| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,137,696 | A→G | 8.8% | intergenic (+81/‑209) | PP_2753 → / → PP_2754 | ABC transporter ATP‑binding protein/OprD family outer membrane porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,137,696 | 0 | A | G | 8.8% | 256.9 / 11.6 | 91 | intergenic (+81/‑209) | PP_2753/PP_2754 | ABC transporter ATP‑binding protein/OprD family outer membrane porin |
| Reads supporting (aligned to +/- strand): ref base A (41/42); new base G (5/3); total (46/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.60e-01 | |||||||||||
TGCTGCCGAGCTGGCCGCGCGGGAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTTTGTTGGCATGGTTGTTG > NC_002947/3137555‑3137843 | tgctgcCGAGCTGGCCGCGCGGGAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGt > 2:1197651/1‑150 (MQ=255)tgctgcCGAGCTGGCCGCGCGGGAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGt > 2:1304755/1‑150 (MQ=255) ctgcCGAGCTGGCCGCGCGGGAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGttt > 1:1820920/1‑150 (MQ=255) gAGCTGGCCGCGCGGGAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTc < 1:247064/150‑1 (MQ=255) gCTGGCCGCGCGGGAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCACCGCGGCCCAGGCCGCGTTTTTTTCGc < 1:2234963/150‑1 (MQ=255) gcgcgGGAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTGTAGGCGTCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACg > 1:1956736/1‑150 (MQ=255) cgGGATGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCTCAGGCCGCGTTTTTTTCGCCCTGACGaaa < 1:361106/150‑1 (MQ=255) cgGGAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGaaa < 2:1387604/150‑1 (MQ=255) ggAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACTCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGaaa > 1:1957121/1‑148 (MQ=255) ggAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACTCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGaaa < 2:1957121/148‑1 (MQ=255) atatTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCtgt < 1:1886179/150‑1 (MQ=255) atatTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCtgt < 1:1628114/150‑1 (MQ=255) tatTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCtgtg < 2:1820920/150‑1 (MQ=255) cAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCTGGGCCGCGtt < 1:219292/120‑1 (MQ=255) cAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCTGGGCCGCGtt > 2:219292/1‑120 (MQ=255) aGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGcc > 2:1093068/1‑150 (MQ=255) tGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGt > 2:1813818/1‑150 (MQ=255) tGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGt > 1:173989/1‑150 (MQ=255) ggcAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGc < 1:515229/150‑1 (MQ=255) ggcAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGc > 1:465216/1‑150 (MQ=255) ggcAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGc < 2:808410/150‑1 (MQ=255) cAAGGGCTTACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAg < 2:1875525/150‑1 (MQ=255) cAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGaaa < 1:502938/118‑1 (MQ=255) cAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGaaa > 2:502938/1‑118 (MQ=255) aaGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGa > 2:698079/1‑150 (MQ=255) aGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGAt < 1:1304755/150‑1 (MQ=255) ggCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTg > 2:611728/1‑150 (MQ=255) ctgactgaGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCt < 2:2178718/150‑1 (MQ=255) tgactgaGCGGTGGCGACGGCTGTGGAGCGGCGCGGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCtt > 1:638423/1‑150 (MQ=255) tgactgaGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCtt < 1:1093068/150‑1 (MQ=255) actgaGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCg < 1:698079/150‑1 (MQ=255) tgaGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCa < 1:1657101/138‑1 (MQ=255) tgaGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCa > 2:1657101/1‑138 (MQ=255) tgaGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCa > 1:1965385/1‑150 (MQ=255) gCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGca > 2:2041849/1‑150 (MQ=255) gACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAgcg < 2:1365141/99‑1 (MQ=255) gACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAgcg > 1:1365141/1‑99 (MQ=255) aCGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGcatca > 1:978309/1‑150 (MQ=255) cTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGG‑AGCGCCGAGATGGGCAGATTGCTTCGCAGACGGAGCATCATAgt > 2:2372236/1‑150 (MQ=255) tgtgGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAg < 2:1917971/140‑1 (MQ=255) tgtgGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAg > 1:1917971/1‑140 (MQ=255) tgtgGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAgtg > 1:1857541/1‑150 (MQ=255) aGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAg < 1:2041849/150‑1 (MQ=255) aGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAg > 1:309084/1‑150 (MQ=255) ggcgCAGTCATACCGCCTTCTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑aa < 2:1588643/150‑1 (MQ=255) ggcgAAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑aa < 1:191805/150‑1 (MQ=255) tCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTc < 1:611728/150‑1 (MQ=255) aTACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCaa > 2:605232/1‑150 (MQ=255) ccGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGa > 2:2040975/1‑134 (MQ=255) ccGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGa < 1:2040975/134‑1 (MQ=255) cGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATa > 1:2249255/1‑126 (MQ=255) cGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATa > 1:1604703/1‑126 (MQ=255) cGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATa < 2:1604703/126‑1 (MQ=255) cGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATa < 2:2249255/126‑1 (MQ=255) gCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGATG‑AATTTGTTCAATTTCt < 2:761526/150‑1 (MQ=255) ccTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCtt < 1:520417/150‑1 (MQ=255) ttttACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAgttgtt < 1:1857527/139‑1 (MQ=255) ttttACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAgttgtt > 2:1857527/1‑139 (MQ=255) ttttACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGa > 1:1654213/1‑150 (MQ=255) tttACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGaa < 1:1813818/150‑1 (MQ=255) aCTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGTATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATaa < 1:1068842/150‑1 (MQ=255) tGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACa > 2:1568212/1‑150 (MQ=255) aGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAAt > 1:2090321/1‑150 (MQ=255) gTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGttt < 1:605232/150‑1 (MQ=255) ttCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGGGCCATGGTG‑GCAATTGCTTGAATAACAATGGttttttttt < 1:2372236/150‑1 (MQ=255) ttCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGttttttttt > 2:2128106/1‑150 (MQ=255) ccATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGc > 1:1162038/1‑74 (MQ=255) ccATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGc < 2:1162038/74‑1 (MQ=255) ccATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAg < 1:1592146/113‑1 (MQ=255) ccATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAg > 2:1592146/1‑113 (MQ=255) ccATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTttgt > 2:395209/1‑150 (MQ=255) cATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGcatca > 1:251876/1‑98 (MQ=255) cATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGcatca < 2:251876/98‑1 (MQ=255) aTTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTttgttt > 2:2094651/1‑149 (MQ=255) tCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCtt > 2:1498669/1‑123 (MQ=255) tCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCtt < 1:1498669/123‑1 (MQ=255) aaCGCGGCCTGGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTTTGTTGGCAt > 1:1806713/1‑150 (MQ=255) aCGCGGCCTGGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGa < 2:1238628/101‑1 (MQ=255) aCGCGGCCTGGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGa > 1:1238628/1‑101 (MQ=255) aCGCGGCCTGGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑a > 2:1696839/1‑104 (MQ=255) aCGCGGCCTGGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑a < 1:1696839/104‑1 (MQ=255) aCGCGGCCTGGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTtttttgtcctt > 2:2294900/1‑145 (MQ=255) cgcgGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTTTGTTGGCATgg < 2:2090321/150‑1 (MQ=255) gcgGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTTTGTTGGCATGgt > 2:597584/1‑150 (MQ=255) gCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTTTGTTGGCATGgttgt < 2:1965385/150‑1 (MQ=255) ccaaGGCCGTGTTCTTTGCGCCCGGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCGGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTTTGTTGGCATGgttgtt < 1:410170/147‑1 (MQ=255) ccAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATaa > 1:644902/1‑119 (MQ=255) ccAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATaa < 2:644902/119‑1 (MQ=255) ccAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTttgtt < 1:1709464/137‑1 (MQ=255) ccAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTttgtt > 2:1709464/1‑137 (MQ=255) ccAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTTTGTTGGCATGGttgttg < 1:1041251/150‑1 (MQ=255) ccAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTTTGTTGGCATGGttgttg > 1:2094598/1‑150 (MQ=255) | TGCTGCCGAGCTGGCCGCGCGGGAAGATATTCAGCATTTCTACCTGGGCGGCAAGGGCTGACTGAGCGGTGGCGACGGCTGTGGAGCGGCGCAGTCATACCGCCTTTTACTGAGTAGGTGATGTTCCATTCAACGCGGCCCAGGCCGCGTTTTTTTCGCCCTGACGAAAGCGCTGTGGCGCCGGCAACAGC‑AGTTGTGCAGATTGCTTCGCAGACGGAGCATCATAGTGTTGAGG‑AAGTTGTTCAATTGCTTGAATAACAATGGTTTTTTTTTGTTGGCATGGTTGTTG > NC_002947/3137555‑3137843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |