| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,546,866 | T→C | 9.2% | intergenic (+22/+18) | PP_2238 → / ← PP_5504 | metallopeptidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,546,866 | 0 | T | C | 9.2% | 250.4 / 11.5 | 89 | intergenic (+22/+18) | PP_2238/PP_5504 | metallopeptidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (34/46); new base C (4/4); total (39/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.97e-01 | |||||||||||
CCGAGTTGCTGACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGTGCTGCAGGCG > NC_002947/2546717‑2547013 | ccGAGTTGCTGACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGttt > 2:2048314/1‑150 (MQ=255) gAGTTGCTGACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGc < 1:1514250/150‑1 (MQ=255) gAGTTGCTGACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGc > 2:1867475/1‑150 (MQ=255) aGTTGCTGACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑CGCGCCCCTGCTCCAAGGGGATGCGCTACCCTGGCTGGGGATCCGTACTGCACCCCTGTAACGCAGCCGAAAGTGGGCAGTTTGCg < 2:1355203/150‑1 (MQ=255) cTGACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTg > 1:2047727/1‑150 (MQ=255) gACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGcc < 1:2179675/150‑1 (MQ=255) aCCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGccc > 1:2168841/1‑150 (MQ=255) ccAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCt < 2:805791/150‑1 (MQ=255) ccAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCt < 1:2048314/150‑1 (MQ=255) cAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGT‑CTCTACCGTGTCCTTGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCtt < 2:1871033/150‑1 (MQ=255) aaGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCttt < 1:669980/150‑1 (MQ=255) aaGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGCAAACTGCCCttt > 1:1888826/1‑150 (MQ=255) aggaggaggTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCtttt < 1:248197/150‑1 (MQ=255) aggaggaggTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGCAAACTGCCCtttt < 2:1888826/150‑1 (MQ=255) gaggaggTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGCAAACTGCCCtttttc < 1:1867475/150‑3 (MQ=255) ggaggTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTctct > 2:174026/1‑150 (MQ=255) ggTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTAtt > 1:210351/1‑150 (MQ=255) gTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTtc < 1:748801/143‑1 (MQ=255) gTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTtc > 2:748801/1‑143 (MQ=255) ggAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTAc < 2:2388375/150‑1 (MQ=255) ggAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCAACGCTGTAAAGCAGCGGAAAAAGAGCAGTTTGCGAACTGCCCTTTTCTCTATTTAc > 1:1364884/1‑150 (MQ=255) gAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACa < 1:1194964/150‑1 (MQ=255) gAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACa < 1:1558245/150‑1 (MQ=255) gTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAga < 1:1909907/150‑1 (MQ=255) gTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCCTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAga < 2:2100319/150‑1 (MQ=255) cTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgatgat < 1:1626330/150‑1 (MQ=255) cTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgatgat > 1:1847976/1‑150 (MQ=255) ttaacttcTACCACGCCTGCGTACATGAGCGCCT‑GGCGACCTTGCTACAATGGGATGCGCTAGCCTGGCTGGTGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgatgatg < 2:1000027/143‑1 (MQ=255) tGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgatgatg > 1:593158/1‑150 (MQ=255) gAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgatgatga < 2:1847976/150‑1 (MQ=255) aaCGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgatgatgat < 2:210351/150‑1 (MQ=255) aCGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATc > 1:1919175/1‑141 (MQ=255) aCGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATc < 2:1919175/141‑1 (MQ=255) aCGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCgg > 2:1446090/1‑150 (MQ=255) cTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTgg > 1:1590469/1‑150 (MQ=255) tGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGgt > 2:1903646/1‑150 (MQ=255) tGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGgt < 1:1554113/150‑1 (MQ=255) tACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAg < 1:93690/150‑1 (MQ=255) aCATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGc < 1:2210634/150‑1 (MQ=255) aTGAGCGCCT‑GGCGCCCTTGCTCCAAGTGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGgt < 1:2146599/143‑1 (MQ=255) aTGAGCGCCT‑GGCGCCCTTGCTCCAAGTGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGgt > 2:2146599/1‑143 (MQ=255) cT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGTCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAga > 2:1213078/1‑113 (MQ=255) cT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGTCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAga < 1:1213078/113‑1 (MQ=255) cT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTa > 2:1820480/1‑105 (MQ=255) cT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTa < 1:1820480/105‑1 (MQ=255) ggCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGa < 1:1903646/150‑1 (MQ=255) gcgcCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGAt > 1:1881618/1‑150 (MQ=255) gcCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGTATTTACGAACGTCATCGTTGTTAAGCAGCGGAAAAAGGGCCGCCAGCCATTACTCGGTGGCGCTGTTTACAGATGATGATCATGCTCCGGCTGGTGTAGCACGCCGGGTTGATGc > 1:2350911/1‑150 (MQ=255) gcCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGc < 1:845583/150‑1 (MQ=255) gcCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGATGGTGTAGCCCGCCGGGTTGATGc < 2:2021478/150‑1 (MQ=255) cccTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgatgatga < 2:72896/113‑1 (MQ=255) cccTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAgatgatga > 1:72896/1‑113 (MQ=255) ccTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCg > 2:133773/1‑150 (MQ=255) tCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCTGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCACGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACaaa < 1:2296532/150‑1 (MQ=255) tCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATg < 1:1723103/111‑1 (MQ=255) tCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATg > 2:1723103/1‑111 (MQ=255) tCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCgg > 1:1406810/1‑117 (MQ=255) tCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCgg < 2:1406810/117‑1 (MQ=255) tCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACaaa > 2:2296532/1‑150 (MQ=255) cAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATa > 2:855375/1‑150 (MQ=255) cAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATa < 2:2047727/150‑1 (MQ=255) aaGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAg > 1:141227/1‑150 (MQ=255) aGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGt < 1:36639/150‑1 (MQ=255) ggggATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTc < 1:133773/150‑1 (MQ=255) gcgcTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGc < 2:141227/150‑1 (MQ=255) tAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCCGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTGACCGGCctct > 1:973163/1‑150 (MQ=255) tAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCctct > 2:1066155/1‑150 (MQ=255) gCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTc > 1:2141544/1‑150 (MQ=255) ccTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATc < 1:165053/90‑1 (MQ=255) ccTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATc > 2:165053/1‑90 (MQ=255) ccTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGCAAACTGCCCtt > 2:663531/1‑67 (MQ=38) ccTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTCGCAAACTGCCCtt < 1:663531/67‑1 (MQ=38) ctggctggAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCAt > 2:2234714/1‑150 (MQ=255) ggctggAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCg < 1:1066155/150‑1 (MQ=255) gagaTGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATc < 1:2234714/150‑1 (MQ=255) cGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGa < 1:1649866/150‑1 (MQ=255) gTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCATTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAg > 1:1474421/1‑150 (MQ=255) aCTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTcc > 2:1400141/1‑80 (MQ=255) aCTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTcc < 1:1400141/80‑1 (MQ=255) cGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAgcgcg < 1:367808/145‑1 (MQ=255) cGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAgcgcg > 2:367808/1‑145 (MQ=255) gCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCATTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGa < 2:1474421/150‑1 (MQ=255) tGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGAcc > 2:2064268/1‑150 (MQ=255) aGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGcc > 1:1880639/1‑150 (MQ=255) gAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCgg < 2:310554/141‑1 (MQ=255) gAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCgg > 1:310554/1‑141 (MQ=255) aaGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGtgc < 1:370313/150‑1 (MQ=255) aaGGGCAGTTCGCAAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTa > 1:770554/1‑64 (MQ=37) aaGGGCAGTTCGCAAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTa < 2:770554/64‑1 (MQ=37) aGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCACGCGCTCGCAATGACCCGGTAGCCGCGCGTGCTGCAgg < 1:572789/150‑1 (MQ=255) tttGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGTGCTGCAGgcg < 2:1880639/150‑1 (MQ=255) | CCGAGTTGCTGACCAAGGAGGAGGTGGAGTGGCTGAACGGCTACCACGCCTGCGTACATGAGCGCCT‑GGCGCCCTTGCTCCAAGGGGATGCGCTAGCCTGGCTGGAGATGCGTACTGCACCGCTGTAACGCAGCGGAAAAAGGGCAGTTTGCGAACTGCCCTTTTCTCTATTTACAGATGATGATCATGCTCCGGCTGGTGTAGCCCGCCGGGTTGATGCCGAACAAATAGTCACCGGCCTCTTCATCGCTATCGCCCGAGCGCGCAATGACCCGGTAGCCGCGCGTGCTGCAGGCG > NC_002947/2546717‑2547013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |