| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,651,319 | G→C | 16.9% | intergenic (+41/+29) | PP_2323 → / ← aroF‑I | hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,651,319 | 0 | G | C | 16.9% | 223.3 / 37.3 | 89 | intergenic (+41/+29) | PP_2323/aroF‑I | hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| Reads supporting (aligned to +/- strand): ref base G (34/40); new base C (6/9); total (40/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01 | |||||||||||
AGCGGGCTCTGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATACTGCAAATC > NC_002947/2651172‑2651467 | aGCGGGCTCTGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTg > 2:1020869/1‑150 (MQ=255) gCGGGCTCTGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGc > 2:1081684/1‑150 (MQ=255) ggCTCTGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCACTGCCCg < 2:88624/150‑1 (MQ=255) tctGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCACTGCCCGGCg < 1:1773518/150‑1 (MQ=255) tctGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCAGATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCACTGCCCGGCg < 1:2107520/150‑1 (MQ=255) tGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGtt > 2:337098/1‑150 (MQ=255) tGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGtt < 1:208898/150‑1 (MQ=255) tACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCa < 1:458015/150‑1 (MQ=255) gCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGTCACCAGACACAAC‑AAAAAACGCCGGGCACTGCCCGGCGttttttgttg < 1:2371832/150‑6 (MQ=255) gCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCg > 1:25844/1‑137 (MQ=255) gCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCg < 2:25844/137‑1 (MQ=255) gCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCACTGCCCGGc < 2:1180061/139‑1 (MQ=255) gCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCACTGCCCGGc > 1:1180061/1‑139 (MQ=255) gAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCg < 2:2115147/150‑1 (MQ=255) gATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATg > 2:118963/1‑150 (MQ=255) gATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATg > 1:1411976/1‑150 (MQ=255) ggggTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTc < 2:2401571/150‑1 (MQ=255) gTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGc > 2:978696/1‑150 (MQ=255) gATCCCGTCTTGCTCATATGTGGAGCGTTACAAGGATCTCCATCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTAc < 2:1771082/150‑1 (MQ=255) tCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCgg < 1:490021/150‑1 (MQ=255) ttGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGgca > 1:137252/1‑150 (MQ=255) tGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGgcag < 1:978696/150‑1 (MQ=255) tCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGcac > 2:1559418/1‑150 (MQ=255) tCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGcac > 2:1956164/1‑150 (MQ=255) atatGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACAt > 1:526605/1‑150 (MQ=255) gtgGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCtt < 1:746667/150‑1 (MQ=255) gtgGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCtt < 1:281198/150‑1 (MQ=255) ggAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAACACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGa < 1:2171318/150‑1 (MQ=255) gAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAg < 1:1282585/150‑1 (MQ=255) gAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAg > 2:106295/1‑150 (MQ=255) cGTTACATGGAGCTCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCCATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCtt < 2:1750499/150‑1 (MQ=255) gTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTg < 1:1559418/150‑1 (MQ=255) gTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTg < 1:1081684/150‑1 (MQ=255) ttACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTgg < 1:337098/150‑1 (MQ=255) cATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGgcat < 1:85583/150‑1 (MQ=255) cATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCACAATGTTACCCCGACCAATAC‑CGGGGGCAGCACAGCCTTGAGCTTGgcat > 2:634373/1‑150 (MQ=255) aTGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTa < 2:447272/118‑1 (MQ=255) aTGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTa > 1:447272/1‑118 (MQ=255) tGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGgcatgc < 1:106295/150‑1 (MQ=255) ggAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGgcatgca > 2:1150865/1‑150 (MQ=255) ggAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGgcatgc < 2:722104/149‑1 (MQ=255) ggAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGgcatgc > 1:722104/1‑149 (MQ=255) cgcCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCAtgc‑t < 2:345873/150‑1 (MQ=255) ccAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTAc > 2:1856536/1‑111 (MQ=255) ccAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTAc < 1:1856536/111‑1 (MQ=255) cagcGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACAAGACACCCC‑ACCAGCCGCCCTTCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAg < 1:2342928/150‑1 (MQ=255) agcGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAgg > 1:1077452/1‑150 (MQ=255) ggCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGtt < 1:908119/150‑1 (MQ=255) cATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGtttt < 1:1242747/150‑1 (MQ=255) aTTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTtc > 1:1256250/1‑150 (MQ=255) aTTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGAC‑CACCTAAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTtc < 1:634373/150‑1 (MQ=255) gAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AACAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCgg > 1:2294165/1‑150 (MQ=255) gAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCACTGCCCGGCGtttttt > 2:3760/1‑68 (MQ=255) gAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCACTGCCCGGCGtttttt < 1:3760/69‑2 (MQ=255) gAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCACTGCCCGGCGtttttt < 1:3490/69‑2 (MQ=255) gAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCACTGCCCGGCGtttttt > 2:3490/1‑68 (MQ=255) gCCTGAGCTGACGACAGGCACCAGACACAAC‑AAACAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGa < 1:2029032/150‑1 (MQ=255) gCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTa > 1:2019173/1‑145 (MQ=255) gCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTa < 2:2019173/145‑1 (MQ=255) ccTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGAc < 2:1635852/150‑1 (MQ=255) gCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTc < 2:526605/150‑1 (MQ=255) tGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTc < 1:2166315/54‑1 (MQ=255) tGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTc > 2:2166315/1‑54 (MQ=255) tGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCTGGGTTTTCTCGGTAGCCGACCAGTCGa < 1:1795639/150‑1 (MQ=255) tGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATCCAGCACCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGa < 1:1956164/150‑1 (MQ=255) acgacAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATg > 2:686043/1‑150 (MQ=255) acgacAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATg > 1:1774912/1‑150 (MQ=255) acAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAg < 2:1256250/150‑1 (MQ=255) acAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAg > 2:980120/1‑150 (MQ=255) cAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGAACATCCTTGAGCTTGGCAT‑CCTGCAAGCGGAGGGTGTTGTCGGGAGCCGAGCAGTCGATGCAGGCGTCCGt > 2:1601016/1‑150 (MQ=255) gACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGa < 1:118963/150‑1 (MQ=255) acacAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGtt < 2:1906001/112‑1 (MQ=255) acacAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGtt > 1:1906001/1‑112 (MQ=255) cacaac‑acaaAACGTCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCACCAC‑CGCTTTACCGCCAACTTCACATCCTTGAGCGTCGCATCCATCC‑TCCCCAGCGTTTTTGCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATc < 1:1150865/150‑1 (MQ=255) acaac‑aAAAAACGCCGGGCAGTGCAAGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCg > 2:1699243/1‑150 (MQ=255) ac‑aaAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGaca > 1:1582680/1‑150 (MQ=255) tgaaaaaCGCCGGGCACTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATACTTGAGCTTGGCATGCCTGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGacac > 2:348841/3‑150 (MQ=255) aaaaaaCGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACAAGTCGATGCAGGCGTACGTGATCAACACg > 1:1699180/1‑150 (MQ=255) aaaaaaCGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGACATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACg > 1:1520223/1‑150 (MQ=255) aaaaaCGCCGGGCACTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGgca < 1:547418/86‑1 (MQ=255) aaaaaCGCCGGGCACTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTCACGCTGCGGCAGCACATCCTTGAGCTTGgca > 2:547418/1‑86 (MQ=255) aaagCGCCGGGCACTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCGTGCATGC‑TGCGCa < 2:187224/98‑1 (MQ=255) aaaaCGCCGGGCACTGCCCGGCGGTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCa > 1:187224/1‑98 (MQ=255) aaCGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCAt > 1:123926/1‑150 (MQ=255) cGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCtt > 2:2149186/1‑77 (MQ=255) cGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCtt < 1:2149186/77‑1 (MQ=255) cGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATACTGc > 2:2115364/1‑150 (MQ=255) ggCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATACTGCaa < 2:1774912/150‑1 (MQ=255) aGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGATCCTCGCGTGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATACTGCAAATc < 1:1020869/150‑1 (MQ=255) | AGCGGGCTCTGGAGTACGCCGAGCAGATGGGGTACACGGTGATCCCGTCTTGCTCATATGTGGAGCGTTACATGGAGCGCCAGCAGCGGCATTCGAGCAAGGCCTGAGCTGACGACAGGCACCAGACACAAC‑AAAAAACGCCGGGCAGTGCCCGGCGTTTTTCATTCCCGCAATGTTCAGCCG‑CGCTTACGCTGCGGCAGCACATCCTTGAGCTTGGCATGCATGC‑TGCGCAGGGTTTTCTCGGTAGCCGACCAGTCGATGCAGGCGTCCGTGATCGACACGCCATACTGCAAATC > NC_002947/2651172‑2651467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |