| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,047,336 | C→G | 5.2% | L16V (CTG→GTG) | PP_2660 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,047,336 | 0 | C | G | 5.2% | 311.4 / 5.1 | 95 | L16V (CTG→GTG) | PP_2660 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (47/43); new base G (3/2); total (50/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
CAGCTAAACCATGCAAGCTCAAGGTGGGCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGTCGCTCGCGGTATCGACCTGTTCGAT > NC_002947/3047190‑3047482 | cAGCTAAACCATGCAAGCTCAAGGTGGGCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTgc < 1:1075836/150‑1 (MQ=255) tAAACCATGCAAGCTCAAGGTGGGCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTCACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGa < 2:1464689/150‑1 (MQ=255) aaCCATGCAAGCTCAAGGTGGGCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAgg > 1:1505787/1‑150 (MQ=255) tCAAGGTGGGCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGtt < 2:331707/150‑1 (MQ=255) aaGGTGGGCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGtttt < 2:1505787/150‑1 (MQ=255) ggCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGTTGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGaa < 1:128229/150‑1 (MQ=255) gCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAg < 2:447907/128‑1 (MQ=255) gCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAg > 1:447907/1‑128 (MQ=255) gCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAAc > 1:2158377/1‑150 (MQ=255) gCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGCTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAAc > 1:1870121/1‑150 (MQ=255) cGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACt > 2:1508510/1‑150 (MQ=255) ttGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTcagcca > 2:1964204/1‑150 (MQ=255) gCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCAtt < 1:1508510/150‑1 (MQ=255) cAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTc < 2:1697728/150‑1 (MQ=255) ttGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAAcc > 2:1249188/1‑150 (MQ=255) tGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACcg > 2:1291271/1‑150 (MQ=255) gCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACcgc < 2:1494575/150‑1 (MQ=255) cAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACcgcg < 2:1957948/150‑1 (MQ=255) aaCACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCGGGTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCgg > 1:2308656/1‑150 (MQ=255) cccGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGAcc > 2:1325179/1‑150 (MQ=255) ccGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTcagc > 2:853703/1‑124 (MQ=255) ccGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTcagc < 1:853703/124‑1 (MQ=255) ggCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGt > 1:1638720/1‑150 (MQ=255) gCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGc > 2:2143698/1‑98 (MQ=255) gCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGc < 1:2143698/98‑1 (MQ=255) gCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGtt > 1:2124150/1‑150 (MQ=255) ttACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACcga < 2:2045720/150‑1 (MQ=255) aCCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACcgacg > 2:1305889/1‑150 (MQ=255) ccTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACcgacga < 2:2124150/150‑1 (MQ=255) ccTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACcgacga < 1:1964204/150‑1 (MQ=255) cTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAg > 1:1008650/1‑84 (MQ=255) cTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAg < 2:1008650/84‑1 (MQ=255) cTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAg > 1:1596338/1‑150 (MQ=255) ttCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAgg > 1:275371/1‑150 (MQ=255) gTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACcgcg > 2:1027529/1‑126 (MQ=255) gTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACcgcg < 1:1027529/126‑1 (MQ=255) tAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGtgctgc < 1:1305889/150‑1 (MQ=255) cctaGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGc > 1:679877/4‑84 (MQ=255) cctaGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGc < 2:679877/81‑1 (MQ=255) cccAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGtt > 2:1535228/1‑123 (MQ=255) cccAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGtt < 1:1535228/123‑1 (MQ=255) cccAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGt > 2:2193967/1‑150 (MQ=255) cccAGGATTAACAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGGATGTGGt > 1:1878426/1‑150 (MQ=255) ccAGGGTTAAAAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGtt > 2:2332346/1‑150 (MQ=255) ccAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGtt > 1:1921748/1‑150 (MQ=255) ccAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGAGGTAGAGCGCGCACTGCGCGAGGTGCAg < 2:59304/72‑1 (MQ=255) ccAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGAGGTAGAGCGCGCACTGCGCGAGGTGCAg > 1:59304/1‑72 (MQ=255) aGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGa > 1:938975/1‑150 (MQ=255) ggATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGaa < 1:1599510/150‑1 (MQ=255) gATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAg < 1:1249188/150‑1 (MQ=255) aTTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAgg < 1:252168/150‑1 (MQ=255) ccAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTAt > 1:1657952/1‑150 (MQ=255) ccAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTAt > 1:822270/1‑150 (MQ=255) ccAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTAt < 1:2039992/150‑1 (MQ=255) ccAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACCGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTAt > 1:1855956/1‑150 (MQ=255) cAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATg > 1:1757174/1‑150 (MQ=255) cgagcgaCGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTc < 2:1246803/75‑1 (MQ=255) cgagcgaCGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTc > 1:1246803/1‑75 (MQ=255) aCGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTgac < 2:822270/150‑1 (MQ=255) gcgTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTgacga < 2:1657952/150‑1 (MQ=255) gtcgtcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTgctgct > 2:2138131/1‑115 (MQ=255) gtcgtcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTgctgct < 1:2138131/115‑1 (MQ=255) tcgtcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCa > 2:1277120/1‑72 (MQ=255) tcgtcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCa < 1:1277120/72‑1 (MQ=255) tcgtcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACcgac < 1:42881/103‑1 (MQ=255) tcgtcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACcgac > 2:42881/1‑103 (MQ=255) cgtcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTAt < 2:2158377/150‑1 (MQ=255) gtcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTgg < 1:1237832/120‑1 (MQ=255) gtcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTgg > 2:1237832/1‑120 (MQ=255) tcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAg < 2:638829/125‑1 (MQ=255) tcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAg > 1:638829/1‑125 (MQ=255) tcTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGt > 2:1325971/1‑150 (MQ=255) cTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAg < 2:1746358/102‑1 (MQ=255) cTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAg > 1:1746358/1‑102 (MQ=255) gATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAg < 1:121994/99‑1 (MQ=255) gATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAg > 2:121994/1‑99 (MQ=255) cTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGtcgctcgc < 1:1325179/150‑1 (MQ=255) tCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGCTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGTCGCTCGCGGt > 2:915756/1‑150 (MQ=255) aGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGtgctgc < 1:1418112/98‑1 (MQ=255) aGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGtgctgc > 2:1418112/1‑98 (MQ=255) gCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTgg < 2:270139/106‑1 (MQ=255) gCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTgg > 1:270139/1‑106 (MQ=255) gTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAAt > 2:949436/1‑99 (MQ=255) gTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAAt < 1:949436/99‑1 (MQ=255) acctcgcgcAGTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGTCGCTCGCGGTATCGACCt > 2:991910/5‑150 (MQ=255) cctcgcgcAGTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGTCGCTCGCGGTATCGAc < 2:1090000/144‑1 (MQ=255) cctcgcgcAGTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGTCGCTCGCGGTATCGAc > 1:1090000/4‑147 (MQ=255) ctcgcgcAGTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGaa < 2:2235015/102‑1 (MQ=255) ctcgcgcAGTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGaa > 1:2235015/3‑104 (MQ=255) agCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGTCGCTCGCGGTATCGACCTGt < 2:1757174/150‑1 (MQ=255) gcgcgcACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGTCGCTCGCGGTATCGACCTGtt > 1:1882811/1‑150 (MQ=255) cgcgcACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCTTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGTCGCTCGCGGTATCGACCTGTTc < 2:1882811/150‑1 (MQ=255) gcACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGtcg < 2:1864440/127‑1 (MQ=255) gcACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGtcg > 1:1864440/1‑127 (MQ=255) gcACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGTCGCTCGCGGTATCGACCTGTTCGAt > 2:27457/1‑150 (MQ=255) | CAGCTAAACCATGCAAGCTCAAGGTGGGCGGGTGTTGCAGCCAGGAAGGTTGCAACACCCGGCCGCGTTACCTTCCGTTAAAGTGTTACCCAGGATTACCAATGCGAGCGACGCGTCGTCTTGATCTGTCAGCGGTAGAGCGCGCACTGCGCGAGGTGCAGGGCCGTTTTGCCGAACTCAGCCAGCATTTCACCGAACCGCGGGACCCGTTTACCGACGAGGTGCTGCTGAATGTGGTTGAAGGCTATGCGCTGATTGACGACTATGTCGCTCGCGGTATCGACCTGTTCGAT > NC_002947/3047190‑3047482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |