| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,070,500 | T→C | 6.1% | intergenic (+25/‑329) | aldB‑II → / → pqqD‑II | aldehyde dehydrogenase/coenzyme PQQ synthesis protein D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,070,500 | 0 | T | C | 6.1% | 400.3 / 9.3 | 135 | intergenic (+25/‑329) | aldB‑II/pqqD‑II | aldehyde dehydrogenase/coenzyme PQQ synthesis protein D |
| Reads supporting (aligned to +/- strand): ref base T (64/60); new base C (4/4); total (68/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
Only 100 of 136 total aligned reads displayed.
GGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTCCG > NC_002947/3070352‑3070648 | ggCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTG > 2:2261358‑M1/1‑150 (MQ=255) gCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGC < 1:2304944‑M1/150‑1 (MQ=255) gggggTACAAGAAGTCCGGTGTTTGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCAAGCCCGCgaa < 1:212113‑M1/150‑4 (MQ=255) ggggTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACTATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCAAGCCCGCgaag < 1:437058‑M1/150‑5 (MQ=255) ggggTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTccc < 2:1065469/150‑1 (MQ=255) gTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCcaca > 1:2157696/1‑150 (MQ=255) gTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCcaca > 1:136700/1‑150 (MQ=255) gTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCaaca < 2:2154335/150‑1 (MQ=255) tACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGACGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAg < 2:2244841/150‑1 (MQ=255) tCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGc > 1:583770/1‑150 (MQ=255) cGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGC < 2:87767‑M1/127‑1 (MQ=255) cGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGC > 1:87767‑M1/1‑127 (MQ=255) tGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCa < 1:1876423/150‑1 (MQ=255) gCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGa > 1:130000/1‑150 (MQ=255) gTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCa > 1:37668/1‑145 (MQ=255) gTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAAcc > 2:2008434/1‑150 (MQ=255) gaCCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTg > 2:2239824/1‑150 (MQ=255) ccACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTcc < 2:256363/116‑1 (MQ=255) ccACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTgaag > 1:2003519/1‑150 (MQ=255) ccACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGC < 1:844339‑M1/109‑1 (MQ=255) ccACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGC > 2:844339‑M1/1‑109 (MQ=255) ccACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGC > 2:844136‑M1/1‑109 (MQ=255) cacaAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCCCTTTTGCGGGCTCGCCCGCccccacaggttcttcaccggttctggaaccagcggt > 1:2353510‑M1/1‑114 (MQ=255) cacaAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAgg < 1:1575657/121‑1 (MQ=255) cacaAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAgg > 2:1575657/1‑121 (MQ=255) cacaAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTgaaga > 2:595885/1‑150 (MQ=255) cacaAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTgaaga > 1:303968/1‑150 (MQ=255) acaAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTc > 2:12160/1‑134 (MQ=255) acaAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTc < 1:12160/134‑1 (MQ=255) gatgCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTgg < 1:789878/150‑1 (MQ=255) cTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGgc < 1:845474‑M2/150‑3 (MQ=255) ttGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTga < 2:2117791/134‑1 (MQ=255) ttGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGgcg > 2:2358429‑M2/1‑147 (MQ=255) gACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGgcggg < 1:1608056‑M2/150‑6 (MQ=255) ccATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGggcgggcg > 2:1028802/1‑150 (MQ=255) tCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGa > 1:2254092/1‑145 (MQ=255) tCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGa < 2:2254092/145‑1 (MQ=255) agcagACCAAGAACCTGCTGGTGAGACCAC‑ACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCTCACAGGTTCACCGCTGGTTCCAGGACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCa > 1:674878/1‑150 (MQ=21) gcagACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGgcgg < 1:2105277‑M2/138‑5 (MQ=255) gcagACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAACCCGCaa > 2:43436/1‑150 (MQ=255) agACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCaaaa < 1:1756484/150‑1 (MQ=255) agACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCaaaa > 1:2057511/1‑150 (MQ=255) aCCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGC < 2:1576331‑M1/82‑1 (MQ=255) aCCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGC > 1:1576331‑M1/1‑82 (MQ=255) aCCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTCGCCCGCccccacaggttcttcaccggttctggaaccagcggtgaacctgtggga < 2:2252100‑M1/130‑49 (MQ=255) aCCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTCGCCCGCccccacaggttcttcaccggttctggaaccagcggtgaacctgtggga > 1:2252100‑M1/1‑82 (MQ=255) aCCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCAGCGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAgg < 1:418519/150‑1 (MQ=255) ccAAGACCCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGGGGGGGCGGGCGAGCCCGCAAAAggg < 1:2231012/150‑1 (MQ=255) cAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCCCTTTTGCGGGCTCGCCCGCccccacaggttcttcaccggttctggaaccagcggtgaacctgtg > 2:2286326‑M1/1‑82 (MQ=255) cAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCCCTTTTGCGGGCTCGCCCGCccccacaggttcttcaccggttctggaaccagcggtgaacctgtg < 1:2286326‑M1/127‑46 (MQ=255) cAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAgg < 2:1890872/148‑1 (MQ=255) cAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAgg > 1:1890872/1‑148 (MQ=255) ctgctgGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTga > 1:457782/1‑108 (MQ=255) ctgctgGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTga < 2:457805/108‑1 (MQ=255) tgctgGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGc < 2:1325402/142‑1 (MQ=255) tgGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCAcatgca > 1:142290/1‑150 (MQ=255) gTGAG‑CTACGACATCACTCCGCTGGGGGTCTTGTTAACCGCGTCGCGGCC‑‑TGCGCGGTCTGGCCCGCTCCCACAGGTTCACCGCTGGTTCCGGAACCGGTGAAGACCCTGTTGGGGCGGGCTCGCCCGCAAAAGGGCCGGCAcatgcatt < 2:38891/150‑2 (MQ=255) tGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATgg < 1:2001572/150‑1 (MQ=255) aG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGcc < 1:1562793/150‑1 (MQ=255) atACGGCAGCAAGCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTa < 2:748704/149‑1 (MQ=255) tACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCtcccacaggttcaccggttctggaaccagcggtgaacctgtgggagcgg < 1:610737‑M1/110‑50 (MQ=255) tACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCtcccacaggttcaccggttctggaaccagcggtgaacctgtgggagcgg > 2:610737‑M1/1‑61 (MQ=255) tACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGa > 2:918091/1‑117 (MQ=255) tACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGc > 2:2345648/1‑119 (MQ=255) tACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGc < 1:2345648/119‑1 (MQ=255) aTCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTCTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTAc > 1:1714715/1‑150 (MQ=255) aaTCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCAcatgcat > 2:1810379/1‑134 (MQ=255) aaTCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCAcatgcat < 1:1810379/134‑1 (MQ=255) aaTCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCaa > 2:389999/1‑150 (MQ=255) aTCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAAc < 2:130000/150‑1 (MQ=255) tCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGCGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACg > 2:1619064/1‑150 (MQ=255) cGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCa < 1:1028802/150‑1 (MQ=255) cGCTGGGCTTCTTCCAAACCGCCTCGCGGCC‑‑TTCGCGGGCTTGACCGCTCCCACAGGTTCACCGCTGGTCCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCa < 1:53774/150‑1 (MQ=255) gCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCccccacaggttcttcaccggttctggaaccagcggtgaacct < 2:1503686‑M1/89‑43 (MQ=255) gCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCAc < 1:280961/150‑1 (MQ=255) ttcttcTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGCAGCACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCaa > 1:286637/1‑150 (MQ=255) tctAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCtcccacaggttcttcaccggttctggaaccagcggtgaacctg < 2:1896601‑M1/79‑44 (MQ=255) tctAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCtcccacaggttcttcaccggttctggaaccagcggtgaacctg > 1:1896601‑M1/1‑36 (MQ=255) tctAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTc < 1:2239824/150‑1 (MQ=255) ctAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTgg > 2:2099165/1‑81 (MQ=255) ctAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTgg < 1:2099165/81‑1 (MQ=255) tAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGgcgg > 2:1992796‑M2/1‑82 (MQ=255) tAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTGCCAACGCACCCCGCAAGCTCGt < 2:2157696/150‑1 (MQ=255) aaCCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGACCCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTAACCGTACAAACCGCCCCCTCAAGCTCGttt > 2:519405/1‑149 (MQ=39) aCCCCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCGACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTcc < 2:769632/150‑1 (MQ=255) ccGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCaa < 1:2186985/140‑1 (MQ=255) cgcgTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCaa > 1:373066/1‑150 (MQ=255) gcgTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCaaa < 1:2008434/150‑1 (MQ=255) gcgGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGc < 1:800487/93‑1 (MQ=255) gCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCAtt > 2:726982/1‑150 (MQ=255) c‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAATCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCg < 1:554574/150‑1 (MQ=255) c‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCg < 2:583770/150‑1 (MQ=255) c‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCg < 2:2044292/150‑1 (MQ=255) cgcgGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTc < 2:229210/150‑1 (MQ=255) cgcgGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTc < 1:954727/150‑1 (MQ=255) cgGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCa < 2:303968/150‑1 (MQ=255) gggCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAg < 2:845474/150‑1 (MQ=255) gCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTc > 1:1408101/1‑150 (MQ=255) cTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTcc > 1:1696742/1‑150 (MQ=255) ttGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTCCg < 1:726982/150‑1 (MQ=255) | GGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACCCACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAG‑CTACGACATCAATCCGCTGGGCTTCTTCTAAACCGCGTCGCGGCC‑‑TTCGCGGGCTTGCCCGCTCCCACAGGTTCACCGCTGGTTCCAGAACCGGTGAAGAACCTGTGGGGGCGGGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTCCG > NC_002947/3070352‑3070648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |