| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 258,954 | T→A | 7.7% | V163D (GTC→GAC) | PP_0207 → | nitrate ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 258,954 | 0 | T | A | 7.7% | 347.0 / 15.1 | 115 | V163D (GTC→GAC) | PP_0207 | nitrate ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (51/55); new base A (4/5); total (55/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.24e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
ATCAGTGTGCTGTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAACCGTGGCTTCG > NC_002947/258806‑259100 | atcaGTGTGCTGTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCACGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCCCGGCATGCTGTTGCGCGCCGTc > 2:252625/1‑150 (MQ=255)atcaGTGTGCTGTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTc > 1:2174925/1‑150 (MQ=255)atcaGTGTGCTGTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTc > 2:1606823/1‑150 (MQ=255) tgCTGTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCgcgc > 1:1973764/1‑150 (MQ=255) tGTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGGCGACGGCGCGCaac < 2:1056920/150‑3 (MQ=255) tGTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAgg > 2:1322589/1‑150 (MQ=255) tGTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAgg < 2:1902647/150‑1 (MQ=255) tGTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAgg < 1:598260/150‑1 (MQ=255) gTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGGCGACGGCGCGCaaca < 2:1808151/150‑4 (MQ=255) cGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCt < 2:1381082/150‑1 (MQ=255) cGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCt < 2:542645/150‑1 (MQ=255) gggCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTg < 2:103194/150‑1 (MQ=255) ggCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTgg < 2:2161843/150‑1 (MQ=255) ggCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTgg < 2:474356/150‑1 (MQ=255) ggCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAg < 2:2082985/150‑1 (MQ=255) agcGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCgg > 1:1668622/3‑150 (MQ=255) aaCGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCgg > 2:2153107/1‑150 (MQ=255) aaCGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCgg < 1:2119428/150‑1 (MQ=255) aCGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGa > 1:670138/1‑150 (MQ=255) aCGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGa < 2:777008/150‑1 (MQ=255) aCGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCGATTTGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGa < 1:1833473/150‑1 (MQ=255) gCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGatca < 1:2007199/150‑1 (MQ=255) aTCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGatcatc > 1:1595034/1‑150 (MQ=255) cgtGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCa < 2:1617850/150‑1 (MQ=255) gtGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTgg > 1:2403660/1‑117 (MQ=255) gtGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTgg < 2:2403660/117‑1 (MQ=255) gtGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAg < 2:670138/150‑1 (MQ=255) gtGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAg < 1:1606823/150‑1 (MQ=255) tGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGAccc < 2:1959667/121‑1 (MQ=255) ctccgccTCCAGCGTGCAGTCGCTGGCGGAGCTTAAGGCCAAGACCTTTTCCGTGCCGTTCGCCTCCTCAGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGcc < 2:1706200/148‑1 (MQ=255) ccgccTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCa > 1:458695/1‑142 (MQ=255) ccgccTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCa < 2:458695/142‑1 (MQ=255) gccTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGaa < 1:2147782/150‑1 (MQ=255) tCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAGATc > 2:1592372/1‑150 (MQ=255) tCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATc > 2:1699831/1‑150 (MQ=255) gCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCt > 1:1639635/1‑150 (MQ=255) gCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCt < 1:2153107/150‑1 (MQ=255) cTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTg > 1:160935/1‑150 (MQ=255) tGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTgc < 1:253759/150‑1 (MQ=255) gCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAg > 1:18115/1‑99 (MQ=255) gCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAg < 2:18115/99‑1 (MQ=255) cGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGACGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCgca < 1:163224/150‑1 (MQ=255) gCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCaa < 1:433910/150‑1 (MQ=255) cTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCAACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAAc < 1:1123227/150‑1 (MQ=255) aaGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTgg < 2:642217/78‑1 (MQ=255) aaGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTgg > 1:642217/1‑78 (MQ=255) aaGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGc > 1:1651740/1‑150 (MQ=255) aGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGGCGACGGCGCGCaaca < 1:191371/73‑4 (MQ=37) aGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCa > 2:1987027/1‑150 (MQ=255) ggCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATc < 2:1639635/150‑1 (MQ=255) ggCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATc < 2:160935/150‑1 (MQ=255) aaGACCATTTCCGTTCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGaa < 1:2176399/150‑1 (MQ=255) aaGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGaa < 1:597308/150‑1 (MQ=255) gACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGaa > 2:187328/1‑148 (MQ=255) gACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGaa < 1:187328/148‑1 (MQ=255) aCCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCgg < 2:832586/90‑1 (MQ=255) aCCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGcc > 2:1629588/1‑150 (MQ=255) ccATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGccc < 1:131802/150‑1 (MQ=255) aTTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGc > 2:1048898/1‑73 (MQ=255) aTTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGc < 1:1048898/73‑1 (MQ=255) aTTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATc > 2:466625/1‑141 (MQ=255) aTTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATc < 1:466625/141‑1 (MQ=255) gTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGAc < 2:1668622/150‑1 (MQ=255) tGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACt > 2:2407463/1‑150 (MQ=255) ttCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTg > 2:1115416/1‑150 (MQ=255) ccTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGcc > 1:2191267/1‑131 (MQ=255) ccTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGcc < 2:2191267/131‑1 (MQ=255) cTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGtt < 2:1888157/150‑1 (MQ=255) tCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAg < 2:454538/127‑1 (MQ=255) tCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAg > 1:454538/1‑127 (MQ=255) tCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAAACGCGCGGC‑ATTCCCAGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTc > 2:1268930/1‑150 (MQ=255) aCTGCCCACGGCATGCTGTTGCGCGCCGTCGCCTCGCAGGGCTGGGACCCGCATAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑AGGCTCCGCCCTGCGCAGCAACCACATCGAAGGTCACGCCGACTTCGTGCCTTTCGcc > 1:754471/1‑150 (MQ=255) aCTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGcc > 2:1423279/1‑150 (MQ=255) cTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCg > 2:1922725/1‑150 (MQ=255) ccACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAg < 2:1358165/148‑1 (MQ=255) ccACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAg > 1:1358165/1‑148 (MQ=255) cACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGatca < 1:1152362/64‑1 (MQ=255) cACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGatca > 2:1152362/1‑64 (MQ=255) cACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTa < 2:1973764/150‑1 (MQ=255) ggCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACt < 2:1913776/127‑1 (MQ=255) ggCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACt > 1:1913776/1‑127 (MQ=255) ggCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTc < 1:1922725/150‑1 (MQ=255) ggCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTc < 1:1987027/150‑1 (MQ=255) cATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGaa > 1:669847/1‑45 (MQ=255) cATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGaa < 2:669847/45‑1 (MQ=255) cagccctGCGCGGCGACGGCGCGCAAGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCa > 1:705846/7‑150 (MQ=255) tGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAAcc > 1:363912/1‑150 (MQ=255) gTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGt < 1:2151853/137‑1 (MQ=255) gTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGt > 2:2151853/1‑137 (MQ=255) gTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAACCg > 1:555038/1‑150 (MQ=255) gTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAACCg > 1:1516137/1‑150 (MQ=255) cctGCGCGGCGACGGCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCAAGCCGACTTCGTGCCGTTCGCCGAGTGAGTCCCCAACCg > 2:522579/3‑150 (MQ=255) ttGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAACCGt > 2:380163/1‑150 (MQ=255) ttGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAACCGt < 1:252625/150‑1 (MQ=255) ttGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAACCGt > 1:879182/1‑150 (MQ=255) ttGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAACCGt > 1:905261/1‑150 (MQ=255) ctGCGCGGCGACGGCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGcc > 2:1094607/2‑114 (MQ=255) ctGCGCGGCGACGGCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGcc < 1:1094607/113‑1 (MQ=255) tGCGCGGCGACGGCGCGCAAGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAACCGTg < 2:705846/150‑1 (MQ=255) tGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAACCGTg < 1:248969/150‑1 (MQ=255) | ATCAGTGTGCTGTCGGGCAGCGTGCATGGCAGCGGCAACGGCATCGTCGTGCCCGCCGCCTCCAGCGTGCAGTCGCTGGCGGAGCTCAAGGGCAAGACCATTTCCGTGCCGTTCGCCTCCACTGCCCACGGCATGCTGTTGCGCGCCGTCGCCGCGCAGGGCTGGGACCCGCAGAAGGATGTGCGGATCATCGCCCAGGCGCCGGAAATCGC‑CGGCTCCGCCCTGCGCAGCAACCGCATCGAAGCCCACGCCGACTTCGTGCCGTTCGCCGAGTTATTCCCCAACCGTGGCTTCG > NC_002947/258806‑259100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |