| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,826,868 | G→C | 5.7% | A80P (GCA→CCA) | PP_2479 → | cytochrome c family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,826,868 | 0 | G | C | 5.7% | 278.0 / 7.2 | 88 | A80P (GCA→CCA) | PP_2479 | cytochrome c family protein |
| Reads supporting (aligned to +/- strand): ref base G (40/43); new base C (3/2); total (43/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.78e-01 | |||||||||||
GGGCGAATACCTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCGACA > NC_002947/2826720‑2827009 | ggacGAATACCTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGc > 2:1678015/4‑150 (MQ=255) ggCGAATACCTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCa > 1:1798344/1‑150 (MQ=255) aTACCTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGAc < 2:1266366/150‑1 (MQ=255) cTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGAt > 2:2021850/1‑150 (MQ=255) cTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCCGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGAt > 2:721385/1‑150 (MQ=255) tGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATg > 1:2137566/1‑150 (MQ=255) cgcgcgCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTCCATGCACCGATGCCg < 2:233122/150‑1 (MQ=255) gcgcgcTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGa < 2:2137566/150‑1 (MQ=255) cgcgcTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAg < 2:874247/150‑1 (MQ=255) tGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGt < 2:1798344/150‑1 (MQ=255) ccAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGAGTTGAGTTCCCGTTGCCGCTTGGTTCCCTTTGTTCTCCCAACGTGACCCCGTACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCa < 2:1478157/150‑1 (MQ=255) ccAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCACCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCa < 1:742570/150‑1 (MQ=255) ccAACTGTGTGGCTTGCCATACCGTGCCCGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCa < 1:721385/150‑1 (MQ=255) aaCTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTCCATGCAcc > 1:1309739/1‑132 (MQ=255) aaCTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTCCATGCAcc < 2:1309739/132‑1 (MQ=255) aCTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTg < 2:950211/150‑1 (MQ=255) gtgtgGCTTGCCATACTTTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTgcgc < 1:2043098/150‑1 (MQ=255) tgtgGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCt > 2:212000/1‑150 (MQ=255) tgGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGa > 1:864028/1‑133 (MQ=255) tgGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGa < 2:864028/133‑1 (MQ=255) gCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAg > 1:1215560/1‑150 (MQ=255) cTTGCCCTACCGTGCCTGCACGTCAACCCTGCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTTTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGa < 1:42089/150‑1 (MQ=255) ttGCCATAGCGTGCCTGGCGGTCAACCATTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCCGACCGCTGTTTTCTCCCAACATTACCAGGGACCCGCAAACCGGCATAGTTGCATGGACCGATGACGACTTTGTCCGTGCGCTTCCGAc > 2:232736/1‑150 (MQ=255) ttGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGAc < 2:1215560/150‑1 (MQ=255) gCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCg < 1:2271443/150‑1 (MQ=255) cATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCAGCATCGGTGCATGGTCCTATTACAAGGTCGTCAGTGAGCTCCacaaaggc > 2:999961/1‑143 (MQ=255) aTACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCa > 2:447450/1‑150 (MQ=255) aCCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCAtt < 1:999961/150‑1 (MQ=255) ccGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTg < 2:1195034/150‑1 (MQ=255) catGGCGGTCAACCCTTAGCCGGTGGTGTAGAGTTCAAGCTGCCGTTCGGCTCGGTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGAACGGCATTGGCCGt < 2:905141/148‑1 (MQ=255) cTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGc < 1:1435170/146‑1 (MQ=255) cTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGc > 2:1435170/1‑146 (MQ=255) cTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTg > 1:681411/1‑150 (MQ=255) tGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGa > 1:87902/1‑150 (MQ=255) gCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCAt > 1:1449358/1‑99 (MQ=255) gCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCAt < 2:1449358/99‑1 (MQ=255) gTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATGACCCGGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCa > 1:2123296/1‑150 (MQ=255) aCCCTGCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAGCATTACCCCGGATCCGCGGAGCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAgga < 2:536485/150‑3 (MQ=255) cccTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCac > 2:2210311/1‑150 (MQ=255) ccTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCact > 1:367354/1‑150 (MQ=255) ccTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCact > 1:1677842/1‑150 (MQ=255) cTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCacta < 2:1737594/150‑1 (MQ=255) cTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCacta > 2:1238456/1‑150 (MQ=255) gCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACtactac < 1:212000/150‑1 (MQ=255) gtTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGttt < 1:1678015/150‑1 (MQ=255) ttGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCTCGCCCACGCAAACCGGCATCGGGGCATGGACCGAGGACTAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTc < 2:1476959/150‑1 (MQ=255) ttGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTc > 2:2160000/1‑150 (MQ=255) tGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTcc < 1:2019069/150‑1 (MQ=255) gAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCaa < 2:60116/128‑1 (MQ=255) gAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCaa > 1:60116/1‑128 (MQ=255) cTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATAcctcc < 2:87902/150‑1 (MQ=255) cGTTCGGCTCGCTGTTTTCTCCCAACCTTACTCGGCACCCGCAAACCGGCATCGGTGCATGGACCGATGACGCGTTCGTCAGTTCGCTTCTGACCGGCATTGGCCGTGACGGTAAGCACTACTACCCGGCGTTTCCCTATACCTCCcaca < 2:143293/150‑1 (MQ=255) gCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCaaaa > 1:758361/1‑150 (MQ=255) gCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCaaaa > 1:2027198/1‑150 (MQ=255) cTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAATCCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCa > 1:1948865/1‑111 (MQ=255) cTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCa < 2:1948865/111‑1 (MQ=255) gCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTc < 1:1238456/150‑1 (MQ=255) tCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGAt < 1:588987/150‑1 (MQ=255) cccAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCa > 2:603809/1‑94 (MQ=255) cccAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCa < 1:603809/94‑1 (MQ=255) cccAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAAt < 2:775605/137‑1 (MQ=255) cccAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAAt > 1:775605/1‑137 (MQ=255) ccAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACa < 1:2160000/150‑1 (MQ=255) cAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAg < 2:259458/94‑1 (MQ=255) cAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAg > 1:259458/1‑94 (MQ=255) cAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCactac < 2:1242953/100‑1 (MQ=255) cAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCactac > 1:1242953/1‑100 (MQ=255) aaCATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCa < 1:868224/95‑1 (MQ=255) aaCATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCa > 2:868224/1‑95 (MQ=255) ttACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTcg > 1:1340980/1‑150 (MQ=255) aCCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTcgcg > 2:2002518/1‑150 (MQ=255) ccccGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGa < 1:2002518/150‑1 (MQ=255) cccGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGAt > 1:2112880/1‑150 (MQ=255) cccGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGAt > 2:2380005/1‑150 (MQ=255) ccGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCaa < 1:1114007/83‑1 (MQ=255) ccGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCaa > 2:1114007/1‑83 (MQ=255) ccGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATc > 1:1840139/1‑150 (MQ=255) ggACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTgg < 2:1251730/69‑1 (MQ=255) ggACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTgg > 1:1251730/1‑69 (MQ=255) gACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAg < 1:1089434/150‑1 (MQ=255) ccGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGt > 2:1135197/1‑150 (MQ=255) aaCCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTAtct < 1:1674521/150‑1 (MQ=255) aCCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGc > 2:557417/1‑73 (MQ=255) aCCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGc < 1:557417/73‑1 (MQ=255) tcgtcATCGGTCCATGCACCGATGCCGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCg > 2:1396074/5‑150 (MQ=255) tcATCGGTCCATGCACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCGACa > 2:1855881/2‑150 (MQ=255) aTCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTAtc < 2:437589/142‑1 (MQ=255) aTCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTAtc > 1:437589/1‑142 (MQ=255) gCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTcc < 2:1467019/80‑1 (MQ=255) gCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTcc > 1:1467019/1‑80 (MQ=255) | GGGCGAATACCTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAACCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCAAGCACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCGACA > NC_002947/2826720‑2827009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |