| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,172,004 | G→C | 6.4% | R78P (CGG→CCG) | PP_2784 → | short‑chain dehydrogenase/reductase family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,172,004 | 0 | G | C | 6.4% | 296.9 / 9.1 | 95 | R78P (CGG→CCG) | PP_2784 | short‑chain dehydrogenase/reductase family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (45/42); new base C (3/3); total (49/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01 | |||||||||||
GAGCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATGGCGGATG > NC_002947/3171856‑3172153 | gAGCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCgg > 2:2346714/1‑150 (MQ=255) aGCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCggg < 1:847633/150‑1 (MQ=255) aGCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCggg > 2:1847870/1‑150 (MQ=255) aGCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCggg < 1:1720170/150‑1 (MQ=255) gCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGt < 1:2346714/150‑1 (MQ=255) aCCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCg > 1:1867837/1‑150 (MQ=255) ccTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCgg > 2:2085755/1‑150 (MQ=255) ttttGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCt > 2:533279/1‑150 (MQ=255) tttGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCtt < 1:89390/150‑1 (MQ=255) tttGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCCGGTCGGcca > 2:1444079/1‑148 (MQ=255) tGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCCGGTCGGccagg < 1:1444079/150‑5 (MQ=255) aTCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTc > 2:2047429/1‑150 (MQ=255) cttgATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTAGCCGA‑CCGGGTCGGCTTTGTCGAtgtg < 2:1548919/150‑1 (MQ=255) gATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTg < 1:2047429/150‑1 (MQ=255) gATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCAAACCCGCTACTGCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTg < 1:1376632/150‑1 (MQ=255) tGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAgcg > 1:966486/1‑150 (MQ=255) tGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAgcg > 2:493028/1‑150 (MQ=255) cAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCacaag < 2:1010979/145‑5 (MQ=255) cAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAg > 1:1010979/1‑145 (MQ=255) cAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCg < 1:1847870/150‑1 (MQ=255) aaCCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATTAAGCGAACATCGCCGGTGCCGCCAGCCTGCAAGTTGTGCCCTAGGATC‑GGACGAGCCGGGGCGGCTTTGTCGATGTGCTGGTCAACAGCGCCgg > 1:2341872/1‑150 (MQ=255) aaCCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTg > 1:1809609/1‑125 (MQ=255) aaCCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTg < 2:1809609/125‑1 (MQ=255) aaCCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCgg > 2:2237241/1‑150 (MQ=255) aaCCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCgg < 1:2237241/150‑1 (MQ=255) aaCCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCCATGACTTCAGCCTGCACATTATGTTCGGGCTTCTGTTCGA‑GGTGTGCGGCTTTGTCGATGTGCTGGTCAACAGCGCCgg > 1:2341923/1‑150 (MQ=255) aCCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCggg < 2:1534160/150‑1 (MQ=255) cTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCggggg > 2:1209689/1‑149 (MQ=255) cTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGt > 2:790297/1‑150 (MQ=255) cTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGt < 1:493028/150‑1 (MQ=255) ttGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTg > 2:377931/1‑132 (MQ=255) ttGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTg < 1:377931/132‑1 (MQ=255) gCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTg < 1:1007546/150‑1 (MQ=255) gCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTg < 1:956403/150‑1 (MQ=255) ggggTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGcga > 2:763195/1‑150 (MQ=255) gggtgggtCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAAGATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGcgac > 2:1311092/1‑150 (MQ=255) gtgggtCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCttt < 2:614937/112‑1 (MQ=255) gtgggtCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCttt > 1:614937/1‑112 (MQ=255) gtgggtCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGcgacga > 2:1929566/1‑150 (MQ=255) gtgggtCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGcgacga < 1:110717/150‑1 (MQ=255) aaTTTGCCGCTCGTATCGCAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGAcc < 1:1929566/150‑1 (MQ=255) tttGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTc < 1:2062397/150‑1 (MQ=255) cTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACt > 2:2257873/1‑150 (MQ=255) tCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCggg < 1:930350/112‑1 (MQ=255) tCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCggg > 2:930350/1‑112 (MQ=255) tCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTAGACGA‑CCGGGTCGGCTTTGTTTATTTGGTGGTCTTCTTCGTTGGTTTCTTCGACGAGAACGAACCCGAAGACCTCGACAACTg > 2:272571/1‑150 (MQ=255) gTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGc > 2:1858757/1‑150 (MQ=255) tATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGca > 2:1591694/1‑150 (MQ=255) aTCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTTGCCGA‑CCGGGTCGGCTGTGTGGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTAAttt > 1:1066901/1‑150 (MQ=255) aTCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCAttt < 2:428387/150‑1 (MQ=255) aTCAAGCGAACATCGCCGACCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCAttt < 1:533279/150‑1 (MQ=255) tCAAGCGAACATCGCCGATCTGGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGGTGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGTGGTCTGCGCCGAGCCCGAACGCGAAGACCTCGACAACTGGCACTAGGTCATTTc > 2:48552/1‑150 (MQ=255) aaGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAgaacgaac < 2:1829725/114‑1 (MQ=255) aaGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAgaacgaac > 1:1829725/1‑114 (MQ=255) aaGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGa < 1:1858757/150‑1 (MQ=255) aaGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGa < 2:733035/150‑1 (MQ=255) aaGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGAATTGGCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGa < 1:763195/150‑1 (MQ=255) aGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGAt > 1:2278561/1‑150 (MQ=255) aaCATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAAc < 1:2085755/150‑1 (MQ=255) aaCATCGCCGATCGCGCCAGCCTGCAACTTTTGGTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCAGGGTCTGCGACTAGAACCAGCCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAAc < 1:48552/150‑1 (MQ=255) gCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAAc > 2:1482873/1‑150 (MQ=255) caaTCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAAc < 1:2229161/71‑1 (MQ=255) caaTCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAAc > 2:2229161/3‑73 (MQ=255) cGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGcc < 2:610480/79‑1 (MQ=255) cGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGcc > 1:610480/1‑79 (MQ=255) gCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGcgacga < 2:541256/86‑1 (MQ=255) gCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGcgacga > 1:541256/1‑86 (MQ=255) ccAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGaa > 2:2140683/1‑98 (MQ=255) ccAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGaa < 1:2140683/98‑1 (MQ=255) cAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCggg > 2:1495327/1‑73 (MQ=255) cAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCggg < 1:1495327/73‑1 (MQ=255) cAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTa < 1:2257873/150‑1 (MQ=255) cTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTa < 2:1085633/146‑1 (MQ=255) cTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTa > 1:1085633/1‑146 (MQ=255) gCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGcc > 1:582128/1‑64 (MQ=255) gCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGcc < 2:582128/64‑1 (MQ=255) cAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCAcc < 1:1482873/150‑1 (MQ=255) cAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCAAGACGTTGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCAcc > 2:676381/1‑150 (MQ=255) cAACTTCTGTTCAAGGGCCGGGCCGA‑ACAAGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCAcc < 1:1209689/150‑1 (MQ=255) aaCTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGaa > 1:422103/1‑89 (MQ=255) aaCTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGaa < 2:422103/89‑1 (MQ=255) aaCTTCTGTTCAAGGGCCTGGCCGA‑CAGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCt > 2:2170211/1‑150 (MQ=255) ttCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGt > 2:2250386/1‑150 (MQ=255) tGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTtgt < 1:1591694/150‑1 (MQ=255) gTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTtgtg > 1:609638/1‑150 (MQ=255) gTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTtgtg > 1:72747/1‑150 (MQ=255) aaGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGtgcctg > 1:329857/1‑150 (MQ=255) aaGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGtgcctg > 1:2031207/1‑150 (MQ=255) gCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCAACGAGAACGAACCAGCCGAAGGGGACAACTGGGACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCAc > 1:1495940/1‑150 (MQ=255) acaaagCCGA‑CCCGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTtgt < 1:112394/136‑1 (MQ=255) acaaagCCGA‑CCCGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTtgt > 2:112394/6‑141 (MQ=255) cTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTAc < 1:1272725/126‑1 (MQ=255) cTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTAc > 2:1272725/1‑126 (MQ=255) aaagCCGA‑CCCGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGTGTCTGCGACGAGAACGAAcc < 1:20892/65‑1 (MQ=255) aaagCCGA‑CCCGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGTGTCTGCGACGAGAACGAAcc > 2:20892/4‑68 (MQ=255) ggCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGAt < 1:669450/150‑1 (MQ=255) ccGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATgg < 1:790297/150‑1 (MQ=255) cGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATGGc < 2:966486/150‑1 (MQ=255) gA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATGGCg > 2:16263/1‑150 (MQ=255) gggTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATGGCGGAtg < 2:2031207/150‑1 (MQ=255) | GAGCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGA‑CCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATGGCGGATG > NC_002947/3171856‑3172153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |