| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,456,931 | T→A | 5.1% | intergenic (+139/‑42) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,456,931 | 0 | T | A | 5.1% | 351.9 / 5.7 | 117 | intergenic (+139/‑42) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (55/56); new base A (3/3); total (58/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
CCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGG > NC_002947/2456784‑2457061 | ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAc < 1:1262580/150‑1 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTAAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc > 2:2215441/1‑150 (MQ=255) cGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcg > 1:232539/1‑150 (MQ=255) gCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcgc > 2:957433/1‑150 (MQ=255) tGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGa > 2:1356181/1‑150 (MQ=255) tGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCACGGGTAACCCCGATC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCTGCGa > 2:798943/1‑150 (MQ=255) ttCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTCCCCCTGTACGAGCTGGTTTACCCGCGAaga < 2:636592/150‑1 (MQ=255) tCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCGTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAagag < 2:120214/150‑1 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAaga > 2:975037/1‑147 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGc < 2:1332885/150‑1 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGc < 2:232539/150‑1 (MQ=255) ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCTGGTTTACCCGCGAAGAGGCCa < 2:1454310/150‑1 (MQ=255) ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc < 1:139295/142‑3 (MQ=255) ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc > 2:139295/1‑140 (MQ=255) aGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCAc < 1:498918/150‑1 (MQ=255) gCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACGCGCGAAGAGGCCAGCACCgg > 1:787546/1‑150 (MQ=255) cAATGAAAAAACGGGAACCTTCGGTTTCCCT‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGc < 1:1877426/150‑1 (MQ=255) tGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAAc < 1:624934/150‑1 (MQ=255) aaaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga < 2:740480/150‑1 (MQ=255) gggAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAcc > 1:28910/1‑150 (MQ=255) gggAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAcc > 2:1294114/1‑150 (MQ=255) ggAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAccc > 1:1547178/1‑150 (MQ=255) aaCCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCACCAC‑GGATTATCGCTGCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa < 1:1975068/150‑1 (MQ=39) aaCCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa < 1:379120/150‑1 (MQ=255) ccTTCGGGTTCCCG‑TTTTTTTTTGTTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAACAGGCCAGCACCGGCAACCGAGAAACCCTACt < 2:1482014/150‑1 (MQ=255) cTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACtg > 1:570831/1‑150 (MQ=255) cTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCAGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc < 2:338879/116‑3 (MQ=38) cTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCAGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc > 1:338879/1‑114 (MQ=38) ttCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACtgt < 1:2129249/150‑1 (MQ=255) ttCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACtgt > 1:1918710/1‑150 (MQ=255) gggTTCCCG‑TTTTTTTTTATTCTTAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTgcg > 2:2090705/1‑150 (MQ=255) ccG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGc < 2:570831/150‑1 (MQ=255) tttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa < 1:2212809/130‑1 (MQ=255) tttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa > 2:2212809/1‑130 (MQ=255) ttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTc < 2:2035852/150‑1 (MQ=255) aTTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCATGCTGTTCAt < 2:1800122/150‑1 (MQ=255) ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCAtt > 2:1367507/1‑150 (MQ=255) ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCACAAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCAtt > 1:26472/1‑150 (MQ=255) ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCAGGCAGGCACGCTC‑GTATAGGAGTATCGCTCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCAtt > 2:1892395/1‑150 (MQ=38) tGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctg > 2:547300/1‑150 (MQ=255) aTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGc < 2:2171420/131‑1 (MQ=255) aTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGc > 1:2171420/1‑131 (MQ=255) tgtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTa > 2:1032554/1‑150 (MQ=255) gtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGCAAccc < 2:93190/112‑1 (MQ=255) gtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAccc > 1:93190/1‑112 (MQ=255) gtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctgc < 1:981440/144‑1 (MQ=255) tgttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc > 2:93427/1‑77 (MQ=255) tgttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc < 1:93427/77‑1 (MQ=255) ttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTCTCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCa > 1:784097/1‑150 (MQ=255) gtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgc < 2:356283/76‑1 (MQ=25) gtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgc > 1:356283/1‑76 (MQ=255) tCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc < 1:2249435/72‑1 (MQ=255) tCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc > 2:2249435/1‑72 (MQ=255) cAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGc < 2:1547178/150‑1 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGtt < 1:1287249/127‑1 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 1:957433/150‑1 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCg > 2:1444845/1‑84 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCg < 1:1444845/84‑1 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCGTACTGTTCATTCTGCTTCTATTCACCGCCCGCaa > 2:1108488/1‑150 (MQ=255) cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGACAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCaa < 1:2090705/150‑1 (MQ=255) ggCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAc < 1:1294114/150‑1 (MQ=255) ggCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAc > 1:2021199/1‑150 (MQ=255) ggCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAc > 2:767758/1‑150 (MQ=255) gCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCgg > 1:1884523/1‑83 (MQ=255) gCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCgg < 2:1884523/83‑1 (MQ=255) GCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGcccc < 2:1782506‑M1/150‑1 (MQ=255) GGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAcc < 1:1702444‑M1/150‑1 (MQ=255) GTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAccc < 2:388224‑M1/150‑1 (MQ=255) GTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCAccc < 2:2142686‑M1/150‑1 (MQ=255) AAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTg > 2:1918710‑M1/1‑150 (MQ=255) AACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGAAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCGACCCACCGCCTGCAACCAAGGCCccaccccag < 2:1168388‑M1/150‑4 (MQ=255) ACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa > 2:2021199‑M1/1‑150 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAccc < 2:201131‑M1/79‑1 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAccc > 1:201131‑M1/1‑79 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCAtt > 1:1684095‑M1/1‑107 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCAtt < 2:1684095‑M1/107‑1 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCaa > 1:330445‑M1/1‑130 (MQ=255) CCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCaa < 2:330445‑M1/130‑1 (MQ=255) CTACATGATTATCGCTGCCCCTGTAGGAGCCGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg > 1:1108488‑M1/1‑150 (MQ=255) TACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg < 2:1916913‑M1/150‑1 (MQ=255) ACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggt > 2:784097‑M1/1‑150 (MQ=255) CAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg > 2:1384280‑M1/1‑150 (MQ=255) CAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg < 1:1384280‑M1/150‑1 (MQ=255) CAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtg > 1:1367507‑M1/1‑150 (MQ=255) AGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtgg < 1:1427820‑M1/150‑1 (MQ=255) AGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCCGggtgg > 2:705682‑M1/1‑150 (MQ=255) GGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTTCAACCAAGGCCCCACCCAGGCGCTCCAgggtggg > 1:936035‑M1/1‑149 (MQ=255) GATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTc > 1:2215441‑M1/1‑150 (MQ=255) tATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtggggcct < 1:1782506/150‑6 (MQ=38) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTg > 2:33314/1‑129 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTg < 1:33314/129‑1 (MQ=255) tCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAcc > 1:1389560/1‑150 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCa > 1:564226/1‑101 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCTTGGGTGGTCCGACCAt < 1:1287951/150‑1 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCt > 2:4421/1‑135 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCt < 1:4421/135‑1 (MQ=255) gCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCAt < 1:1032554/150‑1 (MQ=255) cTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAg > 1:2050925/1‑115 (MQ=255) cTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAg < 2:2050925/115‑1 (MQ=255) tGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATgg < 2:1427820/150‑1 (MQ=255) | CCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGG > NC_002947/2456784‑2457061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |