| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,282,331 | A→G | 10.7% | L26L (CTT→CTC) | PP_2883 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,282,331 | 0 | A | G | 10.7% | 228.4 / 14.4 | 84 | L26L (CTT→CTC) | PP_2883 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (41/34); new base G (4/5); total (45/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.52e-01 | |||||||||||
CTGCCAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCTTGAAACTGT > NC_002947/3282184‑3282478 | cTGCCAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAg < 1:1980801/150‑1 (MQ=255)cTGCCAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAg < 1:1953186/150‑1 (MQ=255) ccAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAggtg < 1:1322252/150‑1 (MQ=255) tgtTCGAGGCCGGCCTGTTCCCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGc > 2:37007/1‑150 (MQ=255) gtTCGAGGCCGGCCTGTTCGCCGTCGGCGGCTTGGCAACGAACGTAATGCGCCAGGCCTTCGGTATCCAGGGCCAACTTCCGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCA‑CCACCTTGAggtggctgca < 2:1188138/150‑6 (MQ=255) gAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGcc > 2:1146081/1‑150 (MQ=255) aGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCa > 1:220319/1‑150 (MQ=255) aGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCa > 2:817611/1‑150 (MQ=255) ggccggccTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCaa < 1:981060/150‑1 (MQ=255) ggccggccTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCAGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCaa > 1:1250379/1‑150 (MQ=255) ccggccTGTTCGCCTTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCAAGGGCTAACGGCAGTTGCCAACCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAgg < 1:781818/150‑1 (MQ=255) ccggccTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGTGGCGTGCA‑CCACCTTGAGGTGGCTGCACGccgcga < 2:140069/150‑5 (MQ=38) ttCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGGCTGCAc > 1:2259733/1‑136 (MQ=255) ttCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGGCTGCAc < 2:2259733/136‑1 (MQ=255) cGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTgc > 2:92344/1‑150 (MQ=255) gCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTgcg < 1:37007/150‑1 (MQ=255) ccGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACGTCGATCAGGCCGCCATCGCGGCGTGCAGCCAAATCAAACTGC‑TATACTCCATGGGCCTCAtttttt > 1:1133504/1‑146 (MQ=255) gTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAg < 1:1633686/150‑1 (MQ=255) gTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAg > 1:1241205/1‑150 (MQ=255) ggggCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCAc < 2:843852/150‑1 (MQ=255) ggCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAgg < 2:1505138/115‑1 (MQ=255) ggCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAgg > 1:1505138/1‑115 (MQ=255) ggCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGa < 1:934622/150‑1 (MQ=255) aacgaacgCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGcc < 2:2226718/118‑1 (MQ=255) aacgaacgCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGcc > 1:2226718/1‑118 (MQ=255) aacgaacgCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACAt > 1:194242/1‑150 (MQ=255) aacgCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCg > 1:951920/1‑150 (MQ=255) acgCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCgg < 1:1558463/150‑1 (MQ=255) gCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGc < 1:1309904/150‑1 (MQ=255) aaTGCGCCAGGCCTTCGGTATCCAGGGCCACCGAACGTTGACCCGATTGGTGGACGACATCGATCAGGCCGCCGTCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGt > 1:2224542/1‑150 (MQ=255) aaTGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAg > 1:1977163/1‑97 (MQ=255) aaTGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAg < 2:1977163/97‑1 (MQ=255) tGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCATGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTc > 1:413100/1‑150 (MQ=255) ggCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGCCATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAAc < 1:92344/150‑1 (MQ=255) gCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGACGTGCAGCCACCTTAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCCTTCGATGAACg > 2:1116247/1‑150 (MQ=255) ttCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCt > 2:1858995/1‑150 (MQ=255) ttCGGTATCCAGGGCCAACGTCAGATGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCt > 1:666942/1‑150 (MQ=255) gTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTgg < 2:1241205/150‑1 (MQ=255) tATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTggg > 1:355276/1‑150 (MQ=255) ccAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCa > 2:1211203/1‑150 (MQ=255) aGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAg > 1:754994/1‑150 (MQ=255) ccAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCa > 2:1329909/1‑150 (MQ=255) ccAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCa < 2:951920/150‑1 (MQ=255) cAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAg < 1:1858995/150‑1 (MQ=255) gTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAAt > 2:422629/1‑150 (MQ=255) ccAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCtg > 2:1788026/1‑124 (MQ=255) ccAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCtg < 1:1788026/124‑1 (MQ=255) ccAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGc > 2:1095786/1‑150 (MQ=255) aGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCgt < 1:189055/150‑1 (MQ=255) gCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCgtg > 1:387679/1‑150 (MQ=255) cccTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCgtgt > 1:1726871/1‑150 (MQ=255) aTGCCGACATCGATCAGGCCGCCATCGAGGGGTGCTGCCACCGCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGgcgc < 2:194242/150‑1 (MQ=255) ccGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtga < 2:387679/150‑1 (MQ=255) ccGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtga < 1:817611/150‑1 (MQ=255) cGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCgg < 1:837526/92‑1 (MQ=255) cGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCgg > 2:837526/1‑92 (MQ=255) cGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtgat > 1:140129/1‑150 (MQ=255) gACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCtgatg > 1:144551/1‑150 (MQ=255) aTCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCgg > 1:1411197/1‑150 (MQ=255) gccgccATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAgg > 2:160826/1‑61 (MQ=255) gccgccATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAgg < 1:160826/61‑1 (MQ=255) ccgccATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTgg > 1:126159/1‑99 (MQ=255) ccgccATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTgg < 2:126159/99‑1 (MQ=255) cATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCgg < 2:1250379/150‑1 (MQ=255) tCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGc < 2:355276/150‑1 (MQ=255) ccttggcgTGCA‑CCACCTTGAGGTGGCTGCACGCCGAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGa > 1:1981264/5‑105 (MQ=25) ccttggcgTGCA‑CCACCTTGAGGTGGCTGCACGCCGAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGa > 1:1981422/5‑105 (MQ=25) ccttggcgTGCA‑CCACCTTGAGGTGGCTGCACGCCGAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGa < 2:1981422/101‑1 (MQ=25) ccttggcgTGCA‑CCACCTTGAGGTGGCTGCACGCCGAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGa < 2:1981264/101‑1 (MQ=25) ttggcgTGCA‑CCACCTTGAGGTGGCTGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCg > 1:2329023/3‑150 (MQ=255) cgTGCA‑CCACCTTGAGGTGGCTGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCgg > 2:1759807/1‑66 (MQ=18) cgTGCA‑CCACCTTGAGGTGGCTGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCgg < 1:1759807/66‑1 (MQ=18) cAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCtt < 2:1411197/150‑1 (MQ=255) aGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCTTg > 1:913970/1‑150 (MQ=255) gCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCTTGa > 1:2094809/1‑150 (MQ=255) aCCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCTGGCCGATGCTCTTGgaaa > 2:870280/1‑149 (MQ=255) aCCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGAt > 1:583889/1‑139 (MQ=255) aCCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGAt < 2:583889/139‑1 (MQ=255) cTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCtt < 2:1710984/143‑1 (MQ=255) cTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCtt > 1:1710984/1‑143 (MQ=255) cTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAAACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCTTGAAACtg > 1:1758088/1‑150 (MQ=255) tCAAGTTGC‑TGCACGCAAAGGGCCACATTGCGCAGTCACTGGTAGACTTCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGCCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCTTGAAACtgt < 1:1116247/150‑1 (MQ=255) tCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCTTGAAACtgt > 1:589847/1‑150 (MQ=255) tCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCTTGAAACtgt < 1:1095786/150‑1 (MQ=255) | CTGCCAGTGTTCGAGGCCGGCCTGTTCGCCGTCGGGGGCTTGGCAACGAACGCAATGCGCCAGGCCTTCGGTATCCAGGGCCAACGTCAGTTGCCAGCCCTGGATGCCGACATCGATCAGGCCGCCATCGCGGCGTGCAGCCACCTCAAGGTGG‑TGCACGCCAAGGGCCACATTGCGCAGGCACTGGTAGACATCCCGGGCGTTCGGTGAACGTCTGTGGGTCAAGATCAGAAATTCGCCGGCGTGTTGGCGCTGATGATCTCGGCCTCATCCGGGCCGATGTTCTTGAAACTGT > NC_002947/3282184‑3282478 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |