| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,030,463 | G→C | 6.0% | intergenic (+420/‑274) | pcaY → / → mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,030,463 | 0 | G | C | 6.0% | 423.1 / 12.1 | 131 | intergenic (+420/‑274) | pcaY/mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base G (56/66); new base C (3/5); total (59/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 133 total aligned reads displayed.
CGCCGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAAT > NC_002947/3030315‑3030608 | cgccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAagtagt > 1:1939238/1‑150 (MQ=255) gccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGtt > 2:513000/1‑150 (MQ=255) cgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCACGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGc > 1:1525833/1‑150 (MQ=255) gtgtTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTGATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTAACTTGACCACCA‑CCAGCA‑CCCCCCGAGTAGTTGCgg < 2:475461/150‑1 (MQ=255) tgtTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCggg < 1:476963/150‑1 (MQ=255) gtTGGCCGCTTGGAGCCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCTAGCCTGCGAGCTGTGCGCCGCGG‑CAGCACCGCGCCTGGCCGCGGCGTCTGCCCGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCgggg < 1:1977140/150‑1 (MQ=255) ggCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCGCAACTACTTGGGGGGTGc < 2:1035360/150‑1 (MQ=255) gCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCTG‑CAGGCCCGAGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCt > 2:886313/1‑150 (MQ=255) cGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTATGGCAGCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCGCAACTACTTGGGGGGTGCTgg < 1:635100/150‑1 (MQ=255) tttctaGGCACGCTCATTAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACCGTNACCTTGACCTCCA‑CCCTCA‑CCCCGCAACTACTTGGGGGGTGCTggtg < 1:936631/145‑3 (MQ=255) gTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCG‑CCAGCA‑CCCCGCAACTACTTGGGGGGTGCTggtg < 2:2105672/150‑3 (MQ=39) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCAt > 2:1140642/1‑150 (MQ=255) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCAt > 2:677401/1‑150 (MQ=255) gCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGc > 2:2391535/1‑150 (MQ=255) cTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCATGCTTGCCTTGTGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCa < 2:1171741/150‑1 (MQ=255) gAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTCGTCGTGGTGTTCTGGCGCGTCTTCATGCACGCtt < 1:1862610/150‑1 (MQ=255) gAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCtt > 2:1159061/1‑150 (MQ=255) gAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCtt < 1:2119713/150‑1 (MQ=255) aaCCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTg > 2:1862610/1‑150 (MQ=255) aCCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGa > 1:1989697/1‑150 (MQ=255) ccTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAg > 1:1943726/1‑150 (MQ=255) cTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGc > 2:1821113/1‑150 (MQ=255) aCTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCGTGACACCCAAACGCGTCTTAT‑CCGGCA‑TCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGcccc > 1:781829/1‑150 (MQ=255) aCTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCACGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGcccc > 1:1161098/1‑150 (MQ=255) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCG‑CCAGCA‑CCCCGCAACTACTTGGGGGGTGCTggtggtgg > 1:626352/1‑123 (MQ=37) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCG‑CCAGCA‑CCCCGCAACTACTTGGGGGGTGCTggtggtgg < 2:626352/129‑7 (MQ=37) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccccc > 1:1442981/1‑150 (MQ=255) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccccc < 1:359750/150‑1 (MQ=255) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccccc < 1:351320/150‑1 (MQ=255) ttCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCg > 2:2324725/1‑150 (MQ=255) gTTTCACATCGCCAGGCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCTGCGGCGTCTGGACGGCTACCTTGACCACCA‑CCAGCC‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGTGCCCCCGCACTtct < 2:1651673/150‑1 (MQ=255) tttCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTtctc > 2:551834/1‑150 (MQ=255) ttCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCa < 1:417048/150‑1 (MQ=255) tCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCAc < 1:1764507/150‑1 (MQ=255) tCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCAc < 1:1359960/150‑1 (MQ=255) cacaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt < 1:183424/150‑1 (MQ=255) aTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGaa > 1:203734/1‑150 (MQ=255) ccAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATaaa > 2:2206935/1‑150 (MQ=255) cAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGAGCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGc > 2:1731848/1‑120 (MQ=255) aGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAg > 2:930344/1‑150 (MQ=255) gCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGa < 2:1442981/150‑1 (MQ=255) tGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGatat < 2:1701984/150‑1 (MQ=255) tGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGaa < 2:904674/150‑1 (MQ=255) ccTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACg < 1:1054195/150‑1 (MQ=255) ttGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGt > 1:1927443/1‑150 (MQ=255) ttGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGt > 2:2084051/1‑150 (MQ=255) tGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑‑CCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTAt < 2:556983/150‑1 (MQ=255) gccgcGGCCAGGCGCGGGCCT‑GCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCt > 1:718551/1‑150 (MQ=255) gccgcGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGaa > 2:322092/1‑142 (MQ=255) gccgcGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGaa < 1:322092/142‑1 (MQ=255) gccgcGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAAc < 1:863522/143‑1 (MQ=255) gccgcGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAAc > 2:863522/1‑143 (MQ=255) cgcgG‑CCGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCCCGATCTAAAAGAACCTGAAACCG‑TG‑TTGGTGCTGGCGGTGCGTCATGCACGCTTGAGCACCCGAACTTCTCACTGAAGAAAAGATATTGAACGGTATCttt < 1:551834/150‑1 (MQ=255) gcgG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTtctc > 1:1278288/1‑119 (MQ=255) gg‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTg < 2:2255908/135‑1 (MQ=255) gg‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTg > 1:2255908/1‑135 (MQ=255) gg‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTa < 2:1989697/150‑1 (MQ=255) cccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGaa > 2:545256/1‑150 (MQ=255) ccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAAc > 2:242378/1‑150 (MQ=255) ccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGCTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccc > 1:230478/1‑99 (MQ=255) ccGCGCCTGGCCACGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAAc < 2:1525833/150‑1 (MQ=255) cgcgCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCgg > 1:347512/1‑65 (MQ=255) cgcgCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCgg < 2:347512/65‑1 (MQ=255) cgcCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACttt < 1:930344/150‑1 (MQ=255) ccTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTc < 1:2324725/150‑1 (MQ=255) cTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTc < 1:1939663/77‑1 (MQ=255) tGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCAt < 1:1159061/150‑1 (MQ=255) gCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGt < 1:2391535/150‑1 (MQ=255) gCCGCGGCGTCTGCACGGCTAACATGCCCCCAC‑CCCCCA‑CCTCTCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGt < 2:633410/150‑1 (MQ=255) gTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGaa < 2:184659/99‑1 (MQ=255) gTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGaa > 1:184659/1‑99 (MQ=255) gCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCCCTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcgcg < 2:1183545/150‑1 (MQ=255) gCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcgcg < 2:109225/150‑1 (MQ=255) cACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCgg < 1:677401/150‑1 (MQ=255) cTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACttt > 1:878567/1‑126 (MQ=255) cTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATaa > 1:2111989/1‑150 (MQ=255) ccTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTa < 1:242378/150‑1 (MQ=255) cTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATAtt < 2:2155004/96‑1 (MQ=255) ttGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTg > 1:1931923/1‑109 (MQ=255) ttGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTg < 2:1932641/109‑1 (MQ=255) ttGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTg < 2:1931923/109‑1 (MQ=255) gACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTc > 2:87855/1‑150 (MQ=255) cacca‑ccaGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAGAGTTCGCGGGATAACTATTTCCCt < 2:203734/150‑1 (MQ=255) cacca‑ccaGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt < 1:513000/150‑1 (MQ=255) cacca‑ccaGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt < 1:2206935/150‑1 (MQ=255) cacca‑ccaGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt > 2:1406139/1‑150 (MQ=255) a‑ccaGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTgtgt < 1:1655623/150‑1 (MQ=255) gCA‑CCCCCCAAGTAGTTGCGGGGTGAAGGAACGTCATTTTGGACGCGTGAGCCCCCGCACTTCTCACTGAAAGAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTAt < 1:1140642/150‑1 (MQ=255) a‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGatat > 1:1251041/1‑79 (MQ=255) a‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGatat < 2:1251041/79‑1 (MQ=255) a‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAAc > 2:2257122/1‑84 (MQ=255) a‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAAc < 1:2257122/84‑1 (MQ=255) cccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCATGTGCATATGaaa > 1:723300/1‑150 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaaa < 2:2324748/150‑1 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaaa < 1:2084051/150‑1 (MQ=255) ctcAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATg > 2:757491/3‑107 (MQ=255) cAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATAtt > 2:233538/1‑74 (MQ=255) cAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATAtt < 1:233538/74‑1 (MQ=255) cAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGa < 2:1939238/150‑1 (MQ=255) aatagaTGCGGGGGCCTGGCGCGTTTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAAt < 2:1943726/148‑1 (MQ=255) | CGCCGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCA‑CCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAAT > NC_002947/3030315‑3030608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |