| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,048,667 | G→A | 6.8% | intergenic (+79/‑217) | PP_2661 → / → PP_2662 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,048,667 | 0 | G | A | 6.8% | 205.9 / 2.8 | 70 | intergenic (+79/‑217) | PP_2661/PP_2662 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (32/32); new base A (2/3); total (34/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCACCCCACGCC > NC_002947/3048518‑3048810 | ggCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAg > 1:36742/1‑150 (MQ=255) ggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCg > 1:1671094/1‑150 (MQ=255) agcaACCGCACCGTTATGAAATGATCGCTTGATAGCGTGCTTAGGCACTGGCTGCCGGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGACCGCAAGGCGGCCCCggat > 1:1259498/1‑148 (MQ=255) caACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCTTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGttca < 1:110018/150‑1 (MQ=255) aCCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGttcatt < 2:846355/150‑1 (MQ=255) cGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAACGAAAATGCCGACCCTTAGTGCCGGTTTTTTGGGGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGttcattca > 1:285201/1‑150 (MQ=255) gCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCaa > 2:391234/1‑150 (MQ=255) gTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTa < 2:235240/150‑1 (MQ=255) gTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTa < 1:16615/150‑1 (MQ=255) tttgggtaTGCCCGTTTGCCAGCGGTGGCAGGGAGTGGATTCCTGGAGGCAGGAGATCCCGCTAAGATAATGTAATTGGGGCTGGTTTAGAGCGCTTCGCGTGCGAGCAGGCGAAGGGCCGCAAGGCGGCGCCGGTTCATTCAATCGTAt < 2:2337375/143‑1 (MQ=255) tATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTAtt < 2:1498481/150‑1 (MQ=255) cccGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGc < 1:391234/150‑1 (MQ=255) gCTTGCCAGTGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCGAACTCATTCAATCGTATTGATACCCGCCTg < 1:675785/150‑1 (MQ=255) cAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTc > 2:2281007/1‑150 (MQ=255) cACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTcctgc < 2:1646413/141‑1 (MQ=255) cACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTcctgc > 1:1646413/1‑141 (MQ=255) cACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCAt > 1:853004/1‑150 (MQ=255) gCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAggcgg < 2:1826611/92‑1 (MQ=255) gCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAggcgg > 1:1826611/1‑92 (MQ=255) ttcaggAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGtctc < 2:1280601/145‑1 (MQ=255) tcccTGAAGACAGCCGACTCTACTGATATAAAGTAATGTGGTGTGCTTTGCAGCCTCTCGCGGGTCGCCGCCCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGtctc < 1:655242/148‑1 (MQ=255) cTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGaa > 1:598911/1‑150 (MQ=255) tGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAAc > 1:131270/1‑150 (MQ=255) gAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAAcc < 2:1260834/150‑1 (MQ=255) aaGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCCGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCa < 2:2343774/150‑1 (MQ=255) aGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAg < 2:36742/150‑1 (MQ=255) cAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATCGAATCGTATTGAAACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑c < 2:695576/150‑1 (MQ=255) aGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATa > 2:1667209/1‑105 (MQ=255) aGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATa < 1:1667209/105‑1 (MQ=255) tCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTAcc > 2:1957064/1‑150 (MQ=255) aGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCgg < 2:853004/150‑1 (MQ=255) gATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCaa < 1:1809770/138‑1 (MQ=255) gATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCaa > 2:1809770/1‑138 (MQ=255) gATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCggg > 2:230414/1‑150 (MQ=255) tAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGAc < 2:598911/150‑1 (MQ=255) aTGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTcctgc < 1:1763446/104‑1 (MQ=255) aTGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTcctgc > 2:1763446/1‑104 (MQ=255) tGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCa > 2:1250110/1‑136 (MQ=255) tGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCa < 1:1250110/136‑1 (MQ=255) tGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCaa < 1:197420/150‑1 (MQ=255) tgaaccggggCCGCCTTGCGGCCCTTCGCGGGCTCGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGa < 2:2214189/121‑1 (MQ=17) tgaaccggggCCGCCTTGCGGCCCTTCGCGGGCTCGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACAAGGa > 1:2214189/7‑127 (MQ=17) ccggggCCGCCTTGCGGCCCTTCGCGGGCTCGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATaa > 1:977405/3‑109 (MQ=17) ccggggCCGCCTTGCGGCCCTTCGCGGGCTCGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATaa < 2:977405/107‑1 (MQ=17) gggCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCt < 2:1684939/84‑1 (MQ=255) gggCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCt > 1:1684939/1‑84 (MQ=255) ctgctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAg > 1:2310088/1‑126 (MQ=255) ctgctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAg < 2:2310088/126‑1 (MQ=255) ctgctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGcc > 1:430841/1‑150 (MQ=255) tgctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGtctc > 2:571183/1‑107 (MQ=255) tgctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGtctc < 1:571183/107‑1 (MQ=255) ctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTa < 2:1671094/150‑1 (MQ=255) tttGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGa < 2:519498/92‑1 (MQ=255) tttGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGa > 1:519498/1‑92 (MQ=255) aGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCa > 2:814189/1‑116 (MQ=255) aGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCa < 1:814189/116‑1 (MQ=255) gCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCg > 2:1079485/1‑122 (MQ=255) gCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCg < 1:1079485/122‑1 (MQ=255) ccTTCGCGGGCGAGCCCGCGAAGGGCCGAAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGc < 1:1054206/150‑1 (MQ=255) cTTCGCGGGCTCGCCCGCGAAGGGCTGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGcc > 2:1281966/1‑150 (MQ=255) cTTCGCGGGCTCGCCCGCGAAGGGCTGCAAGGCGGCCCCGGGTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGACGGCTCAAGTTCCAAATCACCGGGCCGTACCCTCCCGcc > 2:1397469/1‑150 (MQ=255) cgggctcgCCCGCGAAGGGCTGCAAAGCAGCCCCGATTCATTCAATCGTATTGATACCCGCCTGCCCCTCCTGTCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGGACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCaaa < 1:1609611/143‑1 (MQ=255) cgGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCaaa < 1:230414/150‑1 (MQ=255) tcgCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACt > 1:2348930/3‑150 (MQ=255) tcgCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACAAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACt > 1:623944/3‑150 (MQ=255) ccacgAAGGGCCGAAAGGCGGCCCCGGCTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAACCACTCGcc > 2:150375/4‑150 (MQ=255) ccGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAg > 2:2373248/1‑88 (MQ=255) ccGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAg < 1:2373248/88‑1 (MQ=255) cgcgAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCa > 1:1936014/1‑150 (MQ=255) ccggggCCGCCTTGCGGCCCTGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCAccc < 2:754414/147‑1 (MQ=255) gggCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCACCCCAc > 2:1978084/1‑150 (MQ=255) ccGCAAGGCGGCCCCGGTTCATTCAATNGTATTGATACCCNCCTGCCNCTCCTGCCTGAGCCATAAGTCTCGAACCCGGC‑CCCCCGAAGGCAGCGTGACGAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCCCCACCCCACGcc > 1:1489171/1‑150 (MQ=255) ccGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGATCTCTATGAACT‑GTGCGTCCAAGTCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCACCCCACGcc > 1:1489152/1‑150 (MQ=255) | GGCTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGGGCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGA‑CCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCACCCCACGCC > NC_002947/3048518‑3048810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |