BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,396,949	C→A	6.5%	L206M (CTG→ATG) ‡	PP_3001 →	CAIB/BAIF family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,396,949	0	C	A	6.5%	384.9 / 9.9	122	L206M (CTG→ATG) ‡	PP_3001	CAIB/BAIF family protein
Reads supporting (aligned to +/- strand): ref base C (52/62); new base A (3/5); total (55/67)
Fisher's exact test for biased strand distribution p-value = 7.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.23e-01

Only 100 of 126 total aligned reads displayed.

GTGCCGGGCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAGGTC  >  NC_002947/3396802‑3397098

gTGCCGGGCGAGGCACCGCCTCTGCTGCGTATTTCCCTAGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTg                                                                                                                                                     >  2:697734/1‑150 (MQ=255)

gTGCCGGGCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGCCACCCTg                                                                                                                                                     <  2:1348806/150‑1 (MQ=255)

gTGCCGGGCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTg                                                                                                                                                     >  1:1919012/1‑150 (MQ=255)

       gCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGa                                                                                                                                              <  2:471511/150‑1 (MQ=255)

          aGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCAGGGTGTCgtaca                                                                                                                                           <  2:1098371/150‑5 (MQ=255)

          aGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCAGGGTGTCgtaca                                                                                                                                           <  2:1241627/150‑5 (MQ=255)

           ggCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCa                                                                                                                                          <  1:1381410/150‑1 (MQ=255)

            gccccgccgCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGATTAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACATCCTGGTGTAGATGCAc                                                                                                                                         <  2:1302439/147‑1 (MQ=255)

            gCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCAc                                                                                                                                         <  2:1919012/150‑1 (MQ=255)

            gCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCAc                                                                                                                                         <  2:1922087/150‑1 (MQ=255)

            gCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCAc                                                                                                                                         >  2:918882/1‑150 (MQ=255)

              aCCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGa                                                                                                                                       >  1:1304125/1‑150 (MQ=255)

                  ccgcTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATAc                                                                                                                                   <  1:382260/150‑1 (MQ=255)

                     ctgctgCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATAcgcg                                                                                                                                <  1:2379828/150‑1 (MQ=255)

                     ctgctgCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATAGCCATGTCGCTGTACGACACCCTGGTGTCGATGCACGAATAcgcg                                                                                                                                <  1:2362004/150‑1 (MQ=255)

                      tgctgcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCgg                                                                                                                               <  2:2006866/150‑1 (MQ=255)

                      tgctgcGTATTTCCCTAGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGAGTGAGCAGTGGCCGTGGGCAGCACATCGACATTGCGCTGTTCGACACCCTCGTGTCGATGCACGAATAcgctg                                                                                                                               <  1:1391554/150‑3 (MQ=255)

                        ctgcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTg                                                                                                                             <  1:1264363/150‑1 (MQ=255)

                        ctgcGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTg                                                                                                                             >  2:710495/1‑150 (MQ=255)

                            gTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAgt                                                                                                                         <  1:1033531/150‑1 (MQ=255)

                            gTATTGCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAgt                                                                                                                         <  1:918882/150‑1 (MQ=255)

                              aTTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAgtgt                                                                                                                       >  1:2284223/1‑150 (MQ=255)

                                   ccTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTacac                                                                                                                  >  1:794422/1‑150 (MQ=255)

                                   ccTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTacac                                                                                                                  <  1:1386166/150‑1 (MQ=255)

                                   ccTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCAGGGTGTCgtacagc                                                                                                                                         >  2:778534/1‑121 (MQ=255)

                                   ccTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATACCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTacac                                                                                                                  >  1:1051855/1‑150 (MQ=255)

                                    cTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACg                                                                                                                 <  1:2301855/150‑1 (MQ=255)

                                    cTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACg                                                                                                                 >  1:4256/1‑150 (MQ=255)

                                       ggCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGACCCGGACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTg                                                                                                              <  1:1979312/150‑1 (MQ=255)

                                        gCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTg                                                                                                                             >  2:1413066/1‑134 (MQ=255)

                                        gCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGt                                                                                                             >  2:772824/1‑150 (MQ=255)

                                             aTGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGt                                                                                                        >  2:2197776/1‑150 (MQ=255)

                                              tGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTg                                                                                                       >  1:79349/1‑150 (MQ=255)

                                              tGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTg                                                                                                       <  1:1297257/150‑1 (MQ=255)

                                               gTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCTGCCGTTTGAGCAGTGGCCGTGGCCAGCACCTAGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTgg                                                                                                      >  1:2350059/1‑150 (MQ=255)

                                               gTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGtt                                                                                                                      <  1:1520061/134‑1 (MQ=255)

                                               gTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGtt                                                                                                                      >  2:1520061/1‑134 (MQ=255)

                                                tACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATa                                                                                                                                    <  1:570623/119‑1 (MQ=255)

                                                tACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATa                                                                                                                                    >  2:570623/1‑119 (MQ=255)

                                                  cacCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACCCTGTCCGGTgcccc                                                                                                   >  2:870436/1‑146 (MQ=255)

                                                   acCGGCATCACCGCGGAGGCGGCGATCAATGCCCCGCTACTCGACCAGGGAAGCAGTGGCCGCGGCCAGCACATCGACATGGCGCAGTAAGACACCCCGCTGTCACTACACGCATACGCGGTACAGTGTTCCACGATGTACGGTGGCAcc                                                                                                  >  2:379866/1‑149 (MQ=255)

                                                     cGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACtgt                                                                                                <  2:2261209/150‑1 (MQ=255)

                                                     cGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACtgt                                                                                                <  1:2197776/150‑1 (MQ=255)

                                                     cGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACtgt                                                                                                >  1:2013854/1‑150 (MQ=255)

                                                     cGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACtgt                                                                                                <  1:945008/150‑1 (MQ=255)

                                                     cGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCCTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACtgt                                                                                                >  2:801109/1‑150 (MQ=255)

                                                       gCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTgtgt                                                                                              >  1:1722770/1‑150 (MQ=255)

                                                           ccACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGcc                                                                                          <  1:710495/150‑1 (MQ=255)

                                                             aCGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAgt                                                                                                                         >  1:746928/1‑117 (MQ=255)

                                                                 ggTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCcagca                                                                                    <  1:1272697/150‑1 (MQ=255)

                                                                   tGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGa                                                                                  <  2:2226407/150‑1 (MQ=255)

                                                                          gATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGAGTTACACGCTGTCCGGTGGCACTGCGCTGCCCCAGCAGACCGGCCa                                                                           >  2:464507/1‑150 (MQ=255)

                                                                            tCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCTGTGGCAc                                                                                                   <  2:235863/124‑1 (MQ=255)

                                                                            tCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCTGTGGCAc                                                                                                   >  1:235863/1‑124 (MQ=255)

                                                                             cAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGCCCGGCCACGa                                                                        <  2:2211615/150‑1 (MQ=255)

                                                                             cAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGa                                                                        <  2:79349/150‑1 (MQ=255)

                                                                                 gCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATg                                                                    <  2:2284223/150‑1 (MQ=255)

                                                                                    gcgcTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGccc                                                                 <  1:1443152/150‑1 (MQ=255)

                                                                                    gcgcTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGccc                                                                 <  1:1537162/150‑1 (MQ=255)

                                                                                       ctgctCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCAcc                                                              <  1:830976/150‑1 (MQ=255)

                                                                                         gctCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTc                                                            <  1:697734/150‑1 (MQ=255)

                                                                                          ctCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCcag                                                                                      <  1:811843/123‑1 (MQ=255)

                                                                                            cGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACg                                                                                                                 >  2:215083/1‑94 (MQ=255)

                                                                                              gCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGAccc                                                       >  2:202604/1‑150 (MQ=255)

                                                                                                         aGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGa                                                                        <  1:1035963/122‑1 (MQ=255)

                                                                                                         aGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGa                                                                        >  2:1035963/1‑122 (MQ=255)

                                                                                                          gtggccgtggccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCgtgt                                           >  1:1710376/1‑150 (MQ=255)

                                                                                                           tggccgtggccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCGCGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCg                                              <  1:1494883/146‑1 (MQ=255)

                                                                                                           tggccgtggccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCGCGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCg                                              >  2:1494883/1‑146 (MQ=255)

                                                                                                             gccgtggccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTcc                                        >  2:1126042/1‑150 (MQ=255)

                                                                                                               cgtggccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCcgc                                      <  2:1938913/150‑1 (MQ=255)

                                                                                                               cgtggccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCcgc                                      <  1:1095545/150‑1 (MQ=255)

                                                                                                                   gccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTTGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCa                                  >  2:1087059/1‑150 (MQ=255)

                                                                                                                    ccAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCAc                                 <  1:772824/150‑1 (MQ=255)

                                                                                                                     cAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCAcc                                >  1:1343587/1‑150 (MQ=255)

                                                                                                                           aTCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCCCCTCGACCCCGTACGGCGTGTTCCGCGCCCCCCACCGc                          >  2:696922/1‑150 (MQ=255)

                                                                                                                           aTCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCgt                                             >  1:2231264/1‑131 (MQ=255)

                                                                                                                           aTCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGc                          >  1:2145498/1‑150 (MQ=255)

                                                                                                                           aTCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCCACGGc                          >  2:1167545/1‑150 (MQ=255)

                                                                                                                           aTCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACAAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACgtc                          >  2:1420767/1‑148 (MQ=255)

                                                                                                                            tCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGcc                         >  2:1805389/1‑149 (MQ=255)

                                                                                                                            tCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCg                         >  2:1804757/1‑150 (MQ=255)

                                                                                                                               aCATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGAcc                      >  1:1087062/1‑150 (MQ=255)

                                                                                                                                 aTGGCGCTGTACGACACCCTGGTGTGGATGCACGAATACGCGGTACAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTGCCGCGCCACCGACGGCGAcccg                    <  2:1735569/150‑3 (MQ=255)

                                                                                                                                 aTGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTg                    <  2:1722770/150‑1 (MQ=255)

                                                                                                                                 aTGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTg                    <  2:1087062/150‑1 (MQ=255)

                                                                                                                                  tGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGAAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTgg                   <  1:872149/150‑1 (MQ=255)

                                                                                                                                   ggCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGt                  <  2:1566249/150‑1 (MQ=255)

                                                                                                                                   ggCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGt                  <  2:2013854/150‑1 (MQ=255)

                                                                                                                                      gcTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGAt               >  2:43890/1‑150 (MQ=255)

                                                                                                                                      gcTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACATTGACTCTGTAACACACGTCTCGCACCACCGACGGCCACCTGGGGAt               >  2:265381/1‑150 (MQ=255)

                                                                                                                                        tGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGcc                                                                                          <  1:1162380/73‑1 (MQ=255)

                                                                                                                                        tGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGcc                                                                                          >  2:1162380/1‑73 (MQ=255)

                                                                                                                                          tACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCTCGCCACCGACGGCGACCTGGTGATcgcc           >  2:1555561/1‑150 (MQ=255)

                                                                                                                                          atcGACACCAGGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGc                                               >  1:1029557/3‑114 (MQ=255)

                                                                                                                                              acacCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGccc       >  2:915849/1‑150 (MQ=255)

                                                                                                                                                acCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAg     >  2:1894311/1‑150 (MQ=255)

                                                                                                                                                  ccTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGa                        >  1:1889201/1‑129 (MQ=255)

                                                                                                                                                  ccTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAGGt   >  1:55167/1‑150 (MQ=255)

                                                                                                                                                   cTGGTGTTGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAGGTc  <  1:1087059/150‑1 (MQ=255)

GTGCCGGGCGAGGCACCGCCGCTGCTGCGTATTTCCCTGGGCGACATGTACACCGGCATCCACGCGGTGGCGGCGATCAATGCCGCGCTGCTCGGCCGGGTGAGCAGTGGCCGTGGCCAGCACATCGACATGGCGCTGTACGACACCCTGGTGTCGATGCACGAATACGCGGTGCAGTGTTACACGCTGTCCGGTGGCACTGTGTTGCCCCAGCAGACCGGCCACGACATGCCCACCTCGACCCTGTACGGCGTGTTCCGCGCCACCGACGGCGACCTGGTGATCGCCGCCCAGGTC  >  NC_002947/3396802‑3397098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`