| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,356,554 | C→A | 5.1% | G104V (GGC→GTC) | PP_2070 ← | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,356,554 | 0 | C | A | 5.1% | 376.7 / 6.5 | 118 | G104V (GGC→GTC) | PP_2070 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (57/55); new base A (3/3); total (60/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.69e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
CATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGC > NC_002947/2356407‑2356693 | cATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCg < 1:2011335/150‑1 (MQ=255) tCCAGGGTCAGGTCCTGGGCCGGGCCCTCCAGGACGCGCCCGCACCAGGCACGCAGGCCTGCGCGCTGCG‑GCGCGGCGCCAGCGGCACCGATCCCCCGGGCGGCAGCGGGTTCGTACAGCACCACCGCCCGCGGAGCCCCGCCGTcgcgg > 2:146552/1‑149 (MQ=255) cAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGACGGCGCGCat > 2:453942/1‑149 (MQ=255) cAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGAGCAGCGCCCGAGCATGCGCGCCGTCGCGCAg > 1:408337/1‑150 (MQ=255) cAGGGTCAGGTCCTGCGCACAGCCCGCCGCCAATCGCTGTCACCAGGCACGCAGGCGTGCGTGTGCCA‑GCCAGTAGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAg < 1:656206/150‑1 (MQ=255) ggTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGtt < 2:1852901/150‑1 (MQ=255) tCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGACGGCGCGCatgctcg < 1:453942/150‑7 (MQ=255) cAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAg < 2:2198871/150‑1 (MQ=255) aGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGc > 1:874202/1‑150 (MQ=255) ggTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCa > 1:1401490/1‑150 (MQ=255) tCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCAcc < 2:2200480/150‑1 (MQ=255) ccTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCAACGATGCGCCGGGCGGCGGCGAGTTAGTCCGGGGGCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCAccc > 1:1141912/1‑150 (MQ=255) tGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGt < 2:118617/150‑1 (MQ=255) ggCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCa > 1:1659537/1‑140 (MQ=255) ccGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGATGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGAcg > 2:1221621/1‑150 (MQ=255) ggTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCTCCCGAGCATCCGCGCCGTCGCGCAGGGTCAGCACCCGTGAcgccc > 2:428157/1‑149 (MQ=255) gTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGAcgccgc < 1:1448270/150‑1 (MQ=255) tCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACgccgcc > 2:729674/1‑150 (MQ=255) tCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACgccgcc > 2:903751/1‑150 (MQ=255) tGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTGAGCACCCGTGACGCCGCCAgg > 1:779526/1‑150 (MQ=255) gCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGc > 1:2054355/1‑131 (MQ=255) gCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGc < 2:2054355/131‑1 (MQ=255) gCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGa > 1:1917130/1‑150 (MQ=255) gCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGa > 2:768156/1‑150 (MQ=255) ggAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCa < 1:729674/150‑1 (MQ=255) gAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCT‑GTGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGc < 1:905694/127‑1 (MQ=255) gAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCT‑GTGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGc > 2:905694/1‑127 (MQ=255) aaGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGt > 1:1030939/1‑150 (MQ=255) tcgcTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTc > 1:825202/2‑150 (MQ=255) gcgcTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTc < 2:1672784/150‑1 (MQ=255) gcgcTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGGTCGTACACGATCAGCGCCGGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGCCGCCGCCAGGATCAGTTc > 2:354250/1‑150 (MQ=255) gcgcTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATAGATGCGCCGGGCGGCGGGGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTc > 1:2101317/1‑150 (MQ=255) gccGCAGCACGCACGCCTGCGTGCCTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGa > 2:1200024/3‑129 (MQ=255) tCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCgcgc > 1:614107/1‑150 (MQ=255) gcagcccgCACGCATGCGTGCCTGGTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCgcag > 2:599852/8‑150 (MQ=255) aCCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCgcagca > 2:85786/1‑150 (MQ=255) cAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAgg > 2:1563325/1‑150 (MQ=255) cAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAgg > 2:1758475/1‑150 (MQ=255) cAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAgg > 1:1847529/1‑150 (MQ=255) aGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGc > 2:1727243/1‑150 (MQ=255) cacgcctgcgtgcctGGTGCGAGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCg < 1:27905/143‑1 (MQ=255) aCGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTc < 1:2081039/135‑1 (MQ=255) ctgcgtgcctGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAg < 2:1142906/102‑1 (MQ=255) ctgcgtgcctGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAg > 1:1142906/3‑104 (MQ=255) gtgcTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGAc < 1:112962/150‑1 (MQ=255) cg‑gcgTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCa < 1:768156/150‑1 (MQ=255) gTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCg > 1:1594766/1‑126 (MQ=255) gTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCg < 2:1594766/126‑1 (MQ=255) gggACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGtt < 2:2029068/148‑1 (MQ=255) gggACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCg < 2:280600/150‑1 (MQ=255) gACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGAt < 1:283231/150‑1 (MQ=255) aCGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGAtg > 1:615056/1‑150 (MQ=255) aCGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCCTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGAtg > 1:2079908/1‑150 (MQ=255) gAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGa > 2:2241818/1‑146 (MQ=255) gAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGa < 1:2241818/146‑1 (MQ=255) aaGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTgg < 2:614107/150‑1 (MQ=255) ggCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCATGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGc > 2:2379680/1‑150 (MQ=255) cATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCAt < 2:1790069/150‑1 (MQ=255) aTCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATc > 1:1699334/1‑150 (MQ=255) aTCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATc > 1:545078/1‑150 (MQ=255) aTCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATc > 2:2387472/1‑150 (MQ=255) aTCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATc < 1:1563325/150‑1 (MQ=255) gATGAGCTGGGCGGCGGCGTGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGag < 2:1944497/150‑1 (MQ=255) ccGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCaa < 2:545078/150‑1 (MQ=255) cGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGCGCAGCAAg < 1:1908947/150‑1 (MQ=255) cGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAg < 1:938444/150‑1 (MQ=255) ggcggcggcGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGt < 1:1576627/150‑1 (MQ=255) cggcggcgAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTgc < 2:1917130/150‑1 (MQ=255) cggcgAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCa < 1:2115207/150‑1 (MQ=255) cggcgAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCa > 1:2123830/1‑150 (MQ=255) ttCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACacgacg < 2:2178187/97‑1 (MQ=255) taaaGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGAGCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGActccg > 2:892376/4‑146 (MQ=255) tACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGAt > 2:341644/1‑95 (MQ=255) tACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGAt < 1:341644/95‑1 (MQ=255) tACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGagca > 1:878646/1‑127 (MQ=255) tACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGagca < 2:878646/127‑1 (MQ=255) tACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACg > 1:492803/1‑150 (MQ=255) aCAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGAc < 1:2283973/145‑1 (MQ=255) aCAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGc < 2:114901/150‑1 (MQ=255) aGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCt > 2:1616371/1‑150 (MQ=255) ggATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCa < 1:1803756/63‑1 (MQ=255) gcaTCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCa > 2:1803756/3‑63 (MQ=255) gATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCttt > 2:895245/1‑150 (MQ=255) gATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCttt < 2:615056/150‑1 (MQ=255) aTCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCg < 2:145485/78‑1 (MQ=255) cAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCATGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCAt < 1:2379680/150‑1 (MQ=255) gcgcCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGc < 1:895245/150‑1 (MQ=255) gcgcCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGc > 2:2022211/1‑150 (MQ=255) gcCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCgg > 1:221486/1‑150 (MQ=255) cccGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTCGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGa < 1:599852/150‑1 (MQ=255) ccGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGtt < 1:333889/95‑1 (MQ=255) ccGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGtt > 2:333889/1‑95 (MQ=255) tgaacctGCGCGACGGCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTc < 2:732164/135‑1 (MQ=255) tgaacctGCGCGACGGCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTc > 1:732164/7‑141 (MQ=255) cGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGac > 1:2203954/1‑72 (MQ=255) cGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGac < 2:2203954/72‑1 (MQ=255) gAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATTCGGatgg < 2:586002/150‑1 (MQ=255) aGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGatggc < 2:1084194/150‑1 (MQ=255) ctGCGCGACGGCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAg > 2:1608402/2‑112 (MQ=255) ctGCGCGACGGCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAg < 1:1608402/111‑1 (MQ=255) | CATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCG‑GCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGGCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGC > NC_002947/2356407‑2356693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |