Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 268,744 | T→A | 7.2% | intergenic (‑75/+25) | PP_0216 ← / ← desA | sensory box/GGDEF family protein/delta‑9 fatty acid desaturase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 268,744 | 0 | T | A | 7.2% | 201.0 / 6.8 | 70 | intergenic (‑75/+25) | PP_0216/desA | sensory box/GGDEF family protein/delta‑9 fatty acid desaturase |
Reads supporting (aligned to +/- strand): ref base T (30/35); new base A (2/3); total (32/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.13e-01 |
CGGGGAAAATCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGTCGTGG > NC_002947/268597‑268889 | cGGGGAAAATCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTgg < 1:78017/150‑1 (MQ=255) gggAAAATCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTgggg < 1:335042/150‑1 (MQ=255) gtaaaaTCGTTGGAAGGTTCTCGGCCAGGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTggggg < 2:627079/148‑1 (MQ=255) aaTCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGt > 2:2204597/1‑150 (MQ=255) aaTCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCCCAGCGGGGCGt < 2:2003438/150‑1 (MQ=255) aaTCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCCCAGCGGGGCGt < 1:2013277/150‑1 (MQ=255) tGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGATAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGAt > 2:1744444/1‑150 (MQ=255) gAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCa > 1:1471491/1‑150 (MQ=255) ttCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAAcggc > 2:1847021/1‑150 (MQ=255) ttCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAAcggc > 2:1846866/1‑150 (MQ=255) tCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAAcggcg < 1:1106107/150‑1 (MQ=255) tCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAAcggcg < 1:1643751/150‑1 (MQ=255) gtgCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGcc < 1:13479/150‑1 (MQ=255) tgCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCg < 1:1923321/150‑1 (MQ=255) cACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGa > 1:204543/1‑128 (MQ=255) cACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGa < 2:204543/128‑1 (MQ=255) cACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGt > 2:648696/1‑150 (MQ=255) aCGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTggg < 1:537501/116‑1 (MQ=255) aCGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTggg > 2:537501/1‑116 (MQ=255) tcagcAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCAAGGAGGTGATATTCCGGATTCGAGTGGAGAGGGCGCGTCGAAGTTCCGAATGCCACGCCCCGCTGGGGGGCGTGCCGATCAGCGGCGGTCAGGCGCCGGTCGGGCGCAGc < 1:772591/146‑1 (MQ=255) gtttcAACGGGAAAGCGTGCGGCCAGCAACCGGTCCGTCACGCAGGCGATATTCGGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAAGGGCAGGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGGGCCGGTCGGGCGCAGc < 2:1046129/147‑1 (MQ=255) gTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGCGGTGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGc > 1:162728/1‑150 (MQ=255) tctcAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGGAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCg > 2:548906/1‑150 (MQ=255) tctcAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCggg > 1:1803406/1‑143 (MQ=255) tctcAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCggg < 2:1803406/143‑1 (MQ=255) tctcAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCg > 1:1637425/1‑150 (MQ=255) ctcAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGa < 1:2204597/150‑1 (MQ=255) aCGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTaa < 1:1847021/150‑1 (MQ=255) aCGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTaa > 1:756715/1‑150 (MQ=255) aCGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTaa < 1:1846866/150‑1 (MQ=255) gTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGt < 1:1837642/150‑1 (MQ=255) aGCGTGCGGCCCGCATCCGGGCTGCCACTAATGCGATATTCCGGTTTCGAGTGGAGAGGTGCGGGCGAAGTTCCGATTTGGACGCCCCGCTTGGGGGCGTGGCGAGCAACGGCGTTCAGGCGTCGGTCTGGCGCAGCGAGTAAGTCTTGa < 2:1136923/150‑1 (MQ=255) aGCGTGCGGCCAGCATCCGGCCCGCCACACAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGa > 1:768557/1‑150 (MQ=255) aGCGTGCGGCCAGCATCCGGCCCGCCACACAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGa < 2:768557/150‑1 (MQ=255) gCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGGAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTtgt < 1:548906/150‑1 (MQ=255) ccAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATGCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGACGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGtgctg > 1:1952852/1‑150 (MQ=255) cGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTcg < 1:1707175/150‑1 (MQ=255) gCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTcgcg < 2:604146/150‑1 (MQ=255) ccGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCa > 1:1996264/1‑150 (MQ=255) gCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGt < 1:2408793/150‑1 (MQ=255) ccACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGGGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTg > 1:2298429/1‑150 (MQ=255) cGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCt < 1:2319085/150‑1 (MQ=255) ggCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGAt < 1:1716531/150‑1 (MQ=255) gCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCGCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATg > 2:944889/1‑150 (MQ=255) ttCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTg < 1:648696/150‑1 (MQ=255) ttCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTg > 2:1030606/1‑150 (MQ=255) ccGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGt < 2:2097381/150‑1 (MQ=255) cGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGtt > 1:1560465/1‑150 (MQ=255) gATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTc < 2:1780270/150‑1 (MQ=255) tCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGc < 1:1744444/150‑1 (MQ=255) tCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGc < 2:2298429/150‑1 (MQ=255) tGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCAt > 1:1822485/1‑150 (MQ=255) gagaGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGt > 1:1985707/1‑150 (MQ=255) agGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTAcc > 1:1412384/1‑150 (MQ=255) gTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCa < 2:1985707/150‑1 (MQ=255) tGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAg < 1:192915/150‑1 (MQ=255) gggggCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGt > 2:1321765/1‑150 (MQ=255) gggCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCt < 1:1790076/150‑1 (MQ=255) gAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCt < 1:381248/132‑1 (MQ=255) gAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCt > 2:381248/1‑132 (MQ=255) tcggCACGCCCCCCAGCGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAg > 1:1205354/3‑150 (MQ=255) tGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGc < 1:1050052/150‑1 (MQ=255) gCACGCCCCGCTGGGGGGCGTGCCGATCCAGGGCCGGCCGGCGCGGTGTGTGGGTAGCGAGTCAGTCTTGAGCTGAAGAGCACACGTC‑TGAACTCCCGTGATGCCGCTGGTTTCGGGCTCATGTACCGAGTCGTTCATGTCTGCGAgggg > 1:1151080/1‑147 (MQ=255) gCACGCCCCCCAGCGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCa < 2:327024/137‑1 (MQ=255) gCACGCCCCCCAGCGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCa > 1:327024/1‑137 (MQ=255) aCGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGt < 2:1471491/150‑1 (MQ=255) aCGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGt > 2:1429555/1‑150 (MQ=255) cccGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTTGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGTCGTg > 2:225129/1‑150 (MQ=255) cccGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGTCGTg > 2:554539/1‑150 (MQ=255) ccGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCAGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGTCGTgg > 2:299057/1‑150 (MQ=255) | CGGGGAAAATCGTTGGAATGTTCTTGGCCATGTGCACGGAGCAGGTCTCAACGTGAAAGCGTGCGGCCAGCATCCGGCCCGCCACGCAGGCGATATTCCGGATTCGAGTGGAGAGGTGGGGGCGAAGTTCCGAATGGCACGCCCCGCTGGGGGGCGTGCCGATCAACGGCGGTCAGGCGCCGGTCGGGCGCAGCGAGTAAGTCTTGAGTTGTGCTGC‑GAAGTCGCGCAGTGCCTGGATGCCGCTGGTTTCGGCCTCATGTACCCAGTCTTTCATGGCTGCCAGCATGTCGTGG > NC_002947/268597‑268889 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |