Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,380,791 G→A 10.0% G138S (GGC→AGC)  oprF → porin F

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,380,7910GA10.0% 351.4 / 22.9 130G138S (GGC→AGC) oprFporin F
Reads supporting (aligned to +/- strand):  ref base G (62/55);  new base A (7/6);  total (69/61)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.81e-01

Only 100 of 135 total aligned reads displayed.

TCGAACACTGCCCTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGAAGCAAGCTGAAGCTG  >  NC_002947/2380644‑2380935
                                                                                                                                                    |                                                                                                                                                
tCGAACACTGCCCTGGACGCCGTTTACCACTGCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTtggcgctggc                                                                                                                                                >  2:1486401/1‑150 (MQ=255)
  gAACACTGCCCTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTtggcgctggcgc                                                                                                                                              >  2:1820131/1‑150 (MQ=255)
      acTGCCCTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCCAGCGCCaac                                                                                                                                          <  1:1473022/150‑2 (MQ=255)
      acTGCCCTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCCAGCGCCaac                                                                                                                                          <  1:632190/150‑2 (MQ=255)
        tGCCCTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTg                                                                                                                                        >  1:1265986/1‑150 (MQ=255)
         gCCCTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCCAGCGCCaacgtt                                                                                                                                       <  2:172810/150‑5 (MQ=255)
          cccTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCaa                                                                                                                                           >  2:1228793/1‑145 (MQ=255)
          cccTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCaa                                                                                                                                           <  1:1228793/145‑1 (MQ=255)
          cccTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGt                                                                                                                                      <  2:1265986/150‑1 (MQ=255)
           ccTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTa                                                                                                                                     <  1:1015556/150‑1 (MQ=255)
            cTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCGATCCGTCCATACGTTTCCGCTGGTTGCTCGCTCCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTAc                                                                                                                                    <  2:478871/150‑1 (MQ=255)
               gACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGAACAGCGTCG‑TGTAGGAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATc                                                                                                                                 >  2:1891547/1‑150 (MQ=255)
                 cGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCAc                                                                                                                               >  2:2220428/1‑150 (MQ=255)
                  gCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCAcc                                                                                                                              <  2:2150648/150‑1 (MQ=255)
                  gCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCAcc                                                                                                                              >  2:1764021/1‑150 (MQ=255)
                  gCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCAcc                                                                                                                              >  2:1215653/1‑150 (MQ=255)
                           cACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTAc                                                                                                                                    >  2:780605/1‑135 (MQ=255)
                           cACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTAc                                                                                                                                    <  1:780605/135‑1 (MQ=255)
                            aCTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTgg                                                                                                                                       >  1:1803437/1‑131 (MQ=255)
                            aCTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCt                                                                                                                    >  2:808456/1‑150 (MQ=255)
                            aCTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCt                                                                                                                    <  2:1196120/150‑1 (MQ=255)
                             cTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTa                                                                                                                   >  1:1558712/1‑150 (MQ=255)
                              ttCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTAt                                                                                                                  >  2:2317774/1‑150 (MQ=255)
                               tCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATg                                                                                                                 <  2:852034/150‑1 (MQ=255)
                               tCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATg                                                                                                                 <  1:552671/150‑1 (MQ=255)
                                 aacaacCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATg                                                                                                                 >  1:76337/1‑148 (MQ=255)
                                 aacaacCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATg                                                                                                                 <  2:76337/148‑1 (MQ=255)
                                  acaacCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGccc                                                                                                              <  2:2343546/150‑1 (MQ=255)
                                   caacCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCg                                                                                                             >  1:601381/1‑150 (MQ=255)
                                       ccGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GGCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGGGCTGGCGCCAAGTGGTACATCACCGACCTGTTCTATGCCCGTGcc                                                                                                         >  1:385994/1‑150 (MQ=255)
                                             gacgCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTAGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTa                                                                                                   <  2:391091/150‑1 (MQ=255)
                                                gCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGaa                                                                                                <  2:2131946/150‑1 (MQ=255)
                                                  tATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGc                                                                                              <  2:2275958/150‑1 (MQ=255)
                                                   aTCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCt                                                                                             <  1:814990/150‑1 (MQ=255)
                                                     ccGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCa                                                                                           <  1:1486401/150‑1 (MQ=255)
                                                      cGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAg                                                                                          >  1:829483/1‑150 (MQ=255)
                                                      cGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAg                                                                                          <  1:1820131/150‑1 (MQ=255)
                                                         ccATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCa                                                                                           <  1:1017014/146‑1 (MQ=255)
                                                         ccATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCa                                                                                           >  2:1017014/1‑146 (MQ=255)
                                                           aTACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGaa                                                                                                >  1:1791243/1‑139 (MQ=255)
                                                           aTACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTacaa                                                                                     >  2:1117111/1‑150 (MQ=255)
                                                           aTACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCGGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGaa                                                                                                <  2:1791243/139‑1 (MQ=255)
                                                            tACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCa                                                                                           >  2:2040126/1‑143 (MQ=255)
                                                               gTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATc                                                                                 >  2:1977751/1‑150 (MQ=255)
                                                               gTTTCCGCTGGTTCCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCAc                                                                                                                               >  1:323854/1‑104 (MQ=255)
                                                                  tCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTtggcgctg                                                                                                                                                  <  2:1065255/82‑1 (MQ=255)
                                                                     gCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCa                                                                            >  1:1103912/1‑149 (MQ=255)
                                                                     gCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCa                                                                            <  2:1103912/149‑1 (MQ=255)
                                                                       tGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAggg                                                                         <  1:1117111/150‑1 (MQ=255)
                                                                                gCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACNACTCCANCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCgc                                                                >  1:1686873/1‑149 (MQ=255)
                                                                                gCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGa                                                                >  1:2328845/1‑150 (MQ=255)
                                                                                 cACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCAcc                                                                                                                              <  1:926957/87‑1 (MQ=255)
                                                                                 cACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCAcc                                                                                                                              >  2:926957/1‑87 (MQ=255)
                                                                                  aCCA‑GTGTCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCa                                                                                           >  2:603165/1‑121 (MQ=255)
                                                                                    cA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTgg                                                            >  1:1563055/1‑150 (MQ=255)
                                                                                    cA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCAACGAATCTCAGTACAACATCGACCAGGGCGACACCGAGTgg                                                            >  1:1934349/1‑150 (MQ=255)
                                                                                     a‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACa                                                                                                                          >  2:1808169/1‑87 (MQ=255)
                                                                                        tCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCAcc                                                                                                                              <  2:1575008/81‑1 (MQ=255)
                                                                                                ccAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGtt                                                                                                                      >  1:159179/1‑81 (MQ=255)
                                                                                                ccAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGtt                                                                                                                      <  2:159179/81‑1 (MQ=255)
                                                                                                ccAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAg                                                                                               >  2:746706/1‑104 (MQ=255)
                                                                                                ccAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAg                                                                                               <  1:746706/104‑1 (MQ=255)
                                                                                                ccAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGt                                                 >  2:652909/1‑150 (MQ=255)
                                                                                                  aGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTg                                               >  1:1341128/1‑150 (MQ=255)
                                                                                                   gACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTgg                                              >  2:130511/1‑150 (MQ=255)
                                                                                                    aCCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGgt                                             <  2:30064/150‑1 (MQ=255)
                                                                                                           gTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGcc                                      <  2:1563055/150‑1 (MQ=255)
                                                                                                                ggTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGgt                                             <  2:717379/138‑1 (MQ=255)
                                                                                                                 gTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACt                                >  2:356693/1‑150 (MQ=255)
                                                                                                                    gTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTcg                             >  2:1327562/1‑150 (MQ=255)
                                                                                                                    gTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTCCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGCGCGTTGGTGTTGGCCTGAACTTcg                             >  2:2375468/1‑150 (MQ=255)
                                                                                                                     tGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTcgg                            <  1:1339612/150‑1 (MQ=255)
                                                                                                                     tGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTcgg                            >  2:249697/1‑150 (MQ=255)
                                                                                                                      gACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTcggc                           <  1:356693/150‑1 (MQ=255)
                                                                                                                      gACCACTCCACCTTCGCCAACGTTGGCGCCAGCGCCaac                                                                                                                                          <  2:1042690/39‑2 (MQ=255)
                                                                                                                      gACCACTCCACCTTCGCCAACGTTGGCGCCAGCGCCaac                                                                                                                                          >  1:1042690/1‑38 (MQ=255)
                                                                                                                          aCTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTa                       >  1:208156/1‑150 (MQ=255)
                                                                                                                           cTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATTCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAg                      >  1:2103475/1‑150 (MQ=255)
                                                                                                                           cTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCa                                                                                           <  2:2193682/81‑1 (MQ=255)
                                                                                                                           cTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCa                                                                                           >  1:2193682/1‑81 (MQ=255)
                                                                                                                              cACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGccc                   >  1:896310/1‑150 (MQ=255)
                                                                                                                                 cTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTTTGAACTCAGTAATCCATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGaa                <  1:1977751/150‑1 (MQ=255)
                                                                                                                                 cTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGaa                <  2:866448/150‑1 (MQ=255)
                                                                                                                                 cTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGaa                <  1:130511/150‑1 (MQ=255)
                                                                                                                                     gCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTg                                               <  1:954207/115‑1 (MQ=255)
                                                                                                                                     gCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTg                                               >  2:954207/1‑115 (MQ=255)
                                                                                                                                      ccAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGa                                                                >  1:1463168/1‑97 (MQ=255)
                                                                                                                                      ccAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGa                                                                <  2:1463168/97‑1 (MQ=255)
                                                                                                                                      ccAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGaagcaag           <  1:1096960/150‑1 (MQ=255)
                                                                                                                                      ccAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGaagcaag           <  1:652909/150‑1 (MQ=255)
                                                                                                                                      ccAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGaagcaag           <  2:206239/150‑1 (MQ=255)
                                                                                                                                        ccacttGGCGCCAGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGtt                                                >  1:1619290/5‑111 (MQ=255)
                                                                                                                                         cacttGGCGCCAGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCa                                                                                           <  2:1537338/64‑1 (MQ=38)
                                                                                                                                         cacttGGCGCCAGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCa                                                                                           >  1:1537338/4‑67 (MQ=38)
                                                                                                                                          acttGGCGCCAGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGAAGCaagctga       >  1:2241832/3‑150 (MQ=255)
                                                                                                                                           gTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTgg                                                            <  1:559655/96‑1 (MQ=255)
                                                                                                                                            ttGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGAAGCaagctgaag     <  1:2129387/150‑1 (MQ=255)
                                                                                                                                            ttGGCGCCAGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGAAGCaagctgaag     >  2:2401117/1‑150 (MQ=255)
                                                                                                                                            ttGGCGCCAGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGAAGCaagctgaag     >  1:825438/1‑150 (MQ=255)
                                                                                                                                               gcgctggcgcCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGAAGCaagctgaagctg  <  1:1276137/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
TCGAACACTGCCCTGGACGCCGTTTACCACTTCAACAACCCGTACGACGCTATCCGTCCATACGTTTCCGCTGGTTTCTCGCACCA‑GTCGCTGGGCCAGACCGGCCGTGGCGGTCGTGACCACTCCACCTTCGCCAACGTTGGCGCTGGCGCCAAGTGGTACATCACCGACATGTTCTATGCCCGTGCCGGCGTAGAAGCTCAGTACAACATCGACCAGGGCGACACCGAGTGGGCCCCGAGCGTTGGTGTTGGCCTGAACTTCGGCGGTAGCCCGAAGCAAGCTGAAGCTG  >  NC_002947/2380644‑2380935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑