 (MQ=255) tCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAatg < 1:1284831/147‑1 (MQ=255) tCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAatg > 2:1284831/1‑147 (MQ=255) gCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGcc > 2:2164529/1‑150 (MQ=255) cacaTGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGTGTAATGATGGCCGGcaa < 2:2021684/150‑1 (MQ=255) acaTGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGcaac < 2:413213/150‑1 (MQ=255) aTGGACAAGTTCTTCGGCGCTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGcaacaa < 2:1584495/150‑1 (MQ=255) tGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCaacaac < 2:1275347/150‑1 (MQ=255) aCAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAACTCTCCCGTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGt < 2:571642/150‑1 (MQ=255) aCAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGt < 1:258459/150‑1 (MQ=255) aaGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGc > 2:1637965/1‑150 (MQ=255) gTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGt > 1:2049232/1‑88 (MQ=255) gTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGt < 2:2049232/88‑1 (MQ=255) gTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCg > 1:270222/1‑150 (MQ=255) gTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCg > 2:1595511/1‑150 (MQ=255) ttcttcGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGa < 2:49217/150‑1 (MQ=255) ttcttcGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGa > 2:908022/1‑150 (MQ=255) cGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGAGGCAg < 1:472605/150‑1 (MQ=255) ttGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCg > 2:1725257/1‑150 (MQ=255) tgagccacacGCC‑‑GAAAGCCACCTTGCCCAGCTGGATCGCCCGGCCACATTCGCGGCTCAGGCCATCCGAAACGGTGAGCTTGGTCCTCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGCGCCGAGGCAGTGGCgg < 2:598641/143‑1 (MQ=255) cacGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCga < 2:2217293/150‑1 (MQ=255) | GCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCC‑‑GAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGA > NC_002947/2320707‑2320998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |