| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,459,124 | C→T | 6.4% | L317L (CTG→TTG) | sthA → | pyridine nucleotide transhydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,459,124 | 0 | C | T | 6.4% | 276.4 / 6.8 | 94 | L317L (CTG→TTG) | sthA | pyridine nucleotide transhydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (46/42); new base T (4/2); total (50/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.83e-01 | |||||||||||
GCAACGGCCGTACCGGCAACACTGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAGGAGCTGACCCAG > NC_002947/2458975‑2459273 | gCAACGGCCGTACCGGCAACACTGAAAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGcc > 2:2121572/1‑150 (MQ=255) aaCGGCCGTACCGGCAACACTGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTg < 1:595799/150‑1 (MQ=255) aaCGGCCGTACCGGCAACACTGACAAGCTGGGCCGGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTg < 1:621002/150‑1 (MQ=255) cGGCCGTACCGGCAACACTGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACAGTACGACCGTGCCGAACAACAAGGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGc > 2:572641/1‑150 (MQ=255) ccGTACCGGCAACACTGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAg > 2:812554/1‑150 (MQ=255) gTACCGGCAACACTGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGtg > 1:278499/1‑150 (MQ=255) gTACCGGCAACACTGACAAGCGGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAAATCGAGGTCGACGAGGCCTACCGTACCAGCGTGGCGAACATCTACGGTGCACGCGACGTGATCGGCTTGCCAAGCCTCGCCatcg > 2:72244/1‑147 (MQ=255) ctcGGCAACACTGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGANCNTCTACGNTGCCGGCGACGTNATCGGCTGGCCAGGCTTGGCCAgcnga < 1:1515776/148‑5 (MQ=255) cGGCAACACTGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGtgctgc > 2:1764089/1‑150 (MQ=255) cacTGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGa < 1:1144929/150‑1 (MQ=255) cacTGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGa > 1:1464989/1‑150 (MQ=255) tGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCa > 2:209925/1‑150 (MQ=255) tGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCa > 2:867816/1‑150 (MQ=255) tGAAAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCa < 1:2121572/150‑1 (MQ=255) cAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAggg < 1:812554/150‑1 (MQ=255) cAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAggg < 1:458921/150‑1 (MQ=255) cTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCgg < 2:1464989/150‑1 (MQ=255) ccTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGc > 2:168494/1‑150 (MQ=255) ccTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGc > 1:733830/1‑150 (MQ=255) cTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGcc > 2:779826/1‑150 (MQ=255) ggAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGc < 2:733830/150‑1 (MQ=255) gAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCCTGCCGAACTCCTACGGTGCCTTCGACTTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCt < 1:2098409/150‑1 (MQ=255) aaaaCATCGGCATCAAGGTGAACAGCCATGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGAc > 2:629657/1‑131 (MQ=255) aaaaCATCGGCATCAAGGTGAACAGCCATGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGAc < 1:629657/131‑1 (MQ=255) aTCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGgcagc > 1:1952965/1‑150 (MQ=255) tCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGgcagca < 1:168494/150‑1 (MQ=255) tCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGgcagca > 1:1486295/1‑150 (MQ=255) ggCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCAtt < 1:209925/150‑1 (MQ=255) cATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGt < 2:1486295/150‑1 (MQ=255) aTCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTc < 1:779826/150‑1 (MQ=255) aTCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTc < 1:867816/150‑1 (MQ=255) cAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGa < 1:72244/150‑1 (MQ=255) aaGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGAt > 2:1486789/1‑150 (MQ=255) gAACAGCCGTGGGCAGATCGAGGGCGACGAGGCCTGCCGTACCACCGTGCCGAACATCTACGGTGCCGGGGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACgg < 2:403890/150‑1 (MQ=255) gCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCt > 1:859314/1‑150 (MQ=255) ccGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTgg < 2:1110139/89‑1 (MQ=255) ccGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTgg > 1:1110139/1‑89 (MQ=255) ccGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGc < 1:2344515/90‑1 (MQ=255) ccGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGc > 2:2344515/1‑90 (MQ=255) ccGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTACCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTg > 2:887942/1‑150 (MQ=255) tGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGgcg > 1:2365300/1‑150 (MQ=255) cAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCTCTGGCAGCATTGTCGATAACGGCATCTGGCGCTTc > 2:540198/1‑150 (MQ=255) cAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCt < 2:1299693/117‑1 (MQ=255) cAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCt > 1:1299693/1‑117 (MQ=255) cAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTc < 2:2136405/150‑1 (MQ=255) aTCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTc > 2:118096/1‑150 (MQ=255) ccTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACgg < 1:1486789/150‑1 (MQ=255) cTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCCGGCGCTTCGTCAACGACGTGCCGACggg > 1:1437100/1‑150 (MQ=255) tACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCCATCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTTGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGt > 2:660772/1‑150 (MQ=255) tACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGgcag > 2:392000/1‑101 (MQ=255) tACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGgcag < 1:392000/101‑1 (MQ=255) tACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAg > 1:1813794/1‑119 (MQ=255) tACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAg < 2:1813794/119‑1 (MQ=255) aCCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTa > 2:1522021/1‑150 (MQ=255) ccGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTAt < 1:1799042/150‑1 (MQ=255) tACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTa < 1:1522021/150‑1 (MQ=255) ccaccGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTaca > 2:1255668/1‑150 (MQ=255) caccGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGTTTCGTCAACAACGCGCCGACGGGTATCTacac < 2:344194/150‑1 (MQ=255) caccGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTacac < 2:278499/150‑1 (MQ=255) caccGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTacac < 1:1255668/150‑1 (MQ=255) gTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCAtt < 2:1592428/150‑1 (MQ=255) gTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCAtt > 1:51082/1‑150 (MQ=255) gCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGCGTATCTGTACAATTcc > 2:516430/1‑150 (MQ=255) gCCGAACATCTACAGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCATCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTcc > 2:1955498/1‑150 (MQ=255) cGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCg < 2:859314/150‑1 (MQ=255) gAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCga < 2:1437100/150‑1 (MQ=255) gAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCga > 1:1343551/1‑150 (MQ=255) aCATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCgaga < 1:1123059/150‑1 (MQ=255) cATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGAt > 1:516131/1‑150 (MQ=255) caatACGATGCCGGCGCGGTGATCTGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATc > 2:2331917/4‑150 (MQ=255) cTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAg > 2:2315511/1‑150 (MQ=255) ccGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCg > 2:230862/1‑150 (MQ=255) gCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATCCCGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCa > 1:1852361/1‑150 (MQ=255) cGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCaa < 2:2171659/150‑1 (MQ=255) cGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGaa < 2:1952965/150‑1 (MQ=255) tGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAgg > 1:1451046/1‑42 (MQ=255) tGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAgg < 2:1451046/42‑1 (MQ=255) ggCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACgg > 1:268676/1‑103 (MQ=255) ggCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACgg < 2:268676/103‑1 (MQ=255) ggCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAg < 1:643654/150‑1 (MQ=255) cacTGGCCAGGCTTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGACCGGCAAGAACCAGCac > 2:425404/3‑149 (MQ=255) acTGGCCAGGCTTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGa < 2:1668572/140‑1 (MQ=255) acTGGCCAGGCTTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGa > 1:1668572/2‑141 (MQ=255) acTGGCCAGGCTTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGGATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAgg > 2:272247/2‑150 (MQ=255) gtGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAGGa < 2:2254284/149‑1 (MQ=255) cTGGCCAGGCTTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAGGa > 2:199738/1‑150 (MQ=255) cTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAGGa < 1:1764089/150‑1 (MQ=255) tGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAGGAg < 1:887942/150‑1 (MQ=255) gCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAATAGGGAGCAGGAgtt > 2:1267993/1‑148 (MQ=255) cAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAGGAGCTGa > 1:1821172/1‑150 (MQ=255) cAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACAACATTCCTAATGTCAGCTCGATCGGCAAGAACGAGCAGGAGCTGa > 2:1770391/1‑150 (MQ=255) aatccTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAGGAg < 1:646956/142‑1 (MQ=255) aaGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTaaat > 1:654341/1‑81 (MQ=255) aaGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAac < 2:654341/82‑1 (MQ=255) aaGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAGGAg > 2:646956/1‑145 (MQ=255) aaGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAGGAGCTGAc > 2:220461/1‑150 (MQ=255) cTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAac < 2:917038/78‑1 (MQ=255) cTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAac > 1:917038/1‑78 (MQ=255) cTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCACAGGCGTGCCGACGGGTATCTACACCATTCCCGCGATCAGCTCGATCGGCAAGAACGAGCAGGAGCTGACCCAg > 1:1621738/1‑150 (MQ=255) | GCAACGGCCGTACCGGCAACACTGACAAGCTGGGCCTGGAAAACATCGGCATCAAGGTGAACAGCCGTGGCCAGATCGAGGTCGACGAGGCCTACCGTACCACCGTGCCGAACATCTACGGTGCCGGCGACGTGATCGGCTGGCCAAGCCTGGCCAGTGCTGCCCATGACCAGGGCCGGTCGGCCGCTGGCAGCATTGTCGATAACGGCAGCTGGCGCTTCGTCAACGACGTGCCGACGGGTATCTACACCATTCCCGAGATCAGCTCGATCGGCAAGAACGAGCAGGAGCTGACCCAG > NC_002947/2458975‑2459273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |