| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,030,456 | C→G | 6.0% | intergenic (+413/‑281) | pcaY → / → mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,030,456 | 0 | C | G | 6.0% | 399.7 / 10.9 | 128 | intergenic (+413/‑281) | pcaY/mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base C (54/64); new base G (3/5); total (57/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 136 total aligned reads displayed.
GCCGCCGCCGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGG > NC_002947/3030310‑3030605 | gccgccgccGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCaa < 2:1725714/150‑1 (MQ=255)gccgccgccGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCaa < 1:949379/150‑1 (MQ=255) ccgccgccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAag < 1:1280911/150‑1 (MQ=255) cgccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAagtagt > 1:1939238/1‑150 (MQ=255) gccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGtt > 2:513000/1‑150 (MQ=255) cgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCACGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGc > 1:1525833/1‑150 (MQ=255) gtgtTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTGATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTAACTTGACCACCACCAGCACCCCCCGAGTAGTTGCgg < 2:475461/150‑1 (MQ=255) tgtTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCggg < 1:476963/150‑1 (MQ=255) gtTGGCCGCTTGGAGCCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCTAGCCTGCGAGCTGTGCGCCGCGG‑CAGCACCGCGCCTGGCCGCGGCGTCTGCCCGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCgggg < 1:1977140/150‑1 (MQ=255) ggCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACTACTTGGGGGGTGc < 2:1035360/150‑1 (MQ=255) ggCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGc > 1:229602/1‑150 (MQ=255) cGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTATGGCAGCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACTACTTGGGGGGTGCTgg < 1:635100/150‑1 (MQ=255) tttctaGGCACGCTCATTAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACCGTNACCTTGACCTCCACCCTCACCCCGCAACTACTTGGGGGGTGCTggtg < 1:936631/145‑3 (MQ=255) gTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCGCCAGCACCCCGCAACTACTTGGGGGGTGCTggtg < 2:2105672/150‑3 (MQ=39) gAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTc > 1:1183545/1‑150 (MQ=255) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCAt > 2:1140642/1‑150 (MQ=255) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCAt < 1:673427/150‑1 (MQ=255) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCAt > 2:677401/1‑150 (MQ=255) cTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCATGCTTGCCTTGTGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCa < 2:1171741/150‑1 (MQ=255) aTGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGCCGCGTCTTCATGGACGc > 1:1416889/1‑150 (MQ=255) gAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTCGTCGTGGTGTTCTGGCGCGTCTTCATGCACGCtt < 1:1862610/150‑1 (MQ=255) gAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCtt < 1:2119713/150‑1 (MQ=255) gAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCtt > 2:1159061/1‑150 (MQ=255) aaCCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTg > 2:1862610/1‑150 (MQ=255) aCCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGa > 1:1989697/1‑150 (MQ=255) cTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCAccccc < 1:1551534/106‑1 (MQ=255) cTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCAccccc > 2:1551534/1‑106 (MQ=255) cTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGc > 2:1821113/1‑150 (MQ=255) aCTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCGTGACACCCAAACGCGTCTTATCCGGCATCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGcccc > 1:781829/1‑150 (MQ=255) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCGCCAGCACCCCGCAACTACTTGGGGGGTGCTggtggtgg < 2:626352/129‑7 (MQ=37) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCGCCAGCACCCCGCAACTACTTGGGGGGTGCTggtggtgg > 1:626352/1‑123 (MQ=37) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccccc < 1:359750/150‑1 (MQ=255) tttCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTtctc > 2:551834/1‑150 (MQ=255) tCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCAc < 1:1764507/150‑1 (MQ=255) tCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCAc < 1:1359960/150‑1 (MQ=255) tCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCAc < 1:886313/150‑1 (MQ=255) cacaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt < 1:183424/150‑1 (MQ=255) cacaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt < 1:204605/150‑1 (MQ=255) tCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCaa < 2:1178510/89‑1 (MQ=255) tCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCaa > 1:1178510/1‑89 (MQ=255) ccAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCaa < 1:2342533/86‑1 (MQ=255) ccAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCaa > 2:2342533/1‑86 (MQ=255) cAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGAGCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGc > 2:1731848/1‑120 (MQ=255) aGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAg > 2:930344/1‑150 (MQ=255) gCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGa < 2:1442981/150‑1 (MQ=255) tGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGatat < 2:1701984/150‑1 (MQ=255) tGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGaa < 2:904674/150‑1 (MQ=255) ccTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACg < 1:1054195/150‑1 (MQ=255) cTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACgg > 2:238483/1‑150 (MQ=255) ttGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGt > 1:1927443/1‑150 (MQ=255) tGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTAt < 2:556983/150‑1 (MQ=255) gccgcGGCCAGGCGCGGGCCT‑GCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCt > 1:718551/1‑150 (MQ=255) gccgcGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGaa < 1:322092/142‑1 (MQ=255) gccgcGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGaa > 2:322092/1‑142 (MQ=255) gccgcGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAAc > 2:863522/1‑143 (MQ=255) gccgcGG‑CAGGCCCGCGCCTGGCCGAGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCt > 1:1966408/1‑150 (MQ=255) gcgG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTtctc < 2:1278288/119‑1 (MQ=255) gg‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTg < 2:2255908/135‑1 (MQ=255) aGGTCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAATTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGACCGGTATCTTTGTACTc < 2:2206546/150‑1 (MQ=255) aGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTc > 1:322402/1‑150 (MQ=255) cccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGaa > 2:545256/1‑150 (MQ=255) cccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGaa < 2:322402/150‑1 (MQ=255) ccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAAc > 2:242378/1‑150 (MQ=255) ccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGCTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccc > 1:230478/1‑99 (MQ=255) ccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGCTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccc < 2:230478/99‑1 (MQ=255) cgcgCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCgg > 1:347512/1‑65 (MQ=255) cTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTc < 1:1939663/77‑1 (MQ=255) cTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTc > 2:1939663/1‑77 (MQ=255) tGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCAt < 1:1159061/150‑1 (MQ=255) gCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGt < 1:2391535/150‑1 (MQ=255) gCCGCGGCGTCTGCACGGCTAACATGCCCCCACCCCCCACCTCTCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGt < 2:633410/150‑1 (MQ=255) gcggcgTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaa < 1:545256/150‑1 (MQ=255) gTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGaa < 2:184659/99‑1 (MQ=255) gCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCCCTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcgcg < 2:1183545/150‑1 (MQ=255) gCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcgcg < 2:109225/150‑1 (MQ=255) cTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACttt < 2:878567/126‑1 (MQ=255) cTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACttt > 1:878567/1‑126 (MQ=255) cTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATAtt < 2:2155004/96‑1 (MQ=255) cTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATAtt > 1:2155004/1‑96 (MQ=255) ttGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTg > 1:1932641/1‑109 (MQ=255) ttGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTg < 2:1932641/109‑1 (MQ=255) ttGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTg < 2:1931923/109‑1 (MQ=255) gACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTc > 2:87855/1‑150 (MQ=255) caccaccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAGAGTTCGCGGGATAACTATTTCCCt < 2:203734/150‑1 (MQ=255) caccaccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt > 2:1406139/1‑150 (MQ=255) caccaccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt < 1:2206935/150‑1 (MQ=255) caccaccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt < 1:513000/150‑1 (MQ=255) accaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTgtgt < 1:1655623/150‑1 (MQ=255) gCACCCCGCAACTACTTGGGGGGTGCTGGTGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTAt > 2:2059004/1‑150 (MQ=255) gCACCCCCCAAGTAGTTGCGGGGTGAAGGAACGTCATTTTGGACGCGTGAGCCCCCGCACTTCTCACTGAAAGAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTAt < 1:1140642/150‑1 (MQ=255) cACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTCGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATg > 1:2348526/1‑150 (MQ=255) aCCCCGCAACTACTTTGGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGa > 2:1609407/1‑150 (MQ=255) aCCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGatat > 1:1251041/1‑79 (MQ=255) aCCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAAc < 1:2257122/84‑1 (MQ=255) aCCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAAc > 2:2257122/1‑84 (MQ=255) cccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCATGTGCATATGaaa > 1:723300/1‑150 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaaa < 1:2084051/150‑1 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaaa > 1:413869/1‑150 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaaa < 2:2324748/150‑1 (MQ=255) ccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAgg > 1:1862239/1‑150 (MQ=255) | GCCGCCGCCGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGG > NC_002947/3030310‑3030605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |