| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,966,460 | T→A | 5.7% | R70R (CGA→CGT) | PP_2595 ← | ABC transporter permease/ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,966,460 | 0 | T | A | 5.7% | 329.7 / 8.4 | 106 | R70R (CGA→CGT) | PP_2595 | ABC transporter permease/ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (50/49); new base A (4/2); total (54/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.59e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
GTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTACAGCACGGTCATCA > NC_002947/2966311‑2966608 | gTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGt < 1:830355/150‑1 (MQ=255) cccTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGc < 1:267860/150‑1 (MQ=255) tGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAg < 2:2143161/150‑1 (MQ=255) ggTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGc < 1:109840/150‑1 (MQ=255) ggTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTCTGTTTTCCCATTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGc < 1:1738591/150‑1 (MQ=255) gATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGACGCCAggtgga < 1:2311454/150‑5 (MQ=255) tCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGc > 1:2327103/1‑150 (MQ=255) caTGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGcaca < 2:1053374/150‑1 (MQ=255) caTGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGcaca > 1:37255/1‑150 (MQ=255) tGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGTGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGc < 2:1142444/150‑1 (MQ=255) cGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCa > 1:1076828/1‑150 (MQ=255) ccGCGCGGTGTTGTCAGGGGTGACCCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATTTGCTGGAGGGCTTCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGcc < 1:43693/150‑1 (MQ=255) ggTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCggcggc > 2:237538/1‑150 (MQ=255) tgttgtCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCa > 1:1947053/1‑150 (MQ=255) ttgtCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCCCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGc > 2:2161839/1‑150 (MQ=255) ttgtCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGACGCCAggtg < 1:9996/123‑3 (MQ=255) tgtCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCa < 1:2161839/150‑1 (MQ=255) tCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACg > 1:1326484/1‑150 (MQ=255) tCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACg > 1:404075/1‑150 (MQ=255) tCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGACAATGTGCTGGAAGACGCATTGCCGCACAAGAACCGCTAGGCTCATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACg > 2:2079412/1‑150 (MQ=255) cAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGa < 1:2327591/150‑1 (MQ=255) cAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGa < 2:1038701/150‑1 (MQ=255) ggggTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGacc > 2:167166/1‑150 (MQ=255) gTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCGGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGaccaac > 1:367443/1‑150 (MQ=255) gTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGaccaac < 1:167166/150‑1 (MQ=255) actcaccCAGTGGCAGATGTGCTACCTGGGCGCCAAAGTGCCGGCGGCGGCCTTGCAGCACCGCTACCGCCATGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCTTCACGACTAGCCAgg < 2:1955041/146‑1 (MQ=255) accaaccCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAgg > 1:994596/1‑150 (MQ=255) ccaaccCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGc > 1:1940137/1‑118 (MQ=255) ccaaccCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGc < 2:1940137/118‑1 (MQ=255) ccaaccCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGc > 1:1712037/1‑150 (MQ=255) aaccCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCAc > 1:995603/1‑150 (MQ=255) accCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACt > 1:1723532/1‑150 (MQ=255) ccAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTgg < 1:2379928/150‑1 (MQ=255) aGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGTAGCgtgt > 2:44042/1‑150 (MQ=255) aGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCgtgt < 2:2016293/150‑1 (MQ=255) cTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCGGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTAt < 2:367443/150‑1 (MQ=255) cTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTAt > 2:808483/1‑150 (MQ=255) tgCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAAACAGGCACTGGCAGCGTGTATTTc > 2:309281/1‑150 (MQ=255) tACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCt > 1:2091246/1‑150 (MQ=255) tGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCa > 2:102940/1‑109 (MQ=255) tGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCa < 1:102940/109‑1 (MQ=255) gcgcCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTAGCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGaccaacca > 1:1952371/1‑119 (MQ=255) gcgcCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGaccaacca < 2:1952371/119‑1 (MQ=255) cgcCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTa < 2:1947053/150‑1 (MQ=255) cgcCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTa < 2:1580277/150‑1 (MQ=255) gtgCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTgcag < 2:2327103/150‑1 (MQ=255) ggcggcCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TGCAGTAGGTGCAGCATGa > 2:739428/1‑150 (MQ=255) cggcCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAgc < 2:1625054/150‑1 (MQ=255) cggcCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAgc < 2:455322/150‑1 (MQ=255) gccgccTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAgcgg < 2:37255/150‑1 (MQ=255) ccgccTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAgcggc > 1:1707268/1‑150 (MQ=255) cgccTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTAt > 2:18302/1‑118 (MQ=255) cgccTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAgcggcg > 2:649306/1‑150 (MQ=255) cgccTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGAGTCAAGCCGGCGGCCAGCACGACCACCCAGTCACTTGCACCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAgcggct > 2:272078/1‑149 (MQ=255) cTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCAt < 1:2169508/139‑1 (MQ=255) cTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCAt > 2:2169508/1‑139 (MQ=255) cTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCa > 1:578419/1‑150 (MQ=255) tGCAGCACCGCTACCGCCAGTCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAgg < 1:736692/150‑1 (MQ=255) gcagcaCCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAAACAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAggg < 1:309281/150‑1 (MQ=255) gcaCCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGa > 2:2046195/1‑84 (MQ=255) gcaCCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGa < 1:2046195/84‑1 (MQ=255) gcaCCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTAc > 1:1989011/1‑150 (MQ=255) gcaCCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCAAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTAc > 2:1204700/1‑150 (MQ=255) aCNGCTACCGCCAGGCTTATGCCGGCCNTTTCCACCTGGCNTCGCCANGNCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTg > 1:1625009/1‑150 (MQ=255) aCCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGTTACt > 1:1909931/1‑149 (MQ=255) aCCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACt < 2:1909931/149‑1 (MQ=255) cGCTACCGCCCGGATTACGCCTGCATTAGCCACCATGCTGCTCCAGGCCCAGCACAGCGTCAAGCCTTTCCCCAGCACGACCAACCAGGCACTGGTAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGAt < 1:44042/150‑1 (MQ=255) cGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGAt < 1:1613467/150‑1 (MQ=255) cGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGAt > 2:1613467/1‑150 (MQ=255) aCCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTc < 2:1326484/150‑1 (MQ=255) ccGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCa < 2:2091246/150‑1 (MQ=255) ccGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCa < 2:995603/150‑1 (MQ=255) cGCCAGGCTTATGCCGGCCTTTTCCACCTTGCGTCGCCAGTCCCAGCACAGCCTCAAGCCGGCGGCCAGCACGCCAAACCCAG‑ACCACGTGGATGGATGTCAGTGACGCGCTGTGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAg < 1:657311/150‑1 (MQ=255) cGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAg < 1:1533395/150‑1 (MQ=255) ggCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTg < 2:728395/112‑1 (MQ=255) ggCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTg > 1:728395/1‑112 (MQ=255) aTGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAgcg < 2:258420/118‑1 (MQ=255) aTGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAgcg > 1:258420/1‑118 (MQ=255) ccGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAgcg > 1:190812/1‑115 (MQ=255) ccGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAgcg < 2:190812/115‑1 (MQ=255) ccGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATAcc > 2:1401221/1‑150 (MQ=255) cGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAgg > 2:538875/1‑122 (MQ=255) cGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGc > 1:1970825/1‑138 (MQ=255) gCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGgcgc > 1:1579782/1‑116 (MQ=255) gCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGgcgc < 2:1579782/116‑1 (MQ=255) gCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCg < 2:404075/150‑1 (MQ=255) ccTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGt > 1:2409358/1‑150 (MQ=255) ccTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGt < 1:37115/150‑1 (MQ=255) cTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGt < 2:2196691/98‑1 (MQ=255) cTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGt > 1:2196691/1‑98 (MQ=255) cTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTa < 2:2409358/150‑1 (MQ=255) ttttCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTAc > 1:1614002/1‑150 (MQ=255) tgggccTGGCGACGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTCAAGGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTACAGc > 1:1234309/5‑150 (MQ=255) ggccTGGCGACGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTACAGCAc > 2:2231982/3‑150 (MQ=255) aCCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTACAGCACg > 1:861747/1‑150 (MQ=255) aCCGGGCGTCGCCAGGCCCAGGACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTACAGCAcn < 2:1625009/150‑2 (MQ=255) cTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTACAGCACGGt > 1:1927091/1‑150 (MQ=255) gCGACGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTACAGCACGGtcat > 2:2383998/1‑150 (MQ=255) cGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTACAGCACGGtcatc < 1:2079412/150‑1 (MQ=255) gTCGCCAGGCCCAGCACCGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTACAGCACGGtcatca > 2:216762/1‑150 (MQ=255) | GTGCCCTGGGTGATCACATGCCCGAGCCGCGCGGTGTTGTCAGGGGTGAACCAACCCAGTGGCAGCTGTGCTACCTGGGCGCCAATGTGCTGGCGGCCGCCTTGCAGCACCGCTACCGCCAGGCTTATGCCGGCCTTTTCCACCTGGCGTCGCCAGGCCCAGCACAGCGTCAAGCCGGCGGCCAGCACGACCAACCAGGCACTGGCAGCGTGTATTTCGCTG‑TTCAGTAGGTGCAGCATGAGCGGCGCCAGGGTACTGATGGTCAGGCCACTGAATACCCCGTACAGCACGGTCATCA > NC_002947/2966311‑2966608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |