BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,392,660	C→G	7.0%	I382M (ATC→ATG)	PP_2097 →	sensory box protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,392,660	0	C	G	7.0%	358.4 / 15.3	116	I382M (ATC→ATG)	PP_2097	sensory box protein
Reads supporting (aligned to +/- strand): ref base C (60/47); new base G (4/4); total (65/51)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.38e-01

Only 100 of 119 total aligned reads displayed.

TGCTCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCTTGA  >  NC_002947/2392515‑2392808

tgctCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑g                                                                                                                                                   >  1:336916/1‑150 (MQ=255)

tgctCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑g                                                                                                                                                   >  1:1445556/1‑150 (MQ=255)

     tACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑Gccacc                                                                                                                                              >  1:2217789/1‑150 (MQ=255)

       cAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCaa                                                                                                                                            >  2:2098465/1‑150 (MQ=255)

        aGCCTGTTCAGCCAGCGTCATCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATGATC‑Gccacctgg                                                                                                                                           <  1:735373/150‑4 (MQ=255)

        aGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAAc                                                                                                                                           <  2:1469779/150‑1 (MQ=255)

         gCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATGATC‑Gccacctggg                                                                                                                                          <  1:2102106/150‑5 (MQ=255)

          ccTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCt                                                                                                                                         >  2:1741357/1‑150 (MQ=255)

             gTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCaa                                                                                                                                      <  1:400839/150‑1 (MQ=255)

             gTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCaa                                                                                                                                      >  1:1594344/1‑150 (MQ=255)

                 cgccctcGTTAGCACGCGCCGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAgggg                                                                                                                                  <  2:1943056/144‑1 (MQ=255)

                 agccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAgggg                                                                                                                                  <  2:309645/150‑1 (MQ=255)

                  gccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAggggg                                                                                                                                 >  1:113986/1‑150 (MQ=255)

                   ccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGggt                                                                                                                                <  2:1852045/150‑1 (MQ=255)

                    cagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGggtg                                                                                                                               <  2:2217789/150‑1 (MQ=255)

                        gTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGggtggcga                                                                                                                           <  2:2159428/150‑4 (MQ=255)

                          cAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGc                                                                                                                         <  1:1083022/150‑1 (MQ=255)

                            gcgcgcCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATGATC‑Gccacct                                                                                                                                             <  2:2316946/128‑2 (MQ=255)

                            gcgcgcCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCAc                                                                                                                       >  2:1100951/1‑150 (MQ=255)

                             cgcgcCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACg                                                                                                                      >  2:1075200/1‑150 (MQ=255)

                              gcgcCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGt                                                                                                                     <  2:854109/150‑1 (MQ=255)

                               cgcCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGtt                                                                                                                    <  2:113986/150‑1 (MQ=255)

                                  cctggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTTGGTGGCACGCACAACCAACTGCGCAGTGTACTGGATGCCGCGACCTAGGTAGCGATCATC‑GCCACCAACATCAAGGGGGTGGTCAACACGTTTaa                                                                                                                 >  1:70896/1‑150 (MQ=255)

                                  cctggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAg                                                                                                                                     >  1:367960/1‑130 (MQ=255)

                                  cctggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAg                                                                                                                                     <  2:367960/130‑1 (MQ=255)

                                  cctggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCaa                                                                                                                 >  2:2159252/1‑150 (MQ=255)

                                   ctggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAAc                                                                                                                >  2:1258892/1‑150 (MQ=255)

                                        cctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAg                                                                                                                                     <  1:2275957/124‑1 (MQ=255)

                                        cctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCgg                                                                                                           >  2:1330958/1‑150 (MQ=255)

                                             tCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCg                                                                                                      >  1:597187/1‑150 (MQ=255)

                                                          tGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCCCCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCgg                                                                                        >  2:120336/1‑150 (MQ=255)

                                                          tGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGA‑CTGCtacg                                                                                        >  2:2066197/1‑147 (MQ=255)

                                                          tGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGAACCAGGTGCCGATCCTC‑CCCACCGACCTCACCGGCACAATCAGGGCGGTCTGGGGCGGGGCCGAACGC‑ATGCTCgg                                                                                        >  2:528838/1‑150 (MQ=255)

                                                           gCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGt                                                                                       >  1:1058198/1‑150 (MQ=255)

                                                            ccGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAAc                                                                                                                                           <  1:1891106/98‑1 (MQ=255)

                                                            ccGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGggtg                                                                                                                               >  2:455185/1‑110 (MQ=255)

                                                            ccGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCAACAACCAACTGCCCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGtt                                                                                      >  1:658649/1‑150 (MQ=255)

                                                             cGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTa                                                                                     >  2:1013554/1‑150 (MQ=255)

                                                                gTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTAcgc                                                                                  <  2:336916/150‑1 (MQ=255)

                                                                   gCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGc                                                                               >  1:57611/1‑150 (MQ=255)

                                                                    cAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCGGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTAAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGcc                                                                              >  2:1067317/1‑150 (MQ=255)

                                                                    cAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGcc                                                                              >  1:1882128/1‑150 (MQ=255)

                                                                     aGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCa                                                                             >  1:791620/1‑150 (MQ=255)

                                                                     aGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCa                                                                             <  1:1100951/150‑1 (MQ=255)

                                                                      ggTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCag                                                                            >  1:2395332/1‑150 (MQ=255)

                                                                       gTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCagc                                                                           >  1:87011/1‑150 (MQ=255)

                                                                          aGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑At                                                                                              <  2:787480/128‑1 (MQ=255)

                                                                          aGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑At                                                                                              >  1:787480/1‑128 (MQ=255)

                                                                          aGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCagcgaa                                                                        <  2:1743678/150‑1 (MQ=255)

                                                                           gCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCagcgaag                                                                       >  2:919063/1‑150 (MQ=255)

                                                                           gCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCagcgaag                                                                       <  2:35885/150‑1 (MQ=255)

                                                                             gAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAgggg                                                                                                                                  <  1:967748/90‑1 (MQ=255)

                                                                                 aGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCg                                                                 >  2:2403193/1‑150 (MQ=255)

                                                                                   tCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGc                                                               <  1:967235/150‑1 (MQ=255)

                                                                                   tCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGc                                                               <  2:597187/150‑1 (MQ=255)

                                                                                   tCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGc                                                               <  2:1594344/150‑1 (MQ=255)

                                                                                    cGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGcc                                                              <  1:919063/150‑1 (MQ=255)

                                                                                     gTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCg                                                             >  2:1312730/1‑150 (MQ=255)

                                                                                            ggCACCCACAACCAACTGCGTAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTgcgc                                                      <  2:449611/150‑1 (MQ=255)

                                                                                               aCCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCtt                                                   >  2:2169980/1‑150 (MQ=255)

                                                                                                  cacaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCATCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGaa                                                <  1:1141332/150‑1 (MQ=255)

                                                                                                  cacaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGaa                                                >  2:1383546/1‑150 (MQ=255)

                                                                                                  cacaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGATCGGTTACCCCGCCGGCGAAGCGAACGTCCGGTTGCGCCTTGaa                                                >  2:1230738/1‑150 (MQ=255)

                                                                                                   acaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAg                                               >  1:716022/1‑150 (MQ=255)

                                                                                                   acaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAg                                               >  2:1137943/1‑150 (MQ=255)

                                                                                                    caaccaacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGa                                              <  2:716022/150‑1 (MQ=255)

                                                                                                     aagcaacTGCGCAGTGTGCTGGATGCCCCGCCCCCGG‑CGCAGCCAGCAGCCACCAACCTCAAGGGGGTGTGCAGGACGTTCAACGCCGGTGCCG‑GCGCTATGTTCGGGTACGCGGCCAGCGAAGCGAGCGGCCGGTTGCGCCTTGAAGAc                                             >  1:1854697/4‑150 (MQ=255)

                                                                                                     aaccaacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTTTCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGAc                                             <  1:1330958/150‑1 (MQ=255)

                                                                                                       ccaacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATAATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCt                                           >  1:561412/1‑150 (MQ=255)

                                                                                                        caacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGGGAACATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTg                                          <  1:1230738/150‑1 (MQ=255)

                                                                                                        caacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGcc                                                                                                             >  1:2211931/1‑84 (MQ=255)

                                                                                                        caacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGcc                                                                                                             <  2:2211931/84‑1 (MQ=255)

                                                                                                        caacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTg                                          >  1:1797539/1‑150 (MQ=255)

                                                                                                             gcgcAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACt                                     <  2:2103463/150‑1 (MQ=255)

                                                                                                              cgcAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAgggg                                                                                                                                  >  2:1164708/1‑57 (MQ=255)

                                                                                                               gcaggttgCTTGACGCGGCGACCCAGGTGGCGACCACC‑GACACCAACCTCGAGGGCGGGGTCAGCACGTTCAACGCTGGTGCCGAGCGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGTTTGCGCCTTTAAGACCTGGTACTGc                                   <  2:844796/144‑1 (MQ=255)

                                                                                                                       cTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGgaggag                           <  1:1137943/150‑1 (MQ=255)

                                                                                                                       cTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGgaggag                           <  1:2159252/150‑1 (MQ=255)

                                                                                                                         ggATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGggt                                                                                                                                <  2:587853/48‑1 (MQ=255)

                                                                                                                         ggATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGggt                                                                                                                                >  1:587853/1‑48 (MQ=255)

                                                                                                                          gATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTg                        >  2:660584/1‑150 (MQ=255)

                                                                                                                             gCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAAc                     <  2:1445556/150‑1 (MQ=255)

                                                                                                                               gctgACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCt                   >  1:1289823/4‑150 (MQ=255)

                                                                                                                               cgcgACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCt                   <  1:2403193/150‑1 (MQ=255)

                                                                                                                               cgcgACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCt                   >  2:2003977/1‑150 (MQ=255)

                                                                                                                                 cgACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGc                 <  1:530259/150‑1 (MQ=255)

                                                                                                                                 cgACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGc                 <  1:1312730/150‑1 (MQ=255)

                                                                                                                                     gtaGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTc                                                                                          >  1:1286489/3‑73 (MQ=255)

                                                                                                                                     ccAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGc             >  2:43695/1‑150 (MQ=255)

                                                                                                                                     ccAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGc             >  1:1795607/1‑150 (MQ=255)

                                                                                                                                        ggTGGCGATGATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATAGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCa          >  2:1271413/1‑150 (MQ=255)

                                                                                                                                         gTGGCGATGATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAg         >  1:1526808/1‑150 (MQ=255)

                                                                                                                                         gTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAg         >  1:1525711/1‑150 (MQ=255)

                                                                                                                                           ggCGATGATC‑GCCACCTACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGACGCTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGc       <  1:172947/150‑1 (MQ=255)

                                                                                                                                           ggCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGc       <  2:616331/150‑1 (MQ=255)

                                                                                                                                              gATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAAACTGCGTGCCCAGGCCtt    >  2:626191/1‑150 (MQ=255)

                                                                                                                                              gATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAACACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGccgt    <  2:87011/150‑3 (MQ=255)

                                                                                                                                                tcatc‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCt                                           <  1:1781088/109‑1 (MQ=255)

                                                                                                                                                tcatc‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCt                                           >  2:1781088/1‑109 (MQ=255)

                                                                                                                                                tcatc‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCTTGa  <  2:1882128/150‑1 (MQ=255)

TGCTCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATC‑GCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGC‑ATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCTTGA  >  NC_002947/2392515‑2392808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`