| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,096,109 | G→A | 5.7% | R102H (CGC→CAC) | PP_2704 → | M20/M25/M40 family peptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,096,109 | 0 | G | A | 5.7% | 260.6 / 4.4 | 87 | R102H (CGC→CAC) | PP_2704 | M20/M25/M40 family peptidase |
| Reads supporting (aligned to +/- strand): ref base G (46/36); new base A (2/3); total (48/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.69e-01 | |||||||||||
TGCATCGCAATGTGGGCGGGCATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGCGATGATCGAC > NC_002947/3095965‑3096257 | tGCATCGCAATGTGGGCGGGCATGGTGTGGTCGGCGGGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCgcatgc > 2:108430/1‑150 (MQ=255) cATCGCAATGTGGGCGGGCATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCgcatgcat > 1:595575/1‑150 (MQ=255) cGCAATGTGGGCGGGCATGGTGTGGACTGCGTGCTCAACGTGGGGGACAGCCCGCCCAGCATTGGTTTGCGTGCAGACATGGACGCACTGCCCAGGGGCGAAAAGAATGCGATTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGcc > 1:1655759/1‑150 (MQ=255) gCAATGTGGGCGGGCATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCt < 2:2056733/150‑1 (MQ=255) cAATGTGGGCGGGCATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCACaggcatgcatg > 1:197665/1‑147 (MQ=255) tgtgGGCGGGCATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCACGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGTATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTgg < 1:1951988/150‑1 (MQ=255) tgGGCGGGCATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCACAGGCATGCATGCGGcc > 2:2030550/1‑150 (MQ=255) ggcgggcATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCAt < 2:536618/150‑1 (MQ=255) ggcgggcATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCACAGGCATGCATGCGGccgg < 1:1068122/150‑3 (MQ=255) ggcgggcATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCACAGGCATGCATGCGGccgg < 2:197665/150‑3 (MQ=255) gggcATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCACAGGCATGCATGCGGccgggga < 1:2030550/150‑6 (MQ=255) cATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACggg > 1:965940/1‑150 (MQ=255) aTGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGc > 1:1827254/1‑150 (MQ=255) gtgGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATAcc > 1:1590720/1‑150 (MQ=255) gCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCctgct < 2:1827254/150‑1 (MQ=255) gCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCACGCACTTATGACGGGCATACCGCGATCctgct < 1:1269213/150‑1 (MQ=255) cTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACggg > 2:625352/1‑132 (MQ=255) cTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACggg < 1:625352/132‑1 (MQ=255) tGAAAGTGGGGGACAGCTCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTgg > 2:1169355/1‑150 (MQ=255) tGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTgg > 2:1577732/1‑150 (MQ=255) tGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTgg > 1:842633/1‑150 (MQ=255) gAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGc > 2:60671/1‑150 (MQ=255) gggACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTg > 1:341083/1‑150 (MQ=255) ggACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTgc > 1:1238787/1‑150 (MQ=255) aCAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTgcgc > 2:771286/1‑150 (MQ=255) aGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCaa > 2:312921/1‑150 (MQ=255) gCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCtgtg > 1:2038117/1‑105 (MQ=255) gCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCtgtg < 2:2038117/105‑1 (MQ=255) gCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCAACTAAGATCCCCGGCCGCATGCATGCGTGTGGCCGTGTGGGGCATACTGCGATCCTGCTGGCAGCCGCTGCGCAAc > 1:541233/1‑150 (MQ=255) cccGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACt > 2:1336387/1‑150 (MQ=255) aTCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTaca > 1:2192758/1‑150 (MQ=255) tCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGCATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGACTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTacac > 1:2129448/1‑150 (MQ=255) tCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTacac > 2:163155/1‑150 (MQ=255) tCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTacac > 2:2376908/1‑150 (MQ=255) ggTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGc < 2:341083/150‑1 (MQ=255) gTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGcc > 2:1373169/1‑150 (MQ=255) gTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCa > 1:1335648/1‑150 (MQ=255) gCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAAc < 1:1336387/150‑1 (MQ=255) aCATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCa < 2:1188335/150‑1 (MQ=255) aTGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGGTCCCCGGCCGCATGCAATCCTGTGGCCATGACTGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCAAGTGCAACGGCACg > 1:1375058/1‑150 (MQ=255) aTGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACg > 1:1716024/1‑150 (MQ=255) aTGGACGCACTGCCCATGGGCGAAAAGAATGCGGTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACg > 2:1933942/1‑150 (MQ=255) tGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGt < 2:842633/150‑1 (MQ=255) ggACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGtt > 1:219940/1‑150 (MQ=255) gACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGc > 1:2189613/1‑132 (MQ=255) gACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGc < 2:2189613/132‑1 (MQ=255) aCGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGa > 2:2032356/1‑150 (MQ=255) gCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCatgcatgc > 1:627605/1‑65 (MQ=255) gCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCatgcatgc < 2:627605/65‑1 (MQ=255) gCACTGCCCATGGCCGAAAAGAATGTGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATTCATGCCTGTGTCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGTGCCGTTGAAc < 2:721074/150‑1 (MQ=255) aCTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAAc > 1:262028/1‑136 (MQ=255) aCTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAAc < 2:262028/136‑1 (MQ=255) aCTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGTGCCGTTGAActg < 1:1455661/150‑3 (MQ=255) aCTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGt > 2:1170090/1‑150 (MQ=255) aCTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGt > 2:1294833/1‑150 (MQ=255) cTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTg < 1:1170090/150‑1 (MQ=255) ccATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGatat > 2:1660211/1‑150 (MQ=255) cATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTggcgg > 2:117794/1‑113 (MQ=255) cATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTggcgg < 1:117794/113‑1 (MQ=255) aTGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTc > 2:2239703/1‑150 (MQ=255) gggCGAAAAGAATGCGTTTGCTCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACTTTGAACGTGATATTCCa < 2:1238787/150‑1 (MQ=255) gCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGc < 1:2032356/150‑1 (MQ=255) gAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCctgctg > 1:1676112/1‑84 (MQ=255) gAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCctgctg < 2:1676112/84‑1 (MQ=255) aaaaGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCcg > 2:575736/1‑150 (MQ=255) aaaGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACTGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAAc < 2:2144315/133‑1 (MQ=255) aaaGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACTGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAAc > 1:2144315/1‑133 (MQ=255) aTGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAgg < 1:312921/150‑1 (MQ=255) gcATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGata > 1:167159/1‑124 (MQ=255) gcATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGata < 2:167159/124‑1 (MQ=255) gcATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGc > 2:1439039/1‑150 (MQ=255) tGCCAGCAAGACCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCggg < 1:436093/150‑1 (MQ=255) gCCAGCAAGGTCCCGGGCCGCATGCATCCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGAGTTTCCAGCCCGACGCGGAAGGCCTGGCgggg < 1:2266881/150‑1 (MQ=255) ccAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCggggg < 2:1335648/150‑1 (MQ=255) cAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGATCAACGGCACGTTGAACGGGATATTCCAGCCCGCCGAGGAAGGCCTGGCGGGGGc > 1:827890/1‑150 (MQ=255) aGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGcc > 2:1608414/1‑150 (MQ=255) cAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCaa > 2:98961/1‑150 (MQ=255) aGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAgg < 1:1169355/150‑1 (MQ=255) gATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGc > 2:1464146/1‑150 (MQ=255) tCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGCga < 2:1590720/150‑1 (MQ=255) ccccGGCCGCATGCATGCCTGTGGCCATGACGGGCATAcc < 2:414235/40‑1 (MQ=255) ccccGGCCGCATGCATGCCTGTGGCCATGACGGGCATAcc > 1:414235/1‑40 (MQ=255) cccGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGCgatg < 1:2376908/150‑1 (MQ=255) ccGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGCga > 2:1672244/1‑147 (MQ=255) ccGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGCga < 1:1672244/147‑1 (MQ=255) ggCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGCGATGATc < 2:1334943/150‑1 (MQ=255) ggCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGCGATGATc < 1:163155/150‑1 (MQ=255) gCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGCGATGATcg < 1:1439039/150‑1 (MQ=255) cGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGCGATGATcgac < 2:2092864/150‑1 (MQ=255) gcatgcatGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGa < 2:1646605/99‑1 (MQ=255) gcatgcatGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGa > 1:1646605/1‑99 (MQ=255) | TGCATCGCAATGTGGGCGGGCATGGTGTGGTCGGCGTGCTGAAAGTGGGGGACAGCCCGCGCAGCATCGGTTTGCGTGCAGACATGGACGCACTGCCCATGGGCGAAAAGAATGCGTTTGCGCATGCCAGCAAGATCCCCGGCCGCATGCATGCCTGTGGCCATGACGGGCATACCGCGATCCTGCTGGCAGCCGCTGCGCAACTGGCGGCTACACGCCAGTTCAACGGCACGTTGAACGTGATATTCCAGCCCGACGAGGAAGGCCTGGCGGGGGCCAAGGCGATGATCGAC > NC_002947/3095965‑3096257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |