| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,255,886 | C→T | 6.4% | intergenic (‑106/+30) | PP_2852 ← / ← PP_2853 | sulfatase domain‑containing protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,255,886 | 0 | C | T | 6.4% | 269.2 / 6.8 | 94 | intergenic (‑106/+30) | PP_2852/PP_2853 | sulfatase domain‑containing protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (46/41); new base T (4/2); total (50/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.48e-01 | |||||||||||
CAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGCCAATA > NC_002947/3255744‑3256033 | cAATCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGca < 1:872625/150‑1 (MQ=255) aGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGcaca < 2:1803961/150‑1 (MQ=255) cGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGc < 2:1587351/150‑1 (MQ=255) gCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGc < 1:778793/150‑1 (MQ=255) gggTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCTGTGCGAACGGGCCCGGctttg < 1:1683075/150‑5 (MQ=255) gggTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGAt < 2:2008881/150‑1 (MQ=255) gtCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCat < 2:914697/150‑2 (MQ=255) gACAGGTTCTTCACAAAAGCTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGTTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTAt < 2:942368/150‑1 (MQ=255) accggTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATc > 1:2401814/4‑150 (MQ=255) cAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCa < 2:2145037/150‑1 (MQ=255) cAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCa < 1:2037197/150‑1 (MQ=255) gTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGaa > 1:2135946/1‑150 (MQ=255) gTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGaa > 2:534645/1‑150 (MQ=255) gTTCTTCACAAAAACTTACCTTTTGCCATTAAATCGTCATGCATCTTTGCTTGATAATATCAGGCCAGGGCACGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGCGCCCGTTCGCACAGGCCAGGCCGATGGAAACTACCAgca > 2:467459/1‑148 (MQ=255) acaAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGtaataa < 1:93775/150‑1 (MQ=255) acaAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGtaataa < 1:1971376/150‑1 (MQ=255) caAAAACTTCCCTTTTGCCATTAAATCGTCGTGCATCTGTGCTTGATGATATCAGGACAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAg > 1:489548/1‑150 (MQ=255) caAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTCCCGCGCGATTGCCGCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAg > 2:1269317/1‑150 (MQ=255) aaaaaCTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAgg < 1:534645/150‑1 (MQ=255) aaaaCTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTc > 2:732228/1‑109 (MQ=255) aaaaCTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTc < 1:732228/109‑1 (MQ=255) cTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAgg > 1:529379/1‑150 (MQ=255) ccATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTgaaa < 2:1369906/150‑1 (MQ=255) ccATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCAGTTCGCACAGTCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTgaaa < 2:1181875/150‑1 (MQ=255) aTTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAgg > 2:1747443/1‑142 (MQ=255) aTTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAgg < 1:1747443/142‑1 (MQ=255) aTTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTgaaaga > 1:316332/1‑150 (MQ=255) aaTCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGaaaa < 1:2042106/149‑1 (MQ=255) aaTCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGaaaa > 2:2042106/1‑149 (MQ=255) aTCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGt > 2:958189/1‑150 (MQ=255) cGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCa > 2:2228674/1‑150 (MQ=255) gTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAg > 2:2207859/1‑150 (MQ=255) tCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAgg < 1:958189/150‑1 (MQ=255) cATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGt < 2:2135946/150‑1 (MQ=255) aTGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGcaca < 2:227306/86‑1 (MQ=255) aTGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGcaca > 1:227306/1‑86 (MQ=255) tGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATgg > 1:1893602/1‑99 (MQ=255) tGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATgg < 2:1893602/99‑1 (MQ=255) aTCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCTTc < 2:2401814/150‑1 (MQ=255) aTCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTc > 2:1028891/1‑150 (MQ=255) tgtgCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTCACGAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATc > 1:297397/1‑150 (MQ=255) tgtgCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAg < 2:1427055/123‑1 (MQ=255) tgtgCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAg > 1:1427055/1‑123 (MQ=255) tgtgCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATAAGCTGGTGAAAGAAAAGTCAGGTGCGTCATc < 1:1269317/150‑1 (MQ=255) cTTGATGATATAAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTc < 2:609741/150‑1 (MQ=255) ttGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGtaataa < 2:58145/107‑1 (MQ=255) ttGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGtaataa > 1:58145/1‑107 (MQ=255) ttGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCa > 2:653628/1‑150 (MQ=255) gatgatATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGa > 2:916752/1‑150 (MQ=255) gatgatATCAGGCCAGGGCAGGGAAGGCGGCCAGAATTCATACTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGa < 1:1331707/150‑1 (MQ=255) atgatATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGaaaa > 2:2355919/1‑127 (MQ=255) atgatATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGaaaa < 1:2355919/127‑1 (MQ=255) tgatATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGAcc > 2:892840/1‑150 (MQ=255) cAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGa < 2:408729/75‑1 (MQ=255) cAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGa > 1:408729/1‑75 (MQ=255) cAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAAttgt < 1:467459/150‑4 (MQ=255) aGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGTCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGAc < 1:653628/150‑1 (MQ=255) ggCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACa < 1:1028891/150‑1 (MQ=255) cagggcagggAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGt > 1:1222492/1‑150 (MQ=255) gggcagggAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGTGTCATCGGTCAGACCAATGGACAGGTTg < 1:1603496/150‑1 (MQ=255) agggAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCa > 1:2275626/1‑150 (MQ=255) gAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGa < 1:2228674/150‑1 (MQ=255) aGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCa > 2:554045/1‑108 (MQ=255) aGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCa < 1:554045/108‑1 (MQ=255) ctttggTTACAAGCCTTGTAACTAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCa > 2:1663396/6‑150 (MQ=255) gcCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCATAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAg < 2:529379/150‑1 (MQ=255) cAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGc < 1:1934524/56‑1 (MQ=255) cAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGc > 2:1934524/1‑56 (MQ=255) ggTTACAAGCCTTGTAACCAAAGCCGGGCCCGTTCGCGCAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAACGTCTGGGGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGtt > 1:1954949/2‑150 (MQ=255) ttACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTCAAAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGCCAGGCTGGGCACGATGGTCAGGTTGt > 1:525172/1‑150 (MQ=255) tACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTc < 2:1222492/150‑1 (MQ=255) cAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCgg > 1:1642708/1‑150 (MQ=255) aaGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCa > 2:1306359/1‑57 (MQ=255) aaGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCa < 1:1306359/57‑1 (MQ=255) aaGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGt > 1:690865/1‑150 (MQ=255) aaGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGt > 1:1691865/1‑150 (MQ=255) aaGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGt < 2:1642708/150‑1 (MQ=255) aGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTg > 1:1342102/1‑150 (MQ=255) ttGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTggcgg > 1:707260/1‑150 (MQ=255) tGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTggcggc > 1:1281503/1‑150 (MQ=255) tAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGa > 2:2259708/1‑150 (MQ=255) ccAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAg < 1:1440651/112‑1 (MQ=255) ccAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAg > 2:1440651/1‑112 (MQ=255) ccAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAgg > 2:171199/1‑150 (MQ=255) tcggCCGGGCCTGTGCGAACGGGCCCGGCTGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATg < 1:123649/102‑1 (MQ=37) tcggCCGGGCCTGTGCGAACGGGCCCGGCTGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATg > 2:123649/4‑105 (MQ=37) tcggCCGGGCCTGTGCGAACGGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTc > 2:1962267/4‑150 (MQ=255) aaaGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTc > 1:2130828/1‑150 (MQ=255) aGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAg < 2:1342102/150‑1 (MQ=255) cGGGCCTGTGCGAACGGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGcc > 2:555521/1‑150 (MQ=255) cGGGCCTGTGCGAACGGGCCCGGCCGATGGCAAATATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGcc > 2:177098/1‑150 (MQ=255) cGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGcc > 1:966347/1‑150 (MQ=255) ggCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGCCaa > 1:1920030/1‑150 (MQ=255) gCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATTGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGCCAat > 2:881666/1‑150 (MQ=255) cccGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGCCAata < 1:892840/150‑1 (MQ=255) ccGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATg < 1:2185222/113‑1 (MQ=255) ccGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATg > 2:2185222/1‑113 (MQ=255) | CAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAGGGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGCCAATA > NC_002947/3255744‑3256033 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |