| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,957,161 | C→G | 9.0% | intergenic (+73/‑123) | PP_2588 → / → PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,957,161 | 0 | C | G | 9.0% | 335.7 / 18.8 | 108 | intergenic (+73/‑123) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| Reads supporting (aligned to +/- strand): ref base C (56/42); new base G (2/8); total (58/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.20e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
GATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAAC > NC_002947/2957023‑2957308 | gATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGc < 1:186636/150‑1 (MQ=255) tGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCt < 2:1453605/150‑1 (MQ=255) tacatttgtactccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGAt < 2:1606836‑M1/63‑1 (MQ=255) gCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTCGGACCGCGGTTCG‑TTGCGTTGATGGGCGAAGCCGGTGCCATCCACCGCGTCGCCTGac > 1:1740391/1‑149 (MQ=255) gtggAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGAttcgc > 2:1203289‑M2/1‑145 (MQ=255) ggAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGAttcgcgg > 1:1836965‑M2/1‑143 (MQ=255) ggAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGAttcgcgg > 1:1836978‑M2/1‑143 (MQ=255) gagaAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGACGGATCCAGCCACCTTGTCGCCTTAttcgcggg < 2:22280‑M2/150‑9 (MQ=255) gagaAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACCAGCTTCCATGTGGGCGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGAttcgcggg < 2:82853‑M2/150‑9 (MQ=255) gaagaCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCa < 1:1447503/150‑1 (MQ=255) tccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTTGGAGCG‑GGCACGCCCGCGAACACCGGCTAAGGCGGTGCCATGCACCGTGTCGCCTTAttcgcggccctg < 2:2309509‑M1/74‑6 (MQ=255) gaCCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGc < 2:2306474/150‑1 (MQ=255) ccGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCg > 1:945818/1‑150 (MQ=255) ggATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCt > 1:1017926/1‑150 (MQ=255) gCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCcac > 1:1220791/1‑150 (MQ=255) tcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCTCCTGATTCGCGGGCATGcc > 2:825035‑M1/65‑140 (MQ=255) tcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGcc < 1:825035‑M1/76‑1 (MQ=255) tggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACagag > 1:1606836‑M1/62‑150 (MQ=255) tAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACagag < 1:22280/150‑1 (MQ=255) aCCGCCCGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACCCCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGa < 2:1787224/150‑1 (MQ=255) gtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGt > 1:2309509‑M1/57‑150 (MQ=255) cGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGt > 2:353325/1‑150 (MQ=255) gtcgatcttgcgcaagtaacaggtaccacacattccgcaagcacgccgcgcttccCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTGGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTg > 2:187362‑M1/56‑150 (MQ=255) gCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTg > 1:2365071/1‑150 (MQ=255) ggCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTgcggc > 2:1911968/1‑150 (MQ=255) ggCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTgcggc < 2:649374/150‑1 (MQ=255) gcgGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTg > 2:1685712/1‑150 (MQ=255) caagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCgg < 2:1943095‑M1/69‑1 (MQ=255) caagtaacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCgg > 1:1943095‑M1/45‑113 (MQ=255) taacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCa < 1:888437‑M1/72‑1 (MQ=255) taacaggtaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCa > 2:888437‑M1/41‑112 (MQ=255) taacaggcaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTcgcg < 2:2115623‑M1/68‑1 (MQ=255) taacaggcaccacacagtccgcaagcacgccgcactccctCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTcgcg > 1:2115623‑M1/41‑108 (MQ=255) gCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtg > 2:56417/1‑150 (MQ=255) aaGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtg > 2:2164510/1‑150 (MQ=255) aaGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtg < 1:678389/150‑1 (MQ=255) cTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTgg > 2:7001/1‑150 (MQ=255) tAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑AGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTAc > 1:2291477/1‑150 (MQ=255) aGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCt < 2:1705257/150‑1 (MQ=255) aGCCGCTGACAAGGGCAACGCGCTTCCCTGCGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGc > 1:1310948/1‑102 (MQ=255) aGCCGCTGACAAGGGCAACGCGCTTCCCTGCGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGc < 2:1310948/102‑1 (MQ=255) ccGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGt > 2:1491879/1‑150 (MQ=255) cGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgt > 1:2116204/1‑138 (MQ=255) cGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgt < 2:2116204/138‑1 (MQ=255) aCAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTg > 1:809247/1‑150 (MQ=255) aaGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTgcg > 1:1605727/1‑150 (MQ=255) gggCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTgcggc < 2:1628536/114‑1 (MQ=255) gggCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTgcggc > 1:1628536/1‑114 (MQ=255) aaCGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaagaa > 2:2094048/1‑150 (MQ=255) aaCGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaagaa > 2:2081975/1‑150 (MQ=255) aCGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaagaag < 1:1104026/150‑1 (MQ=255) aCGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaagaag < 1:1491879/150‑1 (MQ=255) aCGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaagaag < 2:2221441/150‑1 (MQ=255) aCGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaagaag < 1:1191779/150‑1 (MQ=255) cgcgCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgtg > 2:2231415/1‑126 (MQ=255) cgcgCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACtgtgtg < 1:2231415/126‑1 (MQ=255) cgcTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGAc < 1:2170140/150‑1 (MQ=255) cTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCg > 2:1515111/1‑150 (MQ=255) ttCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGc > 2:1304538/1‑107 (MQ=255) ttCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGc < 1:1304538/107‑1 (MQ=255) ttCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGcccaa > 2:1210018/1‑148 (MQ=255) ttCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGc < 1:56417/150‑1 (MQ=255) ttCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCACCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTg < 2:317066/128‑1 (MQ=255) ttCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCACCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTg > 1:317066/1‑128 (MQ=255) ccTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGt < 2:1518139/95‑1 (MQ=255) ccTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGt > 1:1518139/1‑95 (MQ=255) cTGTAGGAGCG‑GGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGAttcgcgggcacgcccgctcccacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctcacagg < 2:1559743‑M2/150‑89 (MQ=255) TGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCacga > 1:2124613‑M1/1‑150 (MQ=255) TGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGCGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCacgacg > 2:1731457‑M1/1‑150 (MQ=255) G‑GGCACGCCCGCGAACACCGGAGAAGCCGGTGGCATCCACCGCATAGCCTGCAAGTGGTGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGttt > 2:64167‑M1/1‑150 (MQ=255) tGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTg > 1:82853‑M1/2‑150 (MQ=255) GCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTgg < 1:131769‑M1/150‑1 (MQ=255) CACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGa > 1:118419‑M1/1‑150 (MQ=255) CACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGa > 1:2094048‑M1/1‑150 (MQ=255) CACGCCCGCGAACACCGGCGAAGCAGGCACCTTCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGa > 1:1210018‑M1/1‑150 (MQ=255) gCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGtc < 2:102676/150‑2 (MQ=255) cgcgAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGAttcgcgggtgaacccgctcctacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctcacaggcaacctgctgatcggccag < 1:1859322‑M2/150‑108 (MQ=255) gAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATg > 2:1217269/1‑150 (MQ=255) aaCACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGAttcgcgggtgaacccgctcctacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctcacaggcaacctgctgatcggccagaggc < 1:164897‑M2/150‑112 (MQ=255) acacCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGAttcgcgggtgaaaccgctcctacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctcacaggaaagctaccgaacggccagaggcc < 2:748874‑M2/150‑113 (MQ=255) cacCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGAttcgcgggtgaacccgctcctacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctcacaggcaacctgctgatcggccagaggccg > 2:1859322‑M2/1‑37 (MQ=255) cacCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGAttcgcgggcacgcccgctcccacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctcacaggcaacctgctgatcggccagaggccg > 1:1559743‑M2/1‑37 (MQ=255) cGGCGAAGCCGGTGCCATGCACCGGGTCGCCGGTgttcgcgggtgaacccgctcctacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctcacaggcaacctgctgatcggccagaggccggt < 2:1752068‑M2/150‑117 (MQ=255) cGGCGAAGCCGGTGCCATGCACCGGGTCGCCGGTgttcgcgggtgaacccgctcctacaggggtcgtaatcccccccatgcatctgcattagatttccaaggaggctacatgcccctcacaggcaacctgctgatcggccagaggccggt < 1:1284959‑M2/150‑117 (MQ=255) cGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCaa > 1:1591702/1‑108 (MQ=255) gCGAAGCCGGTGCCATCCACCGTGTCGCCTGCTTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACActct < 2:1332754/150‑1 (MQ=255) cGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACtctc < 2:2374002/150‑1 (MQ=255) aGCCGGTGCCATGCACCGGGTCGCCGGTgttcgcgggtgaacccgctcctacaggggtcgtaatcccccccatgcatctgcattagat < 1:1288127‑M2/88‑61 (MQ=255) gTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTa > 1:195350/1‑81 (MQ=255) gTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTa < 2:195350/81‑1 (MQ=255) gTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTg < 2:809247/150‑1 (MQ=255) gTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTg < 1:353325/150‑1 (MQ=255) tGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTgg < 2:2291477/150‑1 (MQ=255) gCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTCGCGCATAGATGTACACTCTCGAATTCTGGc < 1:327951/150‑1 (MQ=39) cATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGttt > 1:2357361/1‑117 (MQ=255) cATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGttt < 2:2357361/117‑1 (MQ=255) aTCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGATTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGcaac > 1:301084/1‑150 (MQ=255) aTCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTTCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGcaac > 1:56361/1‑150 (MQ=255) aTCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGttt > 2:73867/1‑116 (MQ=255) aTCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGttt < 1:73867/116‑1 (MQ=255) | GATGAGCTGGTGGAGAAGACCCGGATAGCCGTAGACCGCACGGCGCGGCTGGTCGGCAAGCTGTAAGCCGCTGACAAGGGCAACGCGCTTCCCTGTGGGAGCG‑GGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAAC > NC_002947/2957023‑2957308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |