| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,077,153 | A→C | 5.6% | I248S (ATC→AGC) | PP_2687 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,077,153 | 0 | A | C | 5.6% | 270.5 / 4.3 | 92 | I248S (ATC→AGC) | PP_2687 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (43/43); new base C (2/4); total (45/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GAAGTCGCTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCATTGGTAATAACCG > NC_002947/3077005‑3077299 | gAAGTCGCTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGAt < 1:2039827/150‑1 (MQ=255) aGTCGCTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGGCCCTCGATGc > 2:1721498/1‑150 (MQ=255) gTCGCTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCa > 2:122522/1‑150 (MQ=255) tCGCTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGCTGCat > 2:866213/1‑149 (MQ=255) tCGCTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAg < 1:2140211/150‑1 (MQ=255) cGCTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAgg < 2:2086648/150‑1 (MQ=255) gCTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGc > 1:477138/1‑150 (MQ=255) gCTTAGCCAGGGATGCAACCCTGAATCTAGGAGTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGc > 1:1270800/1‑150 (MQ=255) cTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGCCCCCCCCCCGTTCCTCGATGCAGGCa > 1:456923/1‑150 (MQ=255) cTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCa > 2:848865/1‑150 (MQ=255) cTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCa > 1:1907005/1‑150 (MQ=255) ttAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCAt > 1:35996/1‑150 (MQ=255) tAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATg < 2:671084/150‑1 (MQ=255) ccAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCag > 1:246363/1‑150 (MQ=255) gggATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGTATTAATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGCTGCATGCCTGCatcga < 1:760767/150‑1 (MQ=255) gggATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGCTGCATGCCTGCatcga < 2:1648064/150‑1 (MQ=255) gggATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGCTGCATGCCTGCatcga < 1:866213/150‑1 (MQ=255) aTGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCagcgagcg < 1:200672/150‑1 (MQ=255) tGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGAGCGCGTTCAGTTCGGCGGCCAGGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCAGGCagcgggagc > 2:798268/1‑145 (MQ=255) gCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGcgcg < 1:1490871/150‑1 (MQ=255) gCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGcgcg < 1:922785/150‑1 (MQ=255) cccTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCAc < 1:706047/150‑1 (MQ=255) tGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTc < 2:304307/150‑1 (MQ=255) aTCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCAc < 2:477138/150‑1 (MQ=255) tCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCAcc > 1:230777/1‑150 (MQ=255) tCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCAGTACTGCCCGGCAGGCCTGCAAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCAcc > 2:1029554/1‑150 (MQ=255) cGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCAccc < 1:1479943/150‑1 (MQ=255) gAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCa > 2:989429/1‑120 (MQ=255) gAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCa < 1:989429/120‑1 (MQ=255) gAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCg > 2:2037322/1‑150 (MQ=255) aGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTCCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGc < 1:1721498/150‑1 (MQ=255) ttCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAAcag < 2:768243/150‑1 (MQ=255) tcgATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACagcagc > 2:608303/1‑150 (MQ=255) tAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGAAAAGATCTCAACGGCTTGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACAcc < 2:1270800/150‑1 (MQ=255) cgcAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACAccggc > 1:2234730/1‑150 (MQ=255) gcAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAg > 2:1604185/1‑95 (MQ=255) gcAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAg < 1:1604185/95‑1 (MQ=255) aGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACAccggccgg < 1:2391662/150‑1 (MQ=255) gcgcgcGTTCAGTTCTGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGANCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGgc < 1:798268/150‑1 (MQ=255) aGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTgcg < 2:1831825/150‑1 (MQ=255) gTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCg > 2:241299/1‑125 (MQ=255) gTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCg < 1:241299/125‑1 (MQ=255) ttCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGCTGCACGCCAGCGATGATCGCGTCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTgcggc > 1:1748413/1‑150 (MQ=255) ttCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTgcggc > 1:1230296/1‑150 (MQ=255) gcggcCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGa > 1:535307/1‑150 (MQ=255) tGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCt > 1:1087981/1‑150 (MQ=255) gcTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGt > 2:558209/1‑150 (MQ=255) tGGGCCGCCAGCCCGGTACTCCCCGGCAGGCCTGCCAGGTTCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGTGCGCGGCACGTCCACCCGCAACAGGAGCAATTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTg < 2:173766/150‑1 (MQ=255) gggCGGCACGCCCGGTACTGCCCGGCAGACCTGCCAGGATCAGGTCCAGTTCCTCGATGAAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGa > 2:48569/1‑150 (MQ=255) ggcggcACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGaa < 1:608303/150‑1 (MQ=255) gcggcACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAg > 2:1035161/1‑150 (MQ=255) cACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCtt > 1:240685/1‑150 (MQ=255) ggTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGa < 2:456923/150‑1 (MQ=255) ggTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGa < 1:1035161/150‑1 (MQ=255) ggTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGa < 1:122522/150‑1 (MQ=255) gTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAg < 1:1029554/150‑1 (MQ=255) tGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCACGCATGCAGCAAGCGCGGCACGTCCACCCGCAACAGTAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCa < 1:1144470/150‑1 (MQ=255) cAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAgcgcgcg < 2:35996/150‑1 (MQ=255) gCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCgcag > 1:2140334/1‑150 (MQ=255) cTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGa > 2:408382/1‑107 (MQ=255) cTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGa < 1:408382/107‑1 (MQ=255) tGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGaa > 1:1861680/1‑120 (MQ=255) tGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGaa < 2:1861680/120‑1 (MQ=255) tGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGcagcag < 1:848865/150‑1 (MQ=255) gCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGgcgc > 2:2356519/1‑103 (MQ=255) gCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGgcgc < 1:2356519/103‑1 (MQ=255) ccAGGACCAGGTACAGTTACTCGATGCCGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAggg < 2:2322954/150‑1 (MQ=255) aGGATCAGGTCCAGTTCCTCGATGCGGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGgcg > 2:1642082/1‑150 (MQ=255) aGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGgcg > 2:1100618/1‑150 (MQ=255) gATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGa > 2:1782729/1‑100 (MQ=255) gATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGa < 1:1782729/100‑1 (MQ=255) gATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAgg < 1:442841/145‑1 (MQ=255) gATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAgg > 2:442841/1‑145 (MQ=255) gATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCt > 2:1847666/1‑150 (MQ=255) cgatcttCCCGTTCTGCGCTGTAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTc < 2:1642402/144‑1 (MQ=255) tCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTcc > 1:1476332/1‑150 (MQ=255) cAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCa < 2:535307/150‑1 (MQ=255) aGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCAt > 1:801679/1‑150 (MQ=255) gTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCATTg < 2:2234730/150‑1 (MQ=255) gTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCATTg > 1:2398654/1‑150 (MQ=255) gTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCATTg < 1:1711759/150‑1 (MQ=255) tCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCATTgg < 1:83313/150‑1 (MQ=255) ccAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCagatcg > 1:1642402/1‑145 (MQ=255) ccAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCATTGGt < 2:1782480/150‑1 (MQ=255) gTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATaga < 1:481860/93‑1 (MQ=255) gTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATaga > 2:481860/1‑93 (MQ=255) ttCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCATTGGtaata > 1:2359176/1‑150 (MQ=255) tCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCATTGGTAATAACcg > 2:1023957/1‑150 (MQ=255) gATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGgc > 1:1690695/1‑66 (MQ=255) gATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGgc > 1:1734756/1‑66 (MQ=255) gATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGgc < 2:1690695/66‑1 (MQ=255) gATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGgc < 2:1734756/66‑1 (MQ=255) | GAAGTCGCTTAGCCAGGGATGCAACCCTGCATCGAGGATTTCGTCGATTGCGGTGTAGCGCAGGCGCGCGTTCAGTTCGGCGGCCATGCGCTGGGCGGCACGCCCGGTACTGCCCGGCAGGCCTGCCAGGATCAGGTCCAGTTCCTCGATGCAGGCATGCAGCGAGCGCGGCACGTCCACCCGCAACAGCAGCAACTCGGACACCGGCCGGGCGCTGGGTGCGGCGCGATAGAGCTCGTTGAAGGCTTCGTACGAGGTCAGCGCGCGCAGCAGGGCGCTCCATTGGTAATAACCG > NC_002947/3077005‑3077299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |