| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,203,606 | A→T | 5.7% | H105L (CAT→CTT) | PP_2810 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,203,606 | 0 | A | T | 5.7% | 340.7 / 7.1 | 104 | H105L (CAT→CTT) | PP_2810 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (47/51); new base T (3/3); total (50/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
CCAGTTCTAGCGGCGATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTGGGTTTCGCCAAGCTTGAT > NC_002947/3203462‑3203754 | ccAGTTCTAGCGGCGATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCTTGctc < 1:1564648/150‑3 (MQ=255)ccAGTTCTAGCGGCGATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGCGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGa < 1:1677790/150‑1 (MQ=255) ccgatcaggcgATATACCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGTCAGGGTGCGAGTGGAGCACTGGAAGTTCAAGGGTGATAAGAAACTCTACAACTTCGACTCGAACAATGTGGCACAGCATGCGAGCaa < 1:1749129/143‑1 (MQ=255) tAGCGGCGATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCa < 1:385933/138‑1 (MQ=255) tAGCGGCGATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCa > 2:385933/1‑138 (MQ=255) tAGCGGCGATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCt < 1:518151/150‑1 (MQ=255) aGCGGCGATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTg > 1:1950040/1‑150 (MQ=255) cggcgATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTc < 1:8044/150‑1 (MQ=255) cggcgATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTc < 2:1802432/150‑1 (MQ=255) gcgATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGTTGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAgagatcgg > 2:1749129/1‑143 (MQ=255) cgATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGcc > 1:1166715/1‑150 (MQ=255) gATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCACGCTGTCGCCt > 1:1710092/1‑150 (MQ=255) gATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCt > 1:1303745/1‑150 (MQ=255) atatTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTg < 2:2285859/150‑1 (MQ=255) ttCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGc > 2:1633246/1‑130 (MQ=255) ttCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGc < 1:1633246/130‑1 (MQ=255) ttCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGc > 1:2118815/1‑150 (MQ=255) gCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTc < 1:606123/150‑1 (MQ=255) tGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCTTGCTCGCATGCTGtgcca < 2:462998/137‑5 (MQ=255) tGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGaa < 2:761378/150‑1 (MQ=255) tGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGaa < 2:1950040/150‑1 (MQ=255) gggCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAAc < 2:1166715/150‑1 (MQ=255) gCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCaa < 2:1223331/150‑1 (MQ=255) cagGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCa < 2:2044843/150‑1 (MQ=255) ggCAGGATGGAGTTACGGCAAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTa > 1:202601/1‑150 (MQ=255) gATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCa > 2:1343665/1‑150 (MQ=255) gATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCa > 2:487755/1‑150 (MQ=255) tGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATg < 2:2060955/150‑1 (MQ=255) gAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGa < 2:293294/150‑1 (MQ=255) aGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGAt < 2:812526/150‑1 (MQ=255) gTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGAt > 1:1847994/1‑149 (MQ=255) gTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGAt < 2:1847994/149‑1 (MQ=255) gtACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCGCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGt < 2:347193/149‑1 (MQ=255) cGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAAc < 1:832897/113‑1 (MQ=255) cGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAAc > 2:832897/1‑113 (MQ=255) ccAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTccc < 1:433363/126‑1 (MQ=255) ccAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTccc > 2:433363/1‑126 (MQ=255) gAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCcgtc < 1:487755/150‑1 (MQ=255) ggggAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCcgtcgt > 2:2026403/1‑150 (MQ=255) gggAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTa < 2:1125985/150‑1 (MQ=255) ggAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTAc < 2:2118815/150‑1 (MQ=255) gAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCt > 1:1876250/1‑84 (MQ=255) gAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTAcc > 2:1903961/1‑150 (MQ=255) aCTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGGTATCGCATGTATGTCTACCCGACCCGTCGTACCTGCa < 2:1075762/150‑1 (MQ=255) cTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAg > 1:175331/1‑150 (MQ=255) cTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAg > 2:494644/1‑150 (MQ=255) tGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCt < 1:492511/78‑1 (MQ=255) tGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCt > 2:492511/1‑78 (MQ=255) tGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCcgtc > 1:1406816/1‑139 (MQ=255) tGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCcgtc < 2:1406816/139‑1 (MQ=255) tGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAgc > 2:1075505/1‑150 (MQ=255) tGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAgc > 2:2383168/1‑150 (MQ=255) tGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAgc > 2:2056990/1‑150 (MQ=255) ggAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAgcg > 1:1432020/1‑150 (MQ=255) gAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCa > 2:91296/1‑106 (MQ=255) gAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCa < 1:91296/106‑1 (MQ=255) gAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAgcgc > 2:510835/1‑150 (MQ=255) aGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAg > 1:2243472/1‑65 (MQ=255) aGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAg < 2:2243472/65‑1 (MQ=255) aaGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTac < 2:883599/120‑1 (MQ=255) aaGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTac > 1:883599/1‑120 (MQ=255) gggTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGtt < 1:2409609/84‑1 (MQ=255) ggTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACATCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTc < 2:1741167/150‑1 (MQ=255) gATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTg < 1:1075505/150‑1 (MQ=255) aTAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTgg < 2:1432020/150‑1 (MQ=255) tAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGc < 2:175331/150‑1 (MQ=255) tAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGc < 1:2383168/150‑1 (MQ=255) aaGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGcc < 2:567153/150‑1 (MQ=255) gCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCga > 2:1389274/1‑150 (MQ=255) gCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCga < 2:2222349/150‑1 (MQ=255) acaacaTCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAg > 1:2194150/1‑81 (MQ=255) acaacaTCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAg < 2:2194150/81‑1 (MQ=255) acaacaTCGACGCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCa < 1:494644/150‑1 (MQ=255) aacaTCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCa > 1:209812/1‑78 (MQ=255) aacaTCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCa < 2:209812/78‑1 (MQ=255) gACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGc < 1:1830881/49‑1 (MQ=255) gACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGc > 2:1830881/1‑49 (MQ=255) gACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTAc < 2:1726650/107‑1 (MQ=255) gACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTAc > 1:1726650/1‑107 (MQ=255) aCTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACg > 2:666323/1‑150 (MQ=255) cTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGt > 2:1829456/1‑150 (MQ=255) tCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGcc < 1:970547/129‑1 (MQ=255) tCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTg > 2:1541484/1‑150 (MQ=255) tCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTg > 2:1933896/1‑150 (MQ=255) cGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTgg < 1:510835/150‑1 (MQ=255) cGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCACGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTgg < 1:170110/150‑1 (MQ=255) gAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTAAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATCTCGTGGCCGAGAACACCa > 2:2170546/1‑137 (MQ=255) gAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTAAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATCTCGTGGCCGAGAACACCa < 1:2170546/137‑1 (MQ=255) aaCAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTacccgac < 1:1701820/92‑1 (MQ=255) aaCAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTacccgac > 2:1701820/1‑92 (MQ=255) aaCAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTGGGt > 1:1220222/1‑150 (MQ=255) gcgacaGCTTGCTCGCATGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTGGGTTTCGCCaa > 1:1164608/4‑150 (MQ=255) gCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTGGGTTTCGCCAAg > 1:204180/1‑150 (MQ=255) gCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTGGGTTTCGCCAAg > 2:2002795/1‑150 (MQ=255) gacaGCTTGCTCGCATGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCa > 1:1693299/2‑96 (MQ=255) gacaGCTTGCTCGCATGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCa < 2:1693299/95‑1 (MQ=255) cacaGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTgg > 1:1701775/1‑138 (MQ=255) cacaGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTgg < 2:1701775/138‑1 (MQ=255) acaGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTGGGTTTCGCCAAGCt > 2:2341202/1‑150 (MQ=255) cATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTGGGTTTCGCCAAGCTTGAt < 1:1343665/150‑1 (MQ=255) | CCAGTTCTAGCGGCGATATTCCAGCCTGGGCACAGCCAGGGCAGCAGGGGGCAGGATGGAGTTACGGCCAGGTACGAGGGGAGCACTGGAAGTTCAAGGGTGATAAGCCCCTCTACAACATCGACTCGAACAATGTGGCACAGCATGCGAGCAAGCTGTCGCCTGGGCAGCTCGAACTGTTCAAGAAAGTCCCAGGCTATCGCATGGATGTCTACCCGACCCGTCGTACCTGCAGCGCGCCGGATTTCGTGGCCGAGAACACCAGGCAGAACGTGGGTTTCGCCAAGCTTGAT > NC_002947/3203462‑3203754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |