Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,007,720 | C→A | 5.5% | S473I (AGC→ATC) | PP_2628 ← | ABC transporter ATP‑binding protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,007,720 | 0 | C | A | 5.5% | 291.5 / 2.8 | 89 | S473I (AGC→ATC) | PP_2628 | ABC transporter ATP‑binding protein |
Reads supporting (aligned to +/- strand): ref base C (44/40); new base A (2/3); total (46/43) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
ATGAAACCATCGGCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAGGCCGACTTTTTCGCCCGGACGAATGTG > NC_002947/3007576‑3007868 | atgaAACCATCGGCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATcc > 1:2220068/1‑150 (MQ=255) aaCCATCGGCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCg > 1:2003882/1‑150 (MQ=255) aCCATCGGCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTCGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGt < 1:758582/150‑1 (MQ=255) cATCGGCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGa > 2:1221038/1‑150 (MQ=255) cATCGGCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTACGTGa > 2:1794551/1‑150 (MQ=255) aTCGGCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGGAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATACCGATGGAGCTGCGCACTCTATGCttgctgac > 2:1123850/1‑143 (MQ=255) aTCGGCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGATAGCCTGCgcagc < 1:850155/150‑5 (MQ=255) gCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCttc > 2:1210254/1‑149 (MQ=255) gCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTg < 2:1247561/150‑1 (MQ=255) ccTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGATCTTgg < 2:94055/150‑1 (MQ=255) cTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGc > 2:727485/1‑150 (MQ=255) tGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCg > 2:2235286/1‑150 (MQ=255) tGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCg > 2:865289/1‑150 (MQ=255) aCTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGc > 1:2250456/1‑144 (MQ=255) aCTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGc < 2:2250456/144‑1 (MQ=255) cTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTc < 2:1963236/150‑1 (MQ=255) tGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGAc > 1:569416/1‑136 (MQ=255) tGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGAc < 2:569416/136‑1 (MQ=255) ccGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGcc < 1:1296193/150‑1 (MQ=255) cGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCg > 1:907531/1‑128 (MQ=255) cGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCg < 2:907531/128‑1 (MQ=255) gCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCg > 2:294597/1‑150 (MQ=255) aCGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCg > 2:1388234/1‑150 (MQ=255) cGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTgg > 2:243450/1‑127 (MQ=255) cGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTgg < 1:243450/127‑1 (MQ=255) ggATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTa < 1:1388234/150‑1 (MQ=255) aTCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTAtt > 1:808377/1‑150 (MQ=255) cTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGACGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTc < 2:1094597/150‑1 (MQ=255) tgtgCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGATGCGCAGGCTATTCTGCCTGACCGGGGTGGCGATCTGTGCGGGGATGCGTATTTcc < 2:25278/150‑1 (MQ=37) gtgCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTccc > 1:1425438/1‑150 (MQ=255) tgCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTcccc < 2:1165809/150‑1 (MQ=255) tgCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTcccc > 1:992916/1‑150 (MQ=255) tCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTg < 2:1553788/150‑1 (MQ=255) ggTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTc < 2:1786744/150‑1 (MQ=255) cATCGGGGCGGCCATATGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCAcgt < 1:1243827/150‑1 (MQ=255) gcggcCATAGGCAATATTGTCGCGTAAGCATCGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGaa < 1:611768/150‑1 (MQ=255) gcggcCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGaa < 1:517766/150‑1 (MQ=255) cATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGt < 2:1012874/111‑1 (MQ=255) cATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGt > 1:1012874/1‑111 (MQ=255) cATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCgca > 2:1968178/1‑150 (MQ=255) cATAGGCAATATTGTCGCGAATAGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGt < 2:202965/111‑1 (MQ=255) cATAGGCAATATTGTCGCGAATAGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGt > 1:202965/1‑111 (MQ=255) tAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCgcagc > 1:152961/1‑150 (MQ=255) cAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGAACATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCgcagcagca > 1:970987/1‑150 (MQ=255) aaTATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGcagcagcag > 1:2262959/1‑150 (MQ=255) atTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGtt < 2:152961/150‑1 (MQ=255) tCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGAGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCACCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATc > 1:20080/1‑150 (MQ=255) gcgAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGt < 2:528824/95‑1 (MQ=255) gcgAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGt > 1:528824/1‑95 (MQ=255) cgAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTgg > 2:127497/1‑79 (MQ=255) cgAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTgg < 1:127497/79‑1 (MQ=255) cgAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAg > 2:697200/1‑150 (MQ=255) gAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAgg < 1:727485/150‑1 (MQ=255) aaTCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGt > 2:1570468/1‑150 (MQ=255) gAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCTTCGTTCTGCCTGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGAc < 1:294597/150‑1 (MQ=255) aaCGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACt < 1:697200/150‑1 (MQ=255) gCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCgg < 2:2003882/150‑1 (MQ=255) aaCAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGgcg > 1:89178/1‑150 (MQ=255) cAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGaa < 2:1405583/111‑1 (MQ=255) cAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGaa > 1:1405583/1‑111 (MQ=255) aGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCg > 2:156861/1‑150 (MQ=255) aGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCg > 2:668207/1‑150 (MQ=255) tgtCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGc < 2:808377/150‑1 (MQ=255) tCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCg > 1:720484/1‑150 (MQ=255) tCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCg > 1:1969769/1‑150 (MQ=255) cTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTcccc < 1:741450/81‑1 (MQ=255) cTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTcccc > 2:741450/1‑81 (MQ=255) gAGTGACCATCCCCATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGTCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCa < 1:1123850/150‑1 (MQ=255) aGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGTCCGACCAg > 2:1869385/1‑150 (MQ=255) gTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAgg < 2:453893/150‑1 (MQ=255) tGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCaa > 2:161988/1‑115 (MQ=255) tGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCaa < 1:161988/115‑1 (MQ=255) gACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAGGcc < 1:1030302/150‑1 (MQ=255) ccATGCCGATGGCGCTGTGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAGGCCGa > 2:912635/1‑150 (MQ=255) cATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAGGCCGAc < 1:650836/150‑1 (MQ=255) cATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAAGCCGAc > 2:242995/1‑150 (MQ=255) aTGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAGGCCGACt > 1:393376/1‑150 (MQ=255) ccGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGTGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCg < 1:2377232/131‑1 (MQ=255) ccGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGTGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCg > 2:2377232/1‑131 (MQ=255) gATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTTGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGATCGGCCGACCAGGCCGACTTTTTc < 2:89178/150‑1 (MQ=255) gATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAGGCCGACTTTTTc < 1:2109065/150‑1 (MQ=255) gcgcTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAGGCCGACTTTTTCGccc < 2:2262959/150‑1 (MQ=255) gcTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAgg > 1:1785581/1‑101 (MQ=255) gcTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAgg < 2:1785581/101‑1 (MQ=255) cacgcAGGATAGCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCa > 2:1054219/3‑129 (MQ=255) cacgcAGGATAGCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCa < 1:1054219/127‑1 (MQ=255) acgcAGGATAGCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCCGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCa > 1:1571309/2‑128 (MQ=255) acgcAGGATAGCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCa < 2:1571309/127‑1 (MQ=255) gCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAGGCCGACTTTTTCGCCCGGACGAAtgtg > 2:1857278/1‑150 (MQ=255) | ATGAAACCATCGGCCTGGGCACTGGCCGCAGCGGCACGGATCTGTGCTTCGGTAGCATCGGGGCGGCCATAGGCAATATTGTCGCGAATCGAACGGTGCAACAGCGAGGTGTCCTGAGTGACCATGCCGATGGCGCTGCGCAGGCTATCCTGCGTGACCTTGGCGACGTTCTGCCCGTCGATGCGTATTTCCCCCTTGTCCACGTCGTAGAAGCGCAGCAGCAGGTTGATCAAGGTGGACTTGCCGGCGCCGGAGCGGCCGACCAGGCCGACTTTTTCGCCCGGACGAATGTG > NC_002947/3007576‑3007868 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |