| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,298,073 | G→C | 6.4% | E83Q (GAG→CAG) ‡ | pvdQ → | acyl‑homoserine lactone acylase PvdQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,298,073 | 0 | G | C | 6.4% | 299.5 / 9.9 | 94 | E83Q (GAG→CAG) ‡ | pvdQ | acyl‑homoserine lactone acylase PvdQ |
| Reads supporting (aligned to +/- strand): ref base G (48/40); new base C (4/2); total (52/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.95e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
CCGACGCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCATTGCTGGCG > NC_002947/3297924‑3298222 | ccGACGCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCgtgagcggtg < 2:2406711/150‑1 (MQ=255) cGACGCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCTTTTGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCgtgagcggtga < 1:1620582/150‑1 (MQ=255) cGACGCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCgtgagcggtga < 1:439445/150‑1 (MQ=255) gACGCCAGTGCCCAGATCCGCTATACACGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTCACCgtgagcgatgaa > 2:229/1‑149 (MQ=255) gCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCgtgagcggtga > 2:2054966/1‑146 (MQ=255) gCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCgtgagcggtga < 1:2054966/146‑1 (MQ=255) gTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCAc > 1:10136/1‑150 (MQ=255) gTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCAc < 1:1670595/150‑1 (MQ=255) cccAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCt > 2:2194834/1‑150 (MQ=255) ccAGATCCGCTATACCCGTTACGGCGTACCGCATATAGTGGCCAAGGATGAGCGTGGCCTGGGCTATAGCGTCGGATATACCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTa > 2:77169/1‑150 (MQ=255) ccAGATCCGCTATACACGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCTTGGCCTGGGCTATGGCGTAGGCTATGCCTACGCCCAGGCCAACCTATGCCTTCTCGCCAATGAAGTGCTGACAGTGAGCGGTGAGCGCTGACGCTa > 2:1195041/1‑150 (MQ=255) ccGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCgg > 1:2177729/1‑150 (MQ=255) cGCTATGCCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGgc < 1:1511152/150‑1 (MQ=255) cGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTa > 2:1699710/1‑143 (MQ=255) gCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTTGGTCTCCGACCAGCCCTAATGACGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCGAACCCTATTgcggcg > 1:782853/1‑150 (MQ=255) gCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGgcg > 1:1554699/1‑150 (MQ=255) cacGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTCTGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAgg < 1:648587/148‑1 (MQ=255) ccGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATTCCTTCGGCCAGGACAACCTATGCCTGCTCGCCAGTGTAGGGCTGCCCGTGAGCGGTGAGCTCTCACGCTATTTCGGCGCCAAggg > 2:1804930/1‑150 (MQ=255) ccGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGCTCACCGCTCACg > 2:439692/1‑132 (MQ=255) ccGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGCTCACCGCTCACg < 1:439692/132‑1 (MQ=255) gCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGAccc > 2:755756/1‑150 (MQ=255) gTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTg < 1:469695/150‑1 (MQ=255) gTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGAGCCAGACCCTg < 2:154348/150‑1 (MQ=255) aCCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGa < 2:1961427/150‑1 (MQ=255) cGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAgg > 1:747335/1‑135 (MQ=255) cGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAgg < 2:747335/135‑1 (MQ=255) tCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTTAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTg > 2:328734/1‑150 (MQ=255) tCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTg > 2:1690838/1‑150 (MQ=255) cAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCt < 2:406202/132‑1 (MQ=255) cAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCt > 1:406202/1‑132 (MQ=255) cAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCt > 2:2377649/1‑150 (MQ=255) cAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCGCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCt < 1:2077838/150‑1 (MQ=255) ggATGAGCGTGGCCTGGTCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGc < 2:307321/150‑1 (MQ=255) ggATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGc < 2:285977/150‑1 (MQ=255) gATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGcc > 1:2220888/1‑150 (MQ=255) gATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGcc > 1:1313690/1‑150 (MQ=255) gAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGc < 2:2177729/150‑1 (MQ=255) cGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGAc < 1:2377649/150‑1 (MQ=255) ccTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGtt < 1:755756/150‑1 (MQ=255) cTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCAc > 2:1914394/1‑150 (MQ=255) cTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCAc < 1:2194834/150‑1 (MQ=255) gCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGc < 1:660035/150‑1 (MQ=255) gCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGATGACCGCGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATa > 2:2392501/1‑150 (MQ=255) cTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAg > 1:1002050/1‑150 (MQ=255) tGCCTACGCCCAGGACAACCTATGCCTGCACGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGccc > 2:1010523/1‑150 (MQ=255) gCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCa < 2:1313690/150‑1 (MQ=255) tACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCa > 2:1935296/1‑86 (MQ=255) tACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCa < 1:1935296/86‑1 (MQ=255) ccAGTACAACCTCTGCCTGTTCGCCAATAAAGTGCTGACAGTGAGCGGTGAGCGATCACGCTATTTCGGCGCCAAGGGCCAGCCCCTGGAGCTGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGt < 1:838234/150‑1 (MQ=255) ccAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGcggcgg < 2:538269/149‑1 (MQ=255) ccAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGcggcgg > 1:538269/1‑149 (MQ=255) ccAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGt > 2:2024528/1‑150 (MQ=255) ccAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGt > 1:218814/1‑150 (MQ=255) ccAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGt > 1:322034/1‑150 (MQ=255) gACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAAc > 1:543510/1‑99 (MQ=255) gACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAAc < 2:543510/99‑1 (MQ=255) gACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGAt < 2:1681182/150‑1 (MQ=255) gACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCAGTGTTTCATCGGGCTCGATAGCCCAGCGGGGGTCGAt > 2:396797/1‑150 (MQ=255) gACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGCTCACCGCTCACg > 2:1530463/1‑56 (MQ=25) gACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGCTCACCGCTCACg < 1:1530463/56‑1 (MQ=25) aaCCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACTCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGcc > 1:1407005/1‑150 (MQ=255) ccTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTg > 1:1757272/1‑97 (MQ=255) ccTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTg < 2:1757272/97‑1 (MQ=255) cTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTc > 2:2274252/1‑150 (MQ=255) tATGCCTGCTCGCCAATGAAGTGCTGACCGGGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTcc > 1:1644161/1‑150 (MQ=255) gCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTAttt < 1:92172/52‑1 (MQ=255) ccTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGc > 1:1850941/1‑93 (MQ=255) ccTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGc < 2:1850941/93‑1 (MQ=255) cTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTg < 2:595713/102‑1 (MQ=255) cTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTg > 1:595713/1‑102 (MQ=255) cTGCTCGCCAATGAAGTGCTGACCGATCTCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAg < 1:229/150‑1 (MQ=255) cTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGgcg < 1:1882105/150‑1 (MQ=255) cTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACACTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGgcg > 1:1552583/1‑150 (MQ=255) gCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCaa > 2:2292204/1‑150 (MQ=255) gCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCaa > 2:2348598/1‑150 (MQ=255) gCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGAAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTACTGCAGGCGCaa > 2:448025/1‑150 (MQ=255) cAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGc > 1:746625/1‑107 (MQ=255) cAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGc < 2:746625/107‑1 (MQ=255) cAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAAcc > 2:1905354/1‑150 (MQ=255) aaTGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAAccc > 2:1743797/1‑150 (MQ=255) aTGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCcg > 1:896385/1‑150 (MQ=255) tGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGa < 1:384957/63‑1 (MQ=255) tGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAg < 2:1015437/84‑1 (MQ=255) tGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAg > 1:1015437/1‑84 (MQ=255) tGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCcgc < 1:2274252/150‑1 (MQ=255) gTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCg > 2:1188080/1‑150 (MQ=255) tGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGtt < 2:702138/88‑1 (MQ=255) tGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGtt > 1:702138/1‑88 (MQ=255) gACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCa > 1:2406335/1‑150 (MQ=255) gACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCCGCAGGCGCAACCCGCGTCGGTGCa < 2:1554699/150‑1 (MQ=255) aCCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACACCCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAg < 1:1077235/150‑1 (MQ=255) cGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCcgc > 1:533656/1‑138 (MQ=255) cGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCcgc < 2:533656/138‑1 (MQ=255) cGTGAGCGCTCACCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGc > 1:2021693/1‑150 (MQ=255) cGTGAGCGCTCACCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGc > 2:570352/1‑150 (MQ=255) gtgagcggtgagcgCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCa > 1:1189077/1‑150 (MQ=255) gtgagcgCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCATTGCTgg > 1:877382/1‑150 (MQ=255) gagcgCTCACTCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCATTGCTGGCg < 2:1407005/150‑1 (MQ=255) gagcgCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACACACTGGCCGGGGACCGGTGCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCATTGCTGGCg < 1:2349388/150‑1 (MQ=255) gagcgCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCATTGCTGGCg < 1:1690838/150‑1 (MQ=255) | CCGACGCCAGTGCCCAGATCCGCTATACCCGTTACGGCGTACCGCATATCGTGGCCAAGGATGAGCGTGGCCTGGGCTATGGCGTCGGCTATGCCTACGCCCAGGACAACCTATGCCTGCTCGCCAATGAAGTGCTGACCGTGAGCGGTGAGCGCTCACGCTATTTCGGCGCCAAGGGCCAGACCCTGGAGCAGCGTGACAACCTGGCCAGCGACCTGTTCTTCACCTGGCTCAATAGCCCAGCGGCGGTCGATGCCTTCCTGCAGGCGCAACCCGCGTCGGTGCAGGCATTGCTGGCG > NC_002947/3297924‑3298222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |