| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,456,930 | T→A | 5.1% | intergenic (+138/‑43) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,456,930 | 0 | T | A | 5.1% | 345.4 / 6.8 | 117 | intergenic (+138/‑43) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (55/56); new base A (3/3); total (58/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.12e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
TTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCA > NC_002947/2456781‑2457063 | ccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGtt > 1:2019882‑M1/97‑150 (MQ=255) ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAc < 1:1262580/150‑1 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTAAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc > 2:2215441/1‑150 (MQ=255) cGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcg > 1:232539/1‑150 (MQ=255) gCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcgc > 2:957433/1‑150 (MQ=255) tGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCACGGGTAACCCCGATC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCTGCGa > 2:798943/1‑150 (MQ=255) ttCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTCCCCCTGTACGAGCTGGTTTACCCGCGAaga < 2:636592/150‑1 (MQ=255) tCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCGTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAagag < 2:120214/150‑1 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAaga > 2:975037/1‑147 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAaga < 1:975037/147‑1 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGc < 2:1332885/150‑1 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGc < 2:232539/150‑1 (MQ=255) ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc > 2:139295/1‑140 (MQ=255) ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc < 1:139295/142‑3 (MQ=255) gCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACGCGCGAAGAGGCCAGCACCgg > 1:787546/1‑150 (MQ=255) cAATGAAAAAACGGGAACCTTCGGTTTCCCTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGc < 1:1877426/150‑1 (MQ=255) tGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAAc < 1:624934/150‑1 (MQ=255) aaaaaCGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga < 2:740480/150‑1 (MQ=255) gggAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AAcc > 1:28910/1‑150 (MQ=255) gggAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AAcc > 2:1294114/1‑150 (MQ=255) ggAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AAccc > 1:1547178/1‑150 (MQ=255) aaCCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCACCAC‑GGATTATCGCTGCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTa < 1:1975068/150‑1 (MQ=39) aaCCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTa < 1:379120/150‑1 (MQ=255) ccTTCGGGTTCCCGTTTTTTTTTGTTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCAGCACCGGCAACCGAGA‑AACCCTACt < 2:1482014/150‑1 (MQ=255) cTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACtg > 1:570831/1‑150 (MQ=255) cTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCAGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc < 2:338879/116‑3 (MQ=38) cTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCAGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc > 1:338879/1‑114 (MQ=38) ttCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACtgt > 1:1918710/1‑150 (MQ=255) ttCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACtgt < 1:2129249/150‑1 (MQ=255) cGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTgc < 1:2359338/150‑1 (MQ=255) cGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTgc < 1:367973/150‑1 (MQ=255) gggTTCCCGTTTTTTTTTATTCTTAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTgcg > 2:2090705/1‑150 (MQ=255) ccGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGc < 2:570831/150‑1 (MQ=255) tttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTa < 1:2212809/130‑1 (MQ=255) tttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTa > 2:2212809/1‑130 (MQ=255) ttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTc < 2:2035852/150‑1 (MQ=255) ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCAtt > 2:1367507/1‑150 (MQ=255) ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCACAAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCAtt > 1:26472/1‑150 (MQ=255) ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCAGGCAGGCACGCTC‑GTATAGGAGTATCGCTCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCAtt > 2:1892395/1‑150 (MQ=38) ttCTGAATGTGTGTTGTCAGTGCCCGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGCGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTCCTGTGCGCACAGCCCTACTGTTCAtt < 2:1982111/150‑1 (MQ=255) tGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTctg > 2:547300/1‑150 (MQ=255) tGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTctg > 2:172692/1‑150 (MQ=255) aaTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACC‑AGATCGGCAGAGTGTGCGCACAGCCCTACTGTTCATTctgct > 2:1398804/1‑150 (MQ=37) aTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGc > 1:2171420/1‑131 (MQ=255) gtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGC‑AAccc < 2:93190/112‑1 (MQ=255) gtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTctgc < 1:981440/144‑1 (MQ=255) tgttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc > 2:93427/1‑77 (MQ=255) tgttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc < 1:93427/77‑1 (MQ=255) ttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTCTCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCa > 1:784097/1‑150 (MQ=255) gtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgc < 2:356283/76‑1 (MQ=25) gtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgc > 1:356283/1‑76 (MQ=255) tCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc > 2:2249435/1‑72 (MQ=255) tCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc < 1:2249435/72‑1 (MQ=255) cAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGc < 2:1547178/150‑1 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGtt > 2:1287249/1‑127 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGtt < 1:1287249/127‑1 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 1:957433/150‑1 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCg < 1:1444845/84‑1 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCg > 2:1444845/1‑84 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCGTACTGTTCATTCTGCTTCTATTCACCGCCCGCaa > 2:1108488/1‑150 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGACAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCaa < 1:2090705/150‑1 (MQ=255) ggCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAc < 1:1294114/150‑1 (MQ=255) ggCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAc > 1:2021199/1‑150 (MQ=255) ggCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAc > 2:767758/1‑150 (MQ=255) gCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCgg < 2:1884523/83‑1 (MQ=255) GCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGcccc < 2:1782506‑M1/150‑1 (MQ=255) GGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAcc < 1:1702444‑M1/150‑1 (MQ=255) GTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAccc < 2:388224‑M1/150‑1 (MQ=255) GTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAccc < 2:2142686‑M1/150‑1 (MQ=255) AAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTg > 2:1918710‑M1/1‑150 (MQ=255) AACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGAAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCGACCCACCGCCTGCAACCAAGGCCccaccccag < 2:1168388‑M1/150‑4 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AAccc < 2:201131‑M1/79‑1 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AAccc > 1:201131‑M1/1‑79 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCAtt < 2:1684095‑M1/107‑1 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCAtt > 1:1684095‑M1/1‑107 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCaa < 2:330445‑M1/130‑1 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCaa > 1:330445‑M1/1‑130 (MQ=255) C‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTg > 2:2144270‑M1/1‑150 (MQ=255) CTACATGATTATCGCTGCCCCTGTAGGAGCCGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg > 1:1108488‑M1/1‑150 (MQ=255) TACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg < 2:1916913‑M1/150‑1 (MQ=255) ACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt > 2:784097‑M1/1‑150 (MQ=255) ACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt < 1:1895315‑M1/150‑1 (MQ=255) CAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg > 2:1384280‑M1/1‑150 (MQ=255) CAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg > 1:1367507‑M1/1‑150 (MQ=255) CAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg < 1:1384280‑M1/150‑1 (MQ=255) AGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtgg < 1:1427820‑M1/150‑1 (MQ=255) AGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCCGggtgg > 2:705682‑M1/1‑150 (MQ=255) GGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTTCAACCAAGGCCCCACCCAGGCGCTCCAgggtggg > 1:936035‑M1/1‑149 (MQ=255) aTTAACGCGGCCCCTGTAGGGGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTcc < 1:2118423/150‑1 (MQ=255) tATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtggggcct < 1:1782506/150‑6 (MQ=38) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 1:1389560/1‑150 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGAGGTCCGAcc > 1:715643/1‑150 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCa > 1:564226/1‑101 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCTTGGGTGGTCCGACCAt < 1:1287951/150‑1 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCt > 2:4421/1‑135 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCt < 1:4421/135‑1 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCAt < 1:1032554/150‑1 (MQ=255) cTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAg < 2:2050925/115‑1 (MQ=255) tGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATgg < 2:1427820/150‑1 (MQ=255) cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCATACTGAGCGCACAGCCGTGCTGTTCCTTCTGCTGCTACTGCCCGCCCGCAAACAAGGTCCGACCCCGGGGCGCCCGGGTGGCCCGACCGTgggaa > 2:330837/1‑148 (MQ=25) | TTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCA > NC_002947/2456781‑2457063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |