| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 213,085 | C→T | 6.7% | A6197A (GCC→GCT) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 213,085 | 0 | C | T | 6.7% | 342.5 / 11.4 | 119 | A6197A (GCC→GCT) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base C (63/48); new base T (5/3); total (68/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.83e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
GTCACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCGG > NC_002947/212939‑213233 | gTCACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCAcc > 1:1014191/1‑150 (MQ=34)gTCACCGAAGGCGGCGAGATTACCTACACCACCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCATGCCGGCCAACGGCACCGTGGGCACTGCCAcc > 2:894687/1‑150 (MQ=255) ccGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCa > 2:1295506/1‑150 (MQ=34) tACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGt < 2:1514561/150‑1 (MQ=255) ccTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGccc > 2:1704623/1‑138 (MQ=38) ccTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGccc < 1:1704623/138‑1 (MQ=38) ccTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCt > 2:1091748/1‑150 (MQ=40) cTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTa > 2:1952168/1‑150 (MQ=38) acCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTc > 1:1685151/1‑150 (MQ=39) acCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTc > 2:220021/1‑150 (MQ=38) cATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTAc > 1:786149/1‑145 (MQ=39) cATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTAc < 2:786149/145‑1 (MQ=38) cACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTAc < 1:220021/150‑1 (MQ=39) gCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCaa < 2:1079152/150‑1 (MQ=38) gCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCaa > 2:1283082/1‑150 (MQ=38) caacaaAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGAccc > 1:1205957/1‑150 (MQ=37) caacaaAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGAccc > 1:1847622/1‑150 (MQ=38) acaaAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTg > 2:2094930/1‑150 (MQ=38) acaaAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTg > 1:587036/1‑150 (MQ=39) aaaGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGt < 2:1540695/131‑1 (MQ=40) aaGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCg > 2:969058/1‑150 (MQ=39) aCGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCg > 1:1662009/1‑129 (MQ=40) aCGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCg < 2:1662009/129‑1 (MQ=40) aCGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGa < 2:2310277/150‑1 (MQ=255) cGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGAt < 1:2094930/150‑1 (MQ=40) cGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGAt < 1:643272/150‑1 (MQ=255) gCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGt > 2:2054368/1‑150 (MQ=39) tGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGa > 2:1332635/1‑150 (MQ=40) ccGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATc < 1:1952168/150‑1 (MQ=39) cGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCa < 1:1403249/90‑1 (MQ=32) cGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCa > 2:1403249/1‑90 (MQ=32) cGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTc < 2:1228819/113‑1 (MQ=37) cGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTc > 1:1228819/1‑113 (MQ=37) cagtacccacggtgccattagccggcacggtgatgacggttttgccgtcgctcagggtgaaggtcaatgcactGTGGGTACTGCCACTGTCACTGCCCCGGATAACGTCTACGTCGGCAGCAACGACCCTGTCGTGATGTCGAtcgctac > 2:351585‑M2/74‑147 (MQ=255) caacCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGt < 1:1783841/150‑1 (MQ=38) aacaacAGTGCATTGACGTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGCACAATGTCTAAGACGGTGCCAGCATCCCCCGCGTGATGTCGATCGCAACCGtt > 2:1231247/1‑150 (MQ=11) aacCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGtt > 1:1421111/1‑150 (MQ=37) ccacggtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGa > 2:1688395‑M2/68‑150 (MQ=255) cacggtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGaa > 2:577741‑M2/67‑150 (MQ=255) cacggtgccgttggccggcacggtgatgacggttttgccgtcactcagcgtgaaggtcaatgcactGTGGGCACTGCTACCGTCACTGTCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGttgga > 1:790062‑M2/67‑148 (MQ=255) cacggtgccattagccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGaa > 1:630453‑M2/67‑150 (MQ=255) ggtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactGTGGGCACTGCCACCGTCACTGCCCCGGACAATGt < 1:2250939‑M2/35‑1 (MQ=255) ggtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactGTGGGCACTGCCACCGTCACTGCCCCGGACAATGt > 2:2250939‑M2/64‑98 (MQ=255) gtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAaccgttggcggcg > 2:1778032‑M2/63‑144 (MQ=255) gtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGAt < 2:1063915‑M2/71‑1 (MQ=255) gtgccgttggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGAt > 1:1063915‑M2/63‑133 (MQ=255) gTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGtt > 2:1953549/1‑143 (MQ=38) tGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGgcgc < 2:1518019/150‑1 (MQ=255) tGCATTGACCTTCACGCTCAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATc < 1:925208/133‑1 (MQ=38) gttggccggcacggtgatgacggttttgccgtcactcagcgtgaaggtcaatggcaccGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCGGa > 2:2389245‑M2/59‑150 (MQ=255) aTTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGa < 1:2006540/141‑1 (MQ=39) aTTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGa > 2:974454/1‑150 (MQ=255) ggccggcacggtgatgacggttttgccgtcgctcagcgtgaaggtcaatgcactGTGGGTACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTGAAGGTGCGGACGtt < 1:1688395‑M2/96‑1 (MQ=255) ccTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCTGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTg < 1:868667/150‑1 (MQ=255) cTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATc > 2:533964/1‑124 (MQ=40) cTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATc < 1:533964/124‑1 (MQ=40) cTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTgg > 2:2048076/1‑150 (MQ=255) cggcacggtgatgacggttttgccgtcactcagcgtgaaggtcaatgcactGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCGGACGTcggt > 1:2336012‑M2/52‑149 (MQ=255) cACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCaa < 1:1091748/150‑1 (MQ=255) cACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCaa > 1:2359808/1‑150 (MQ=255) gaggcaCGGCAAAACCGTCATCACCGTTCCGGCCAACGGCTCCGTGGGCACTGTCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACACTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGa < 1:2174895/145‑1 (MQ=14) aGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGGGGTGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAg < 1:1231247/150‑1 (MQ=255) atgacggttttgccgtcactcagcgtgaaggtcaatgcactGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGa > 1:1363056‑M2/42‑105 (MQ=255) atgacggttttgccgtcactcagcgtgaaggtcaatgcactGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGa < 2:1363056‑M2/64‑1 (MQ=255) ggCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTg > 1:1414091/1‑150 (MQ=255) ggCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTg > 1:2336014/1‑150 (MQ=255) aaaaCCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGtt > 2:953299/1‑129 (MQ=255) aaaaCCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGtt < 1:953299/129‑1 (MQ=255) aaaaCCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACg > 2:2314275/1‑150 (MQ=255) ccGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTc < 2:1994500/134‑1 (MQ=255) ccGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTc > 1:1994500/1‑134 (MQ=255) catcaCCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACaa < 2:54329/150‑1 (MQ=255) atcaCCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTCGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAg > 1:940488/1‑150 (MQ=255) tcaCCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTg > 2:2409743/1‑120 (MQ=255) tcaCCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTg < 1:2409743/120‑1 (MQ=255) caCCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGAc > 2:673689/1‑150 (MQ=255) aCCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCGTGTTCCAAGGACGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACg > 1:1353688/1‑150 (MQ=14) ccGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACCAAAGGGTCGTGATGTCGATCGCAACAGTTGGATGCTTATAGTGAGGTTAGTTCGAGCAACTGACGCTGGACAAGACGc > 1:2341114/1‑150 (MQ=11) gTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCg < 1:2048076/150‑1 (MQ=255) ccGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCg > 1:1304409/1‑58 (MQ=255) ccGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCg < 2:1304409/58‑1 (MQ=255) ccGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTc < 1:969058/150‑1 (MQ=255) aaggtcaacgcactGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCa < 1:577741‑M2/136‑1 (MQ=255) cAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGa < 1:1093554/63‑1 (MQ=255) cAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGa > 2:1093554/1‑63 (MQ=255) cAACGGCACCATGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCAc > 2:2095132/1‑150 (MQ=255) gCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCgg < 2:965193/150‑1 (MQ=255) ccGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTGa < 1:1283082/150‑1 (MQ=255) TGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGATGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCg > 1:2242361‑M2/1‑150 (MQ=255) GGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGAc < 2:1384873‑M2/150‑1 (MQ=255) cACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACcgacga > 1:2114377/1‑150 (MQ=255) tGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTg > 1:806008/1‑74 (MQ=255) tGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTg < 2:806008/74‑1 (MQ=255) tGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTAACAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCTCGTCGGTCACCGACGTGct < 1:1332635/150‑2 (MQ=17) gCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCg < 2:2359808/150‑1 (MQ=255) ccACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAGGACGCCGGTCAGCACGTCGGTGACCGACGAGCCgg < 2:587036/150‑1 (MQ=255) ccACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGACGGTCAGCACGTCGGTGACCGACGAGCCgg < 1:444302/150‑1 (MQ=255) cACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGcgcg > 1:1396092/1‑79 (MQ=255) cACCGTCACTGCCCCGGACAATGTCTACGTCCGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGc > 2:1876217/1‑127 (MQ=255) cACCGTCACTGCCCCGGACAATGTCTACGTCCGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGc < 1:1876217/127‑1 (MQ=255) | GTCACCGAAGGCGGCGAGATTACCTACACCATCACGCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCCAACGGCACCGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGAAGGCGCGGACGTTGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTGACCGACGAGCCGG > NC_002947/212939‑213233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |