| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,763,234 | C→G | 5.5% | R240R (CGG→CGC) | PP_2417 ← | iron ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,763,234 | 0 | C | G | 5.5% | 345.7 / 9.2 | 110 | R240R (CGG→CGC) | PP_2417 | iron ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (50/52); new base G (2/4); total (54/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.03e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
GGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAGCGCACGCCGCTCAGGTTGC > NC_002947/2763090‑2763382 | gggCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCAc > 1:311420/1‑150 (MQ=255) cAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCCCCGCACGCTCCAGCGCGTCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCgg < 1:421320/150‑1 (MQ=255) cAACAGACGGCTGTGCCCGGGGCCGAGCAGAAAGCGTAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCgg < 1:738082/150‑1 (MQ=255) aaCAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCggg < 1:1889786/150‑1 (MQ=255) aGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCAGTCATCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATg < 1:1377939/150‑1 (MQ=255) gACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGTATTACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCCTCACCAGCGCTGCACAACTGATCAGCAGCATCCCGGTGCGGCGCAcccagttgc < 2:1037126/150‑8 (MQ=255) ggCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATg < 1:2059284/146‑1 (MQ=255) ggCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATg > 2:2059284/1‑146 (MQ=255) cTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGc > 2:1722712/1‑150 (MQ=255) tgtgCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCg > 2:815555/1‑150 (MQ=255) gtgCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGa < 2:1310200/150‑1 (MQ=255) tgCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAg < 1:877955/150‑1 (MQ=255) tgCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAg < 1:846688/150‑1 (MQ=255) tgCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAg < 1:1672633/150‑1 (MQ=255) ggCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAg < 2:1114002/149‑1 (MQ=255) cccGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAggc > 1:882245/1‑150 (MQ=255) ccGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAggcg < 1:1722712/150‑1 (MQ=255) ccGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAggcg > 1:766297/1‑150 (MQ=255) ggggCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCTGGATGCCCAGCGAggcggc < 1:1121126/150‑1 (MQ=255) cgtgcacaGCAGAATGCGCAAGGCATGCGGTATAACCAGCCCGACAAAACCTATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCTCACCGGGATGCCCAGCGAggcggc < 2:707153/143‑1 (MQ=255) gCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGa < 2:230606/150‑1 (MQ=255) gCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGa < 1:2336752/150‑1 (MQ=255) gAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAg < 2:683687/139‑1 (MQ=255) gAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAg > 1:683687/1‑139 (MQ=255) gCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCgg > 2:1677425/1‑150 (MQ=255) cgcAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAg < 2:1029713/150‑1 (MQ=255) gCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAg < 2:882245/150‑1 (MQ=255) gCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAg < 1:966589/150‑1 (MQ=255) aTGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCAc < 2:1688422/105‑1 (MQ=255) tGGGGGATAACCAGCACGACAAAACCGCTGGCGCCGACAATGGACACCATCACCGCCGACACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGCAGGCa > 2:866906/1‑150 (MQ=255) gggggATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCAt > 1:1794658/1‑150 (MQ=255) acAGCCCGACAAACCCGATGGGGCCGACAATGGACACCACCACCGCCGTCACCAGCGCTGCCCACATGATCCGAACCAACTGGGTGCGACGCACCGGCATGCCCCGCAAGGCCACCGCGTCGGCACCGAACGTGAAGGGCTCCAgcgcgc > 2:81355/2‑148 (MQ=255) ccGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGa > 1:995157/1‑150 (MQ=255) cGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCCCCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGAt < 1:1224705/150‑1 (MQ=255) gACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATg > 2:721501/1‑150 (MQ=255) aaaaCCGATGGCGCCGACAATGGAAACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCca < 1:1090694/150‑1 (MQ=255) aaaCCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAg > 1:927685/1‑126 (MQ=255) aaaCCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAg < 2:927685/126‑1 (MQ=255) aaCCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCcaca > 1:576614/1‑150 (MQ=255) aaCCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCcaca > 1:390263/1‑150 (MQ=255) aCCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGAt < 1:262258/143‑1 (MQ=255) aCCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGAt > 2:262258/1‑143 (MQ=255) aCCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAg < 2:819234/150‑1 (MQ=255) ccGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAgg < 2:576614/150‑1 (MQ=255) ccGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAgg > 1:1273004/1‑150 (MQ=255) cGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGc < 1:1369087/92‑1 (MQ=255) cGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGc > 2:323954/1‑150 (MQ=255) cgcCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCa < 1:815555/150‑1 (MQ=255) cgcCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCa < 1:1677425/150‑1 (MQ=255) ccGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCa < 2:2127201/102‑1 (MQ=255) ccGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCGCAGGCACACCAGc > 1:2263150/1‑150 (MQ=255) aCAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAg < 1:1273379/150‑1 (MQ=255) cAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGaa < 2:1068051/103‑1 (MQ=255) cAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGaa > 1:1068051/1‑103 (MQ=255) aaTGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGcc > 1:616195/1‑150 (MQ=255) ggACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGccc < 2:2067918/73‑1 (MQ=255) ggACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGccc > 1:2067918/1‑73 (MQ=255) ccATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCg > 2:2198497/1‑150 (MQ=255) cATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGc < 1:2212059/65‑1 (MQ=255) cATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGc > 2:2212059/1‑65 (MQ=255) aTCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGcc > 2:1399294/1‑150 (MQ=255) tCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCa > 1:1788507/1‑150 (MQ=255) cACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAggcggc < 1:2333799/75‑1 (MQ=255) cACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAggcggc > 2:2333799/1‑75 (MQ=255) cACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCAc > 2:1700448/1‑150 (MQ=255) cgTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTAc > 1:254296/1‑150 (MQ=255) tCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATTCCCAGCGAGGCGGCCGCGTCGGCACCGAAGGTGAACGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGGACgg > 1:694140/1‑150 (MQ=255) cAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGgccag > 2:641290/1‑150 (MQ=255) aGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGgccagc > 2:2356842/1‑150 (MQ=255) aGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGgccagc < 1:641290/150‑1 (MQ=255) cgcTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGgccagcca < 1:1399294/150‑1 (MQ=255) gCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCgg > 1:1465565/1‑64 (MQ=255) gCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCgg < 2:1465565/64‑1 (MQ=255) cacaACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAggc > 1:1565363/1‑52 (MQ=255) cacaACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAggc < 2:1565363/52‑1 (MQ=255) cacaACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCg > 1:754997/1‑150 (MQ=255) aaCTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCa > 2:846810/1‑111 (MQ=255) aaCTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCa < 1:846810/111‑1 (MQ=255) aaCTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAg < 1:1285702/150‑1 (MQ=255) aaCTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAg > 1:1389765/1‑150 (MQ=255) tGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGGACGGCCAGCCACACCGAAGGca > 2:508744/1‑149 (MQ=255) gATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCa < 2:754997/150‑1 (MQ=255) agcagcAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAgcgc > 1:698898/1‑150 (MQ=255) gcagcaACTGGGTGCGCCGCACCGGGATGCCCAGAGAGGCAGACAAGTCGGCACCGGAGGTGACGGCAGCCAGCGCACGGCGATGCGACAGGCACACCAGCAAGCCGAAACCCGCCACCGTTACGGCCCGCCACACAGAAGGAGAgcgaa > 2:205935/1‑148 (MQ=255) agcaACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAGCGCAcg > 2:2165392/1‑150 (MQ=255) gcaACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAGCGCAcgc > 1:570896/1‑150 (MQ=255) aaCTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAGCGCAcgccg > 2:1455463/1‑150 (MQ=255) tcccggTGCGGCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGc < 2:1367631/133‑1 (MQ=255) cTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCcaca > 1:2097266/1‑83 (MQ=255) cTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCcaca < 2:2097266/83‑1 (MQ=255) tGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGaa < 1:1963765/56‑1 (MQ=255) tGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGaa > 2:1963765/1‑56 (MQ=255) tGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAGCGCACGCCGCTc > 1:1156281/1‑150 (MQ=255) ccggTGCGGCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGaa > 2:670772/3‑56 (MQ=38) ccggTGCGGCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGaa < 1:670772/54‑1 (MQ=38) gggTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAGCGCACGCCGCTCa < 2:766297/150‑1 (MQ=255) ggTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAgg < 2:895817/132‑1 (MQ=255) ggTGCGCCGCACCGGGATCCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAGCGCACGCCGCTCAg < 2:616195/150‑1 (MQ=255) gccgcACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAGCGCACGCCGCTCAGGTTGc > 1:1146373/1‑150 (MQ=255) gccgcACCGGGATGACCAGCGAGGCGGCCGAGGCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAGCGCACGCCGCTCAGGTTGc > 2:1955729/1‑150 (MQ=255) | GGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGACAATGGACACCATCACCGCCGTCACCAGCGCTGCACAACTGATCAGCAGCAACTGGGTGCGCCGCACCGGGATGCCCAGCGAGGCGGCCGAGTCGGCACCGAAGGTGAAGGCATCCAGCGCACGGCGATGCCACAGGCACACCAGCAAGCCGAAAACCGCCACCGGTACGGCCAGCCACACCGAAGGCCAGCGCACGCCGCTCAGGTTGC > NC_002947/2763090‑2763382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |