| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,498,030 | T→A | 7.6% | intergenic (+88/‑113) | PP_2192 → / → PP_2193 | ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein/ferric siderophore receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,498,030 | 0 | T | A | 7.6% | 247.9 / 7.0 | 78 | intergenic (+88/‑113) | PP_2192/PP_2193 | ECF family RNA polymerase sigma‑70 factor/transmembrane sensor protein/ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base T (41/31); new base A (2/4); total (43/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GTTGGAGCAGCGGTATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGC > NC_002947/2497882‑2498173 | gTTGGAGCAGCGGTATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCtt < 2:367139/150‑1 (MQ=255) agcagcGGTATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCcg > 2:556772/1‑150 (MQ=255) ggTATGGCCTGAAGGTGACTTACCTGCCGTGGTTGCTGGCCGTGCATTGCTCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAaga < 1:737452/150‑1 (MQ=255) ggTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGaaa > 2:69783/1‑150 (MQ=255) ggTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGaaa > 2:777770/1‑150 (MQ=255) gTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAt < 2:252315/150‑1 (MQ=255) cTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑aaaa < 2:1471516/150‑1 (MQ=255) ttACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑aaaaa < 1:2379176/150‑1 (MQ=255) ttACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCAAGCCcgctcct < 1:795756/130‑5 (MQ=255) ttACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCAAGCCcgctcct > 2:795756/1‑126 (MQ=255) ttACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCAAGCCcgctc > 2:2188950/1‑126 (MQ=255) ttACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCAAGCCcgctc < 1:2188950/128‑3 (MQ=255) cTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATAtt < 1:35979/150‑1 (MQ=255) tGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATAttt > 1:772206/1‑150 (MQ=255) ttGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTg < 1:556772/150‑1 (MQ=255) tGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTTTTTCGGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTgg < 1:1932746/150‑1 (MQ=255) gCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCa > 1:497518/1‑150 (MQ=255) gtgCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCaa < 2:1149697/150‑1 (MQ=255) aTTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTc > 1:1679882/1‑150 (MQ=255) tGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCt < 1:252562/150‑1 (MQ=255) gATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTg < 1:69783/150‑1 (MQ=255) gATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTg > 2:1063722/1‑150 (MQ=255) cAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCaa < 2:497518/150‑1 (MQ=255) cAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCaa < 1:230694/150‑1 (MQ=255) aGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAg > 2:1918693/1‑150 (MQ=255) cTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCa > 1:1877536/1‑150 (MQ=255) cTGTTCCGGCCTCTTAGCAGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCa > 2:2020754/1‑150 (MQ=255) cGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGAtcgt > 2:1564012/1‑150 (MQ=255) ggCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCGTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGAtcgta > 2:1750282/1‑149 (MQ=255) gCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCAt > 2:1822615/1‑116 (MQ=255) gCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCAt < 1:1822615/116‑1 (MQ=255) gCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGAtcgtcg > 2:2291753/1‑150 (MQ=255) tctTAGCGGCAAGCCCGTTCCTGCACAGATCACACAGCCTCCATACAGCCCTGGTCGATGTAGGAGCGGGCTTGGCCTCGAAGAGGCCGGACATAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAg < 1:1365443/150‑1 (MQ=255) ttAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTg > 1:2322178/1‑150 (MQ=255) ttAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTg > 1:278645/1‑150 (MQ=255) gCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTgaga < 1:1564012/150‑1 (MQ=255) ggCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCaa > 1:777532/1‑118 (MQ=255) ggCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCaa < 2:777532/118‑1 (MQ=255) aaGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGAt > 1:416036/1‑150 (MQ=255) gCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTgg > 1:2266972/1‑105 (MQ=255) gCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTgg < 2:2266972/105‑1 (MQ=255) cccGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAg < 1:2020754/150‑1 (MQ=255) cccGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAg > 1:1018831/1‑150 (MQ=255) cccGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAg > 2:1247499/1‑150 (MQ=255) ccGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGc > 1:2379361/1‑150 (MQ=255) ccGTTCCTGCACAGATCGCACAAACTTCAGGCGGGCGCAGTCGTTGTAGGCGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAAATCGTCGTAGCGAGACTGATCAGc > 2:984336/1‑150 (MQ=255) tCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAAcc > 1:6252/1‑150 (MQ=255) cTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGCAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATAAGCAACCCa > 2:542882/1‑150 (MQ=255) cTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCa > 1:180459/1‑150 (MQ=255) cTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCa > 2:1743650/1‑150 (MQ=255) tGCACAGATCGCACAATCTTCAGGCGGGCGCAGACGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCAt > 1:2348793/1‑150 (MQ=255) cacaGATCGCCCATTCTCCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCATGGCAGGGCAGACG‑AGAACTCTTATGAAAAATATTTTCGAGGTTCCACTGCAAGTTCCTGCAAGTGTGATCGTCGTAGGGAGACTGATCAGCAACCCATtc < 1:1750282/150‑1 (MQ=255) acaGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATtct > 1:1776713/1‑150 (MQ=255) cGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGGGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTa < 2:1689381/150‑1 (MQ=255) gCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTgaga > 2:1300309/1‑124 (MQ=255) gCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTgaga < 1:1300309/124‑1 (MQ=255) gCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTAc > 2:1776162/1‑150 (MQ=255) cacaATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGccc < 1:948388/45‑1 (MQ=255) cacaATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGccc > 2:948388/1‑45 (MQ=255) acaATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGa < 1:1063722/150‑1 (MQ=255) aaTCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCaa > 1:173300/1‑90 (MQ=255) aaTCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCaa < 2:173300/90‑1 (MQ=255) aTCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACtt < 2:1877536/150‑1 (MQ=255) cTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCTAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCGTGTTGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGt < 1:770898/150‑1 (MQ=255) ttCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTc > 2:226739/1‑150 (MQ=255) tCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCa < 2:2348793/150‑1 (MQ=255) cAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAg < 1:777770/150‑1 (MQ=255) gcgggcgCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGaa > 2:1884532/1‑150 (MQ=255) gcAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCAt > 1:472158/1‑150 (MQ=255) gTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGc > 1:81798/1‑150 (MQ=255) gTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACACAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCTATTCTCATTTACGACTTGTCTGGAAGCCCATTCGTGc > 1:1826289/1‑150 (MQ=255) ttGTGGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGcc > 2:1026970/1‑150 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGc > 1:651107/1‑149 (MQ=255) ttGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGc < 2:651107/149‑1 (MQ=255) tAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGAtcgtc < 2:2354193/86‑1 (MQ=255) tAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGAtcgtc > 1:2354193/1‑86 (MQ=255) tcgCGGGCAAGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTa < 1:35299/115‑1 (MQ=255) gAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGAt < 2:2379361/150‑1 (MQ=255) gCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGc < 1:1884532/150‑1 (MQ=255) | GTTGGAGCAGCGGTATGGCCTGAAGGTGACTTACCTGCCGTGGTTGGCCGTGGTGCATTGATCAGCCTGTTCCGGCCTCTTAGCGGCAAGCCCGTTCCTGCACAGATCGCACAATCTTCAGGCGGGCGCAGTCGTTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGACAGAAAT‑AAAAATATTTTCCATTTGGCACTGCAAGTTCCTGCAAGCCAGATCGTCGTAGTGAGACTGATCAGCAACCCATTCTCATTTACGACTTGTCAGGAAGCTCATTCGTGCCTCTGATGC > NC_002947/2497882‑2498173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |