| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,443,543 | T→A | 5.9% | F6I (TTT→ATT) ‡ | PP_2140 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,443,543 | 0 | T | A | 5.9% | 264.3 / 6.8 | 84 | F6I (TTT→ATT) ‡ | PP_2140 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (38/41); new base A (3/2); total (41/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.82e-01 | |||||||||||
GATCCGCTACAGCCGCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGAGTCCATGGCCAAGGCTGAAC > NC_002947/2443398‑2443687 | gATCCGCTACAGCCGCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGc < 1:1939044/150‑1 (MQ=255)gATCCGCTACAGCCGCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGc < 1:1518076/150‑1 (MQ=255) ccGCTACAGCCGCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGc < 2:907645/150‑1 (MQ=255) gCTACAGCCGCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGccc > 1:757435/1‑150 (MQ=255) cTACAGCCGCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGcccc > 1:2378146/1‑150 (MQ=255) cAGCCGCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCAAAGCGGCCCC‑aaa < 1:320515/150‑2 (MQ=255) cggaaGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCAtt < 2:555523/147‑1 (MQ=255) gCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGGTAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCAttt > 2:186493/1‑150 (MQ=255) gCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGGTAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCAttt < 1:186493/150‑1 (MQ=255) gCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCAttt > 2:2342522/1‑150 (MQ=255) ccAAGGAGAAGTATGTGTAGAGCGCTTTTTATTTCATGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTatgatg < 2:1123262/150‑1 (MQ=255) cAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGc > 2:2030663/1‑150 (MQ=255) cAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGc > 2:1414342/1‑150 (MQ=255) gAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGat < 1:401395/150‑1 (MQ=255) gCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AAt < 2:1624994/132‑1 (MQ=255) gCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AAt > 1:1624994/1‑132 (MQ=255) aGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATcc < 1:1031777/150‑1 (MQ=255) aGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATcc < 1:2030663/150‑1 (MQ=255) gTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCg > 2:474484/1‑150 (MQ=255) gTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCg > 2:66604/1‑150 (MQ=255) tgCAGTCCGAAGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTAAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTg > 2:353194/1‑150 (MQ=255) tcggggTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCt > 2:1794809/5‑150 (MQ=255) cGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCtt > 2:2107123/1‑142 (MQ=255) cGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCtt < 1:2107123/142‑1 (MQ=255) cGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCtt < 2:757435/150‑1 (MQ=255) cGAGGTCGATGGCAAGCCGACCGGCTGCAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATcc < 1:933804/137‑1 (MQ=255) cGAGGTCGATGGCAAGCCGACCGGCTGCAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATcc > 2:933804/1‑137 (MQ=255) aaGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATcc > 2:927639/1‑124 (MQ=255) aaGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATcc < 1:927639/124‑1 (MQ=255) aaGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACt > 2:2406085/1‑150 (MQ=255) gCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGc > 1:1596281/1‑96 (MQ=255) gCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGc < 2:1596281/96‑1 (MQ=255) ccGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATgg < 1:474484/150‑1 (MQ=255) cTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCa < 1:1414342/150‑1 (MQ=255) cTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCa < 2:2378146/150‑1 (MQ=255) tGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGGTGATGCATTTGTGCTGTGATTTGGGGGCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAg < 2:1642903/150‑1 (MQ=255) aaGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCTTTATGGGAGGGCACTGAAATTGCCCAGGaa > 2:554194/1‑150 (MQ=255) aaGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAgg > 2:114658/1‑130 (MQ=255) aaGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAgg < 1:114658/130‑1 (MQ=255) aaGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGaa > 1:825058/1‑150 (MQ=255) gCATTCTACGACGGCAATGCCTGGACGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAActc < 1:1212098/150‑1 (MQ=255) cgGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTac < 1:66604/150‑1 (MQ=255) cAATGCCTGGAAGGTTGAAGATAAGCGCTGATACATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑CATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAAGTCTACACCCGtccgaa > 2:432553/1‑145 (MQ=255) aaTGCCTGGAAGGTTAAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTaccaac < 1:353194/150‑1 (MQ=255) tGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGCGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGAAAAGGCACTGAAATGGCCCAGGAACTCTACACCCGTaccaacca < 1:2109607/150‑1 (MQ=255) cTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGaa > 1:2307723/1‑150 (MQ=255) tGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACt < 2:293181/111‑1 (MQ=255) tGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACt > 1:293181/1‑111 (MQ=255) tGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGtaa < 1:2406085/150‑1 (MQ=255) ggAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAAc < 1:1137053/150‑1 (MQ=255) gAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTac > 1:458298/1‑138 (MQ=255) gAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTac < 2:458298/138‑1 (MQ=255) ggTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGtt < 1:37098/150‑1 (MQ=255) gTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGttc > 2:52392/1‑150 (MQ=255) ttGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGa < 2:361792/97‑1 (MQ=255) ttGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGa > 1:361792/1‑97 (MQ=255) aaGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGcc < 2:2107585/78‑1 (MQ=255) aaGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGcc > 1:2107585/1‑78 (MQ=255) gcTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AAAAATAACAGCTGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCg > 2:1191997/1‑150 (MQ=255) gATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAActc > 2:2379605/1‑107 (MQ=255) gATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAActc < 1:2379605/107‑1 (MQ=255) aTCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCt > 1:2126449/1‑150 (MQ=255) cATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATgg < 2:1626652/76‑1 (MQ=255) cATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATgg > 1:1626652/1‑76 (MQ=255) cATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGa < 2:2307723/150‑1 (MQ=255) cATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGa < 2:480732/150‑1 (MQ=255) ttGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTa > 1:2227181/1‑103 (MQ=255) ttGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTa < 2:2227181/103‑1 (MQ=255) gCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTg > 1:101701/1‑120 (MQ=255) gCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTg < 2:101701/120‑1 (MQ=255) gCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGAGTCCATg < 1:1282682/150‑1 (MQ=255) tgtgATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGAGTCCATGGc > 2:1170544/1‑150 (MQ=255) tgtgATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGAGTCCATGGc > 1:537438/1‑150 (MQ=255) aatgattGGGGCCGCAAAGCGGCCCCAAATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGAGTCCATGGc > 2:723364/6‑150 (MQ=255) attGGGGCCGCAAAGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTc > 2:432603/2‑134 (MQ=255) attGGGGCCGCAAAGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTc < 1:432603/133‑1 (MQ=255) ttGGGGCCGCAAAGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGAGTCCATGGCCAAGGc > 2:1294633/1‑150 (MQ=255) gCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACAccc < 2:2289516/90‑1 (MQ=255) gCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACAccc > 1:2289516/1‑90 (MQ=255) gCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGt < 1:2325149/108‑1 (MQ=255) gCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGt > 2:2325149/1‑108 (MQ=255) gCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGAGTCCATGGCCAAGGCTg > 1:954471/1‑147 (MQ=255) gCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGAGTCCATGGCCAAGGCTg < 2:954471/147‑1 (MQ=255) gCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGAGTCCATGGCCAAGGCTGAAc > 2:1513350/1‑150 (MQ=255) | GATCCGCTACAGCCGCAAGACCAAGGAGCAGTATGTGCAGTCCGAGGTCGATGGCAAGCCGACCGGCTGGAAGGCATTCTACGACGGCAATGCCTGGAAGGTTGAAGATAAGCGCTGATCCATTGGTGCTGTGATTTGGGGCCGCTTTGCGGCCCC‑AATCATTTATGATGCAGATATCCGCCTTGTAGCCTTATGGGAGGGCACTGAAATGGCCCAGGAACTCTACACCCGTACCAACCAGAAACTGTTCTTCGCCGGCCTCGCCCTCGAGTCCATGGCCAAGGCTGAAC > NC_002947/2443398‑2443687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |